CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 764

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12764V764VV5156VsyngtGgtT160013880.867515730-15732
ORF1ab/nsp12764V764VV5156VsyngtGgtA16002110.13187515730-15732
ORF1ab/nsp12764V764VV5156VsyngtGgtC160010.00062515730-15732
ORF1ab/nsp12764V764LV5156LnonsynGtgTtg25170.6815730-15732
ORF1ab/nsp12764V764LV5156LnonsynGtgCtg2580.3215730-15732
ORF1ab/nsp12764V764delV5156deldelGTG---1717115730-15732
ORF1ab/nsp12764V764del1V5156del1delGtg-tg760.85714315730-15732
ORF1ab/nsp12764V764GV5156GnonsyngTggGg760.85714315730-15732
ORF1ab/nsp12764V764GV5156GnonsyngTGgGT710.14285715730-15732
ORF1ab/nsp12764V764del1V5156del1delgTgg-g710.14285715730-15732
ORF1ab/nsp12764V764AV5156AnonsyngTggCg640.66666715730-15732
ORF1ab/nsp12764V764FV5156FnonsynGtGTtC630.515730-15732
ORF1ab/nsp12764V764FV5156FnonsynGtGTtT630.515730-15732
ORF1ab/nsp12764V764AV5156AnonsyngTGgCT620.33333315730-15732
ORF1ab/nsp12764V764MV5156MnonsynGtgAtg33115730-15732
ORF1ab/nsp12764V764CV5156CnonsynGTGTGT11115730-15732
ORF1ab/nsp12764V764WV5156WnonsynGTgTGg11115730-15732
ORF1ab/nsp12764V764EV5156EnonsyngTggAg11115730-15732

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12764V764VgtGgtT13881600All0.000265
ORF1ab/nsp12764V764VgtGgtA2111600All0.00004
ORF1ab/nsp12764V764VgtGgtC11600All0
ORF1ab/nsp12764V764VgtGgtT444470B.1.617.20.001672
ORF1ab/nsp12764V764VgtGgtA26470B.1.617.20.000098
ORF1ab/nsp12764V764VgtGgtT131141B.1.1.70.000117
ORF1ab/nsp12764V764VgtGgtA10141B.1.1.70.000009
ORF1ab/nsp12764V764VgtGgtT127127B.1.415.10.962121
ORF1ab/nsp12764V764VgtGgtA66125AY.40.000103
ORF1ab/nsp12764V764VgtGgtT59125AY.40.000092
ORF1ab/nsp12764V764VgtGgtT8181AY.1170.006846
ORF1ab/nsp12764V764VgtGgtT6666B.1.4150.942857
ORF1ab/nsp12764V764VgtGgtT5659B.1.20.000493
ORF1ab/nsp12764V764VgtGgtA359B.1.20.000026
ORF1ab/nsp12764V764VgtGgtT5757B.1.177.600.012451
ORF1ab/nsp12764V764VgtGgtT2643AY.430.000115
ORF1ab/nsp12764V764VgtGgtA1743AY.430.000075
ORF1ab/nsp12764V764VgtGgtA3335AY.1030.000205
ORF1ab/nsp12764V764VgtGgtT235AY.1030.000012
ORF1ab/nsp12764V764VgtGgtT3434B.1.2210.002415
ORF1ab/nsp12764V764VgtGgtT2828B.1.177.160.018605
ORF1ab/nsp12764V764LGtgTtg1725All0.000003
ORF1ab/nsp12764V764LGtgCtg825All0.000002
ORF1ab/nsp12764V764VgtGgtT2224B.10.000202
ORF1ab/nsp12764V764VgtGgtA124B.10.000009
ORF1ab/nsp12764V764VgtGgtC124B.10.000009
ORF1ab/nsp12764V764VgtGgtT1818AY.290.000284
ORF1ab/nsp12764V764delGTG---1717All0.000003
ORF1ab/nsp12764V764VgtGgtT714AY.250.000042
ORF1ab/nsp12764V764VgtGgtA714AY.250.000042
ORF1ab/nsp12764V764VgtGgtT1414B.1.1.5190.000556
ORF1ab/nsp12764V764VgtGgtT1313B.1.5650.010535
ORF1ab/nsp12764V764VgtGgtT912AY.440.000055
ORF1ab/nsp12764V764VgtGgtA312AY.440.000018
ORF1ab/nsp12764V764VgtGgtA812B.1.1770.000105
ORF1ab/nsp12764V764VgtGgtT412B.1.1770.000053
ORF1ab/nsp12764V764VgtGgtT1212P.10.000189
ORF1ab/nsp12764V764VgtGgtT1011AY.390.000247
ORF1ab/nsp12764V764VgtGgtA111AY.390.000025
ORF1ab/nsp12764V764VgtGgtT1111B.1.177.820.005251
ORF1ab/nsp12764V764VgtGgtT99AY.620.003922
ORF1ab/nsp12764V764del1Gtg-tg67All0.000001
ORF1ab/nsp12764V764GgTggGg67All0.000001
ORF1ab/nsp12764V764GgTGgGT17All0
ORF1ab/nsp12764V764del1gTgg-g17All0
ORF1ab/nsp12764V764VgtGgtT77B.1.617.10.000903
ORF1ab/nsp12764V764AgTggCg46All0.000001
ORF1ab/nsp12764V764FGtGTtT36All0.000001
ORF1ab/nsp12764V764FGtGTtC36All0.000001
ORF1ab/nsp12764V764AgTGgCT26All0
ORF1ab/nsp12764V764VgtGgtT66AY.16.10.00282
ORF1ab/nsp12764V764VgtGgtA66AY.5.40.00166
ORF1ab/nsp12764V764VgtGgtT56B.1.10.000091
ORF1ab/nsp12764V764VgtGgtA16B.1.10.000018
ORF1ab/nsp12764V764VgtGgtT66B.1.1600.000187
ORF1ab/nsp12764V764VgtGgtT550.277778
ORF1ab/nsp12764V764FGtGTtT350.166667
ORF1ab/nsp12764V764FGtGTtC250.111111
ORF1ab/nsp12764V764VgtGgtT55AY.190.005701
ORF1ab/nsp12764V764VgtGgtT55AY.50.000103
ORF1ab/nsp12764V764delGTG---55B.1.1.70.000004
ORF1ab/nsp12764V764VgtGgtT55B.1.2290.048544
ORF1ab/nsp12764V764VgtGgtA44AY.1060.00134
ORF1ab/nsp12764V764VgtGgtA24AY.30.00002
ORF1ab/nsp12764V764VgtGgtT24AY.30.00002
ORF1ab/nsp12764V764VgtGgtT44AY.400.003857
ORF1ab/nsp12764V764VgtGgtA44B.1.36.290.002069
ORF1ab/nsp12764V764VgtGgtT44B.1.3960.002823
ORF1ab/nsp12764V764LGtgTtg330.166667
ORF1ab/nsp12764V764MGtgAtg33All0.000001
ORF1ab/nsp12764V764VgtGgtT33AY.100.00159
ORF1ab/nsp12764V764VgtGgtT33AY.1100.000338
ORF1ab/nsp12764V764VgtGgtT33AY.380.001498
ORF1ab/nsp12764V764VgtGgtT33AY.610.000314
ORF1ab/nsp12764V764VgtGgtT33AY.75.10.000541
ORF1ab/nsp12764V764VgtGgtA33B.1.1.10.00098
ORF1ab/nsp12764V764AgTGgCT220.111111
ORF1ab/nsp12764V764GgTggGg120.055556
ORF1ab/nsp12764V764GgTGgGT120.055556
ORF1ab/nsp12764V764VgtGgtT22AY.1020.000053
ORF1ab/nsp12764V764VgtGgtT22AY.200.000078
ORF1ab/nsp12764V764VgtGgtA22AY.3.10.000171
ORF1ab/nsp12764V764VgtGgtA22AY.4.20.000043
ORF1ab/nsp12764V764LGtgTtg22AY.440.000012
ORF1ab/nsp12764V764VgtGgtT22AY.460.000208
ORF1ab/nsp12764V764VgtGgtA12AY.470.000031
ORF1ab/nsp12764V764VgtGgtT12AY.470.000031
ORF1ab/nsp12764V764VgtGgtT22AY.500.001599
ORF1ab/nsp12764V764VgtGgtT22AY.580.001815
ORF1ab/nsp12764V764VgtGgtT22AY.60.000082
ORF1ab/nsp12764V764VgtGgtT22AY.750.000112
ORF1ab/nsp12764V764VgtGgtT22AY.9.10.000167
ORF1ab/nsp12764V764VgtGgtT22AY.9.20.000073
ORF1ab/nsp12764V764VgtGgtT22AY.940.000885
ORF1ab/nsp12764V764VgtGgtT12AY.980.000079
ORF1ab/nsp12764V764VgtGgtA12AY.980.000079
ORF1ab/nsp12764V764LGtgTtg22B.10.000018
ORF1ab/nsp12764V764delGTG---22B.10.000018
ORF1ab/nsp12764V764MGtgAtg22B.10.000018
ORF1ab/nsp12764V764LGtgCtg22B.1.10.000036
ORF1ab/nsp12764V764AgTggCg22B.1.1.70.000002
ORF1ab/nsp12764V764GgTggGg22B.1.1.70.000002
ORF1ab/nsp12764V764LGtgCtg12B.1.1.70.000001
ORF1ab/nsp12764V764LGtgTtg12B.1.1.70.000001
ORF1ab/nsp12764V764VgtGgtT22B.1.1950.01005
ORF1ab/nsp12764V764del1Gtg-tg22B.1.20.000018
ORF1ab/nsp12764V764VgtGgtT22B.1.2430.000139
ORF1ab/nsp12764V764VgtGgtT22B.1.3510.000059
ORF1ab/nsp12764V764VgtGgtT22B.1.3890.002004
ORF1ab/nsp12764V764VgtGgtT22B.1.4270.000101
ORF1ab/nsp12764V764LGtgTtg12B.1.4270.00005
ORF1ab/nsp12764V764LGtgCtg12B.1.4270.00005
ORF1ab/nsp12764V764VgtGgtT12B.1.4290.000024
ORF1ab/nsp12764V764VgtGgtA12B.1.4290.000024
ORF1ab/nsp12764V764VgtGgtT22B.1.5260.000047
ORF1ab/nsp12764V764VgtGgtT22B.1.6090.000959
ORF1ab/nsp12764V764del1gTgg-g12B.1.617.20.000004
ORF1ab/nsp12764V764del1Gtg-tg12B.1.617.20.000004
ORF1ab/nsp12764V764VgtGgtT12B.1.6210.000089
ORF1ab/nsp12764V764VgtGgtA12B.1.6210.000089
ORF1ab/nsp12764V764CGTGTGT110.055556
ORF1ab/nsp12764V764WGTgTGg110.055556
ORF1ab/nsp12764V764VgtGgtT11A0.000387
ORF1ab/nsp12764V764WGTgTGg11All0
ORF1ab/nsp12764V764CGTGTGT11All0
ORF1ab/nsp12764V764EgTggAg11All0
ORF1ab/nsp12764V764VgtGgtT11AY.1080.001103
ORF1ab/nsp12764V764VgtGgtT11AY.110.001339
ORF1ab/nsp12764V764VgtGgtT11AY.1160.000287
ORF1ab/nsp12764V764delGTG---11AY.1180.000063
ORF1ab/nsp12764V764LGtgCtg11AY.1180.000063
ORF1ab/nsp12764V764VgtGgtT11AY.1200.000037
ORF1ab/nsp12764V764VgtGgtT11AY.1210.000135
ORF1ab/nsp12764V764VgtGgtA11AY.230.00007
ORF1ab/nsp12764V764VgtGgtA11AY.270.000065
ORF1ab/nsp12764V764VgtGgtT11AY.300.000396
ORF1ab/nsp12764V764del1Gtg-tg11AY.39.10.00004
ORF1ab/nsp12764V764LGtgTtg11AY.40.000002
ORF1ab/nsp12764V764GgTggGg11AY.40.000002
ORF1ab/nsp12764V764delGTG---11AY.40.000002
ORF1ab/nsp12764V764VgtGgtT11AY.410.000294
ORF1ab/nsp12764V764LGtgCtg11AY.430.000004
ORF1ab/nsp12764V764AgTggCg11AY.430.000004
ORF1ab/nsp12764V764delGTG---11AY.430.000004
ORF1ab/nsp12764V764del1Gtg-tg11AY.440.000006
ORF1ab/nsp12764V764VgtGgtT11AY.46.20.000635
ORF1ab/nsp12764V764LGtgTtg11AY.46.40.000165
ORF1ab/nsp12764V764VgtGgtT11AY.46.60.000072
ORF1ab/nsp12764V764LGtgTtg11AY.50.000021
ORF1ab/nsp12764V764LGtgTtg11AY.530.000288
ORF1ab/nsp12764V764VgtGgtT11AY.550.000917
ORF1ab/nsp12764V764VgtGgtT11AY.590.00053
ORF1ab/nsp12764V764delGTG---11AY.670.000464
ORF1ab/nsp12764V764VgtGgtT11AY.680.000274
ORF1ab/nsp12764V764VgtGgtT11AY.7.10.000113
ORF1ab/nsp12764V764VgtGgtT11AY.710.000475
ORF1ab/nsp12764V764VgtGgtT11AY.720.001361
ORF1ab/nsp12764V764VgtGgtA11AY.90.000068
ORF1ab/nsp12764V764delGTG---11AY.90.000068
ORF1ab/nsp12764V764VgtGgtT11AY.930.000273
ORF1ab/nsp12764V764delGTG---11AY.99.10.001553
ORF1ab/nsp12764V764VgtGgtT11AY.99.20.000092
ORF1ab/nsp12764V764GgTggGg11B.10.000009
ORF1ab/nsp12764V764FGtGTtC11B.1.10.000018
ORF1ab/nsp12764V764VgtGgtT11B.1.1.2160.00089
ORF1ab/nsp12764V764VgtGgtA11B.1.1.2580.003257
ORF1ab/nsp12764V764VgtGgtT11B.1.1.3030.002762
ORF1ab/nsp12764V764VgtGgtT11B.1.1.3480.000796
ORF1ab/nsp12764V764VgtGgtT11B.1.1.3760.005952
ORF1ab/nsp12764V764VgtGgtA11B.1.1.4320.001266
ORF1ab/nsp12764V764VgtGgtT11B.1.1.630.000386
ORF1ab/nsp12764V764VgtGgtT11B.1.1.700.000341
ORF1ab/nsp12764V764VgtGgtT11B.1.1080.005814
ORF1ab/nsp12764V764LGtgCtg11B.1.140.017544
ORF1ab/nsp12764V764GgTggGg11B.1.1620.005025
ORF1ab/nsp12764V764VgtGgtT11B.1.177.40.000211
ORF1ab/nsp12764V764VgtGgtT11B.1.177.500.004695
ORF1ab/nsp12764V764VgtGgtT11B.1.177.750.001041
ORF1ab/nsp12764V764VgtGgtT11B.1.177.850.005435
ORF1ab/nsp12764V764MGtgAtg11B.1.20.000009
ORF1ab/nsp12764V764delGTG---11B.1.20.000009
ORF1ab/nsp12764V764VgtGgtT11B.1.2270.047619
ORF1ab/nsp12764V764VgtGgtT11B.1.2320.000537
ORF1ab/nsp12764V764VgtGgtT11B.1.2340.000132
ORF1ab/nsp12764V764VgtGgtA11B.1.2390.001221
ORF1ab/nsp12764V764VgtGgtT11B.1.2410.000812
ORF1ab/nsp12764V764VgtGgtA11B.1.3460.001311
ORF1ab/nsp12764V764LGtgTtg11B.1.3510.00003
ORF1ab/nsp12764V764LGtgCtg11B.1.351.30.000876
ORF1ab/nsp12764V764LGtgTtg11B.1.360.000146
ORF1ab/nsp12764V764VgtGgtT11B.1.36.80.001
ORF1ab/nsp12764V764LGtgTtg11B.1.3960.000706
ORF1ab/nsp12764V764AgTggCg11B.1.4290.000024
ORF1ab/nsp12764V764VgtGgtT11B.1.5610.000397
ORF1ab/nsp12764V764LGtgTtg11B.1.617.20.000004
ORF1ab/nsp12764V764delGTG---11B.1.617.20.000004
ORF1ab/nsp12764V764VgtGgtT11B.1.621.10.000506
ORF1ab/nsp12764V764VgtGgtT11B.1.6280.000352
ORF1ab/nsp12764V764VgtGgtT11B.1.780.008547
ORF1ab/nsp12764V764VgtGgtT11B.40.002208
ORF1ab/nsp12764V764delGTG---11C.170.055556
ORF1ab/nsp12764V764EgTggAg11D.20.000075
ORF1ab/nsp12764V764VgtGgtA11D.20.000075
ORF1ab/nsp12764V764VgtGgtT11P.20.000187
ORF1ab/nsp12764V764VgtGgtT11Q.10.000126
ORF1ab/nsp12764V764delGTG---11Q.10.000126
ORF1ab/nsp12764V764del1Gtg-tg11Q.80.000165