CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 778 & Codon = aTc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12778S778IS5170InonsynaGcaTc22210.95454515772-15774

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12778S778IaGcaTc2122All0.000004
ORF1ab/nsp12778S778IaGcaTc66AY.40.000009
ORF1ab/nsp12778S778IaGcaTc33B.1.617.20.000011
ORF1ab/nsp12778S778IaGcaTc120.055556
ORF1ab/nsp12778S778IaGcaTc22AY.1030.000012
ORF1ab/nsp12778S778IaGcaTc22B.10.000018
ORF1ab/nsp12778S778IaGcaTc11AY.140.000088
ORF1ab/nsp12778S778IaGcaTc11AY.4.20.000022
ORF1ab/nsp12778S778IaGcaTc11B0.000128
ORF1ab/nsp12778S778IaGcaTc11B.1.1.3010.001179
ORF1ab/nsp12778S778IaGcaTc11B.1.1.70.000001
ORF1ab/nsp12778S778IaGcaTc11B.1.177.230.003236
ORF1ab/nsp12778S778IaGcaTc11B.6.60.000889