CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 744 & Codon = gaT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12744E744DE5136DnonsyngaGgaT696868590.98435715670-15672

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12744E744DgaGgaT68596968All0.001312
ORF1ab/nsp12744E744DgaGgaT12831358B.1.1.70.001149
ORF1ab/nsp12744E744DgaGgaT10971098B.1.617.20.004131
ORF1ab/nsp12744E744DgaGgaT681683AY.430.003017
ORF1ab/nsp12744E744DgaGgaT526526AY.1030.003266
ORF1ab/nsp12744E744DgaGgaT430433AY.40.000669
ORF1ab/nsp12744E744DgaGgaT201201B.1.5680.223333
ORF1ab/nsp12744E744DgaGgaT193193AY.420.007764
ORF1ab/nsp12744E744DgaGgaT179179B.1.5640.076235
ORF1ab/nsp12744E744DgaGgaT176176B.1.177.70.029014
ORF1ab/nsp12744E744DgaGgaT120125AY.440.00073
ORF1ab/nsp12744E744DgaGgaT9999AY.4.20.002147
ORF1ab/nsp12744E744DgaGgaT8990B.1.20.000784
ORF1ab/nsp12744E744DgaGgaT7980AY.1020.002095
ORF1ab/nsp12744E744DgaGgaT6969AY.1170.005832
ORF1ab/nsp12744E744DgaGgaT6262AY.290.000978
ORF1ab/nsp12744E744DgaGgaT5960P.10.000929
ORF1ab/nsp12744E744DgaGgaT5757AY.390.001409
ORF1ab/nsp12744E744DgaGgaT5454AY.50.001115
ORF1ab/nsp12744E744DgaGgaT4949AY.250.000295
ORF1ab/nsp12744E744DgaGgaT4646B.1.6370.003361
ORF1ab/nsp12744E744DgaGgaT4444AY.9.20.001616
ORF1ab/nsp12744E744DgaGgaT4043B.1.3510.001189
ORF1ab/nsp12744E744DgaGgaT4041AY.200.001555
ORF1ab/nsp12744E744DgaGgaT4141AY.260.001161
ORF1ab/nsp12744E744DgaGgaT4041AY.30.000398
ORF1ab/nsp12744E744DgaGgaT3939AY.5.30.013158
ORF1ab/nsp12744E744DgaGgaT3737P.1.130.033243
ORF1ab/nsp12744E744DgaGgaT3636B.1.1.3550.553846
ORF1ab/nsp12744E744DgaGgaT3636B.1.177.170.029557
ORF1ab/nsp12744E744DgaGgaT3636B.1.2210.002557
ORF1ab/nsp12744E744DgaGgaT3333AY.4.40.013502
ORF1ab/nsp12744E744DgaGgaT2931B.10.000266
ORF1ab/nsp12744E744DgaGgaT2929AY.330.001937
ORF1ab/nsp12744E744DgaGgaT2425B.1.10.000435
ORF1ab/nsp12744E744DgaGgaT2424B.1.1.3690.01071
ORF1ab/nsp12744E744DgaGgaT2424B.1.4290.000565
ORF1ab/nsp12744E744DgaGgaT1919AY.1200.000706
ORF1ab/nsp12744E744DgaGgaT1919AY.470.000591
ORF1ab/nsp12744E744DgaGgaT1919AY.690.003547
ORF1ab/nsp12744E744DgaGgaT1718AY.98.10.000823
ORF1ab/nsp12744E744DgaGgaT1717AY.1190.0006
ORF1ab/nsp12744E744DgaGgaT1717B.1.177.810.003218
ORF1ab/nsp12744E744DgaGgaT1616AE.80.007824
ORF1ab/nsp12744E744DgaGgaT1616AY.1000.000736
ORF1ab/nsp12744E744DgaGgaT1616AY.770.018038
ORF1ab/nsp12744E744DgaGgaT1616B.1.177.80.012039
ORF1ab/nsp12744E744DgaGgaT1616B.1.2430.001113
ORF1ab/nsp12744E744DgaGgaT1515B.1.1770.000198
ORF1ab/nsp12744E744DgaGgaT1515B.1.3490.010722
ORF1ab/nsp12744E744DgaGgaT1313AY.460.001353
ORF1ab/nsp12744E744DgaGgaT1313AY.5.40.003597
ORF1ab/nsp12744E744DgaGgaT1313B.1.5260.000306
ORF1ab/nsp12744E744DgaGgaT1212A.23.10.008451
ORF1ab/nsp12744E744DgaGgaT1212AY.46.60.000866
ORF1ab/nsp12744E744DgaGgaT1212B.1.5311
ORF1ab/nsp12744E744DgaGgaT1111AY.450.001339
ORF1ab/nsp12744E744DgaGgaT1010AY.1210.001353
ORF1ab/nsp12744E744DgaGgaT1010AY.210.018975
ORF1ab/nsp12744E744DgaGgaT1010B.1.1600.000312
ORF1ab/nsp12744E744DgaGgaT1010B.1.2340.001319
ORF1ab/nsp12744E744DgaGgaT1010B.1.6210.000885
ORF1ab/nsp12744E744DgaGgaT99AY.39.10.000357
ORF1ab/nsp12744E744DgaGgaT99B.1.2400.00194
ORF1ab/nsp12744E744DgaGgaT99B.1.4270.000454
ORF1ab/nsp12744E744DgaGgaT99P.1.140.00043
ORF1ab/nsp12744E744DgaGgaT88B.1.466.20.00313
ORF1ab/nsp12744E744DgaGgaT77AY.60.000288
ORF1ab/nsp12744E744DgaGgaT77AY.750.000392
ORF1ab/nsp12744E744DgaGgaT77AY.900.004791
ORF1ab/nsp12744E744DgaGgaT77AY.950.005327
ORF1ab/nsp12744E744DgaGgaT77B.1.1.3770.009669
ORF1ab/nsp12744E744DgaGgaT77B.1.2580.000466
ORF1ab/nsp12744E744DgaGgaT66AY.230.000418
ORF1ab/nsp12744E744DgaGgaT36AY.75.10.000541
ORF1ab/nsp12744E744DgaGgaT66AY.9.10.000502
ORF1ab/nsp12744E744DgaGgaT66B.1.1.1630.045802
ORF1ab/nsp12744E744DgaGgaT66B.1.1.5190.000238
ORF1ab/nsp12744E744DgaGgaT66B.1.5750.00182
ORF1ab/nsp12744E744DgaGgaT55AY.1010.002452
ORF1ab/nsp12744E744DgaGgaT55AY.1180.000313
ORF1ab/nsp12744E744DgaGgaT55AY.34.10.00255
ORF1ab/nsp12744E744DgaGgaT55AY.610.000524
ORF1ab/nsp12744E744DgaGgaT55AY.90.000338
ORF1ab/nsp12744E744DgaGgaT55B.1.1.2140.000277
ORF1ab/nsp12744E744DgaGgaT55B.1.360.00073
ORF1ab/nsp12744E744DgaGgaT55B.1.5250.000566
ORF1ab/nsp12744E744DgaGgaT55P.1.150.001162
ORF1ab/nsp12744E744DgaGgaT55Q.40.002274
ORF1ab/nsp12744E744DgaGgaT44AY.1130.00057
ORF1ab/nsp12744E744DgaGgaT44AY.4.50.00043
ORF1ab/nsp12744E744DgaGgaT44B0.000511
ORF1ab/nsp12744E744DgaGgaT44B.1.1.2220.000816
ORF1ab/nsp12744E744DgaGgaT44B.1.1.3480.003185
ORF1ab/nsp12744E744DgaGgaT44B.1.110.30.002874
ORF1ab/nsp12744E744DgaGgaT33AY.1140.000693
ORF1ab/nsp12744E744DgaGgaT33AY.160.001139
ORF1ab/nsp12744E744DgaGgaT33AY.270.000194
ORF1ab/nsp12744E744DgaGgaT33AY.3.10.000256
ORF1ab/nsp12744E744DgaGgaT33AY.370.000948
ORF1ab/nsp12744E744DgaGgaT33AY.540.000286
ORF1ab/nsp12744E744DgaGgaT33AY.550.002752
ORF1ab/nsp12744E744DgaGgaT33AY.660.003209
ORF1ab/nsp12744E744DgaGgaT33AY.740.000347
ORF1ab/nsp12744E744DgaGgaT33AY.930.000819
ORF1ab/nsp12744E744DgaGgaT33AY.940.001328
ORF1ab/nsp12744E744DgaGgaT33AY.980.000237
ORF1ab/nsp12744E744DgaGgaT33AY.990.003148
ORF1ab/nsp12744E744DgaGgaT33B.1.1.2840.000322
ORF1ab/nsp12744E744DgaGgaT33B.1.177.430.004431
ORF1ab/nsp12744E744DgaGgaT33B.1.36.290.001552
ORF1ab/nsp12744E744DgaGgaT33B.1.4970.000944
ORF1ab/nsp12744E744DgaGgaT33B.1.930.002801
ORF1ab/nsp12744E744DgaGgaT33C.36.30.001702
ORF1ab/nsp12744E744DgaGgaT33P.1.100.000808
ORF1ab/nsp12744E744DgaGgaT33P.1.170.000485
ORF1ab/nsp12744E744DgaGgaT33R.10.00027
ORF1ab/nsp12744E744DgaGgaT22AY.1070.000932
ORF1ab/nsp12744E744DgaGgaT22AY.1100.000225
ORF1ab/nsp12744E744DgaGgaT22AY.1110.000366
ORF1ab/nsp12744E744DgaGgaT22AY.340.000194
ORF1ab/nsp12744E744DgaGgaT22AY.4.2.10.000298
ORF1ab/nsp12744E744DgaGgaT22AY.400.001929
ORF1ab/nsp12744E744DgaGgaT22AY.46.10.002053
ORF1ab/nsp12744E744DgaGgaT22AY.570.001312
ORF1ab/nsp12744E744DgaGgaT22AY.680.000547
ORF1ab/nsp12744E744DgaGgaT22AY.70.000392
ORF1ab/nsp12744E744DgaGgaT22AY.7.10.000225
ORF1ab/nsp12744E744DgaGgaT22AY.7.20.001119
ORF1ab/nsp12744E744DgaGgaT22AY.700.000417
ORF1ab/nsp12744E744DgaGgaT22AY.840.000875
ORF1ab/nsp12744E744DgaGgaT22AY.920.000575
ORF1ab/nsp12744E744DgaGgaT22B.1.1.1210.004854
ORF1ab/nsp12744E744DgaGgaT22B.1.1.250.001137
ORF1ab/nsp12744E744DgaGgaT22B.1.1.2740.010101
ORF1ab/nsp12744E744DgaGgaT22B.1.1.2790.002242
ORF1ab/nsp12744E744DgaGgaT22B.1.1.4200.002012
ORF1ab/nsp12744E744DgaGgaT22B.1.1.4320.002532
ORF1ab/nsp12744E744DgaGgaT22B.1.1.4340.000697
ORF1ab/nsp12744E744DgaGgaT22B.1.1.540.006042
ORF1ab/nsp12744E744DgaGgaT12B.1.1.630.000386
ORF1ab/nsp12744E744DgaGgaT22B.1.1180.013423
ORF1ab/nsp12744E744DgaGgaT22B.1.177.770.001452
ORF1ab/nsp12744E744DgaGgaT22B.1.243.20.028986
ORF1ab/nsp12744E744DgaGgaT22B.1.2790.001027
ORF1ab/nsp12744E744DgaGgaT22B.1.3690.00057
ORF1ab/nsp12744E744DgaGgaT22B.1.438.10.000215
ORF1ab/nsp12744E744DgaGgaT22B.1.5990.007299
ORF1ab/nsp12744E744DgaGgaT22B.1.617.10.000258
ORF1ab/nsp12744E744DgaGgaT22B.1.6250.004706
ORF1ab/nsp12744E744DgaGgaT22B.560.057143
ORF1ab/nsp12744E744DgaGgaT22C.20.032258
ORF1ab/nsp12744E744DgaGgaT12Q.10.000126
ORF1ab/nsp12744E744DgaGgaT22Q.80.00033
ORF1ab/nsp12744E744DgaGgaT11A0.000387
ORF1ab/nsp12744E744DgaGgaT11A.2.40.003367
ORF1ab/nsp12744E744DgaGgaT11A.270.001656
ORF1ab/nsp12744E744DgaGgaT11A.280.002646
ORF1ab/nsp12744E744DgaGgaT11AY.10.000396
ORF1ab/nsp12744E744DgaGgaT11AY.1060.000335
ORF1ab/nsp12744E744DgaGgaT11AY.1090.00074
ORF1ab/nsp12744E744DgaGgaT11AY.1160.000287
ORF1ab/nsp12744E744DgaGgaT11AY.120.10.000321
ORF1ab/nsp12744E744DgaGgaT11AY.150.002222
ORF1ab/nsp12744E744DgaGgaT11AY.16.10.00047
ORF1ab/nsp12744E744DgaGgaT11AY.23.10.000417
ORF1ab/nsp12744E744DgaGgaT11AY.240.000431
ORF1ab/nsp12744E744DgaGgaT11AY.360.000148
ORF1ab/nsp12744E744DgaGgaT11AY.410.000294
ORF1ab/nsp12744E744DgaGgaT11AY.480.000465
ORF1ab/nsp12744E744DgaGgaT11AY.630.000387
ORF1ab/nsp12744E744DgaGgaT11AY.670.000464
ORF1ab/nsp12744E744DgaGgaT11AY.790.001211
ORF1ab/nsp12744E744DgaGgaT11AY.850.000427
ORF1ab/nsp12744E744DgaGgaT11AY.890.004902
ORF1ab/nsp12744E744DgaGgaT11B.1.1.100.001115
ORF1ab/nsp12744E744DgaGgaT11B.1.1.1920.002309
ORF1ab/nsp12744E744DgaGgaT11B.1.1.2070.001182
ORF1ab/nsp12744E744DgaGgaT11B.1.1.2620.015152
ORF1ab/nsp12744E744DgaGgaT11B.1.1.280.000311
ORF1ab/nsp12744E744DgaGgaT11B.1.1.2940.001266
ORF1ab/nsp12744E744DgaGgaT11B.1.1.3050.003861
ORF1ab/nsp12744E744DgaGgaT11B.1.1.3180.000302
ORF1ab/nsp12744E744DgaGgaT11B.1.1.3540.004386
ORF1ab/nsp12744E744DgaGgaT11B.1.1.3720.000689
ORF1ab/nsp12744E744DgaGgaT11B.1.1.390.00051
ORF1ab/nsp12744E744DgaGgaT11B.1.1.4090.002833
ORF1ab/nsp12744E744DgaGgaT11B.1.1.440.00241
ORF1ab/nsp12744E744DgaGgaT11B.1.1.500.000679
ORF1ab/nsp12744E744DgaGgaT11B.1.1.700.000341
ORF1ab/nsp12744E744DgaGgaT11B.1.1640.014925
ORF1ab/nsp12744E744DgaGgaT11B.1.1670.007812
ORF1ab/nsp12744E744DgaGgaT11B.1.177.100.000878
ORF1ab/nsp12744E744DgaGgaT11B.1.177.120.000152
ORF1ab/nsp12744E744DgaGgaT11B.1.177.40.000211
ORF1ab/nsp12744E744DgaGgaT11B.1.177.440.000519
ORF1ab/nsp12744E744DgaGgaT11B.1.177.510.004566
ORF1ab/nsp12744E744DgaGgaT11B.1.177.570.000281
ORF1ab/nsp12744E744DgaGgaT11B.1.177.590.016129
ORF1ab/nsp12744E744DgaGgaT11B.1.177.820.000477
ORF1ab/nsp12744E744DgaGgaT11B.1.2220.001692
ORF1ab/nsp12744E744DgaGgaT11B.1.3110.000275
ORF1ab/nsp12744E744DgaGgaT11B.1.351.10.038462
ORF1ab/nsp12744E744DgaGgaT11B.1.351.20.000303
ORF1ab/nsp12744E744DgaGgaT11B.1.36.240.006173
ORF1ab/nsp12744E744DgaGgaT11B.1.3960.000706
ORF1ab/nsp12744E744DgaGgaT11B.1.4040.001302
ORF1ab/nsp12744E744DgaGgaT11B.1.4280.00102
ORF1ab/nsp12744E744DgaGgaT11B.1.4320.011236
ORF1ab/nsp12744E744DgaGgaT11B.1.4560.003268
ORF1ab/nsp12744E744DgaGgaT11B.1.5090.000866
ORF1ab/nsp12744E744DgaGgaT11B.1.5520.015152
ORF1ab/nsp12744E744DgaGgaT11B.1.5580.004566
ORF1ab/nsp12744E744DgaGgaT11B.1.5820.000491
ORF1ab/nsp12744E744DgaGgaT11B.1.5950.000261
ORF1ab/nsp12744E744DgaGgaT11B.110.005128
ORF1ab/nsp12744E744DgaGgaT11B.200.023256
ORF1ab/nsp12744E744DgaGgaT11B.6.60.000889
ORF1ab/nsp12744E744DgaGgaT11C.10.002392
ORF1ab/nsp12744E744DgaGgaT11C.1.20.004255
ORF1ab/nsp12744E744DgaGgaT11C.350.000774
ORF1ab/nsp12744E744DgaGgaT11C.370.000116
ORF1ab/nsp12744E744DgaGgaT11N.50.001767
ORF1ab/nsp12744E744DgaGgaT11P.1.10.000318
ORF1ab/nsp12744E744DgaGgaT11P.1.120.000484
ORF1ab/nsp12744E744DgaGgaT11Q.20.000613
ORF1ab/nsp12744E744DgaGgaT11Q.30.000145