CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 738

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12738D738DD5130DsyngaCgaT97469746115652-15654
ORF1ab/nsp12738D738YD5130YnonsynGacTac455945580.99978115652-15654
ORF1ab/nsp12738D738YD5130YnonsynGaCTaT455910.00021934615652-15654
ORF1ab/nsp12738D738ND5130NnonsynGacAac80730.912515652-15654
ORF1ab/nsp12738D738ND5130NnonsynGaCAaT8070.087515652-15654
ORF1ab/nsp12738D738GD5130GnonsyngAcgGc6969115652-15654
ORF1ab/nsp12738D738ED5130EnonsyngaCgaA33310.93939415652-15654
ORF1ab/nsp12738D738ED5130EnonsyngaCgaG3320.060606115652-15654
ORF1ab/nsp12738D738delD5130deldelGAC---2525115652-15654
ORF1ab/nsp12738D738HD5130HnonsynGacCac13120.92307715652-15654
ORF1ab/nsp12738D738HD5130HnonsynGaCCaT1310.076923115652-15654
ORF1ab/nsp12738D738AD5130AnonsyngAcgCc1111115652-15654
ORF1ab/nsp12738D738VD5130VnonsyngAcgTc840.515652-15654
ORF1ab/nsp12738D738VD5130VnonsyngACgTA820.2515652-15654
ORF1ab/nsp12738D738VD5130VnonsyngACgTG820.2515652-15654
ORF1ab/nsp12738D738KD5130KnonsynGaCAaA530.615652-15654
ORF1ab/nsp12738D738KD5130KnonsynGaCAaG520.415652-15654
ORF1ab/nsp12738D738del1D5130del1delGac-ac430.7515652-15654
ORF1ab/nsp12738D738del1D5130del1delgAcg-c410.2515652-15654
ORF1ab/nsp12738D738del2D5130del2delgACg--33115652-15654
ORF1ab/nsp12738D738XD5130XnonsynGaCTaA11115652-15654
ORF1ab/nsp12738D738PD5130PnonsynGACCCT11115652-15654

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12738D738DgaCgaT97469746All0.001864
ORF1ab/nsp12738D738YGacTac45584559All0.000872
ORF1ab/nsp12738D738YGaCTaT14559All0
ORF1ab/nsp12738D738DgaCgaT35773577AY.390.088393
ORF1ab/nsp12738D738DgaCgaT13541354B.1.1.70.001212
ORF1ab/nsp12738D738YGacTac10991099B.1.1.2770.833839
ORF1ab/nsp12738D738YGacTac917917B.1.1.70.000821
ORF1ab/nsp12738D738DgaCgaT841841AY.40.001309
ORF1ab/nsp12738D738DgaCgaT393393B.1.5640.167376
ORF1ab/nsp12738D738YGacTac258258AY.1200.009592
ORF1ab/nsp12738D738YGacTac242242AY.40.000377
ORF1ab/nsp12738D738DgaCgaT227227B.1.617.20.000855
ORF1ab/nsp12738D738YGacTac225225B.1.617.20.000847
ORF1ab/nsp12738D738DgaCgaT174174AY.1030.00108
ORF1ab/nsp12738D738YGacTac162162K.31
ORF1ab/nsp12738D738DgaCgaT158158AY.330.010551
ORF1ab/nsp12738D738DgaCgaT157157B.1.1770.002067
ORF1ab/nsp12738D738DgaCgaT151151B.10.001383
ORF1ab/nsp12738D738DgaCgaT151151B.1.20.00133
ORF1ab/nsp12738D738DgaCgaT147147AY.290.002319
ORF1ab/nsp12738D738DgaCgaT142142AY.250.000854
ORF1ab/nsp12738D738YGacTac136136B.10.001246
ORF1ab/nsp12738D738DgaCgaT129129B.1.1.2430.526531
ORF1ab/nsp12738D738DgaCgaT119119B.1.6060.716867
ORF1ab/nsp12738D738DgaCgaT113113B.1.1.330.047559
ORF1ab/nsp12738D738DgaCgaT112112B.1.1460.474576
ORF1ab/nsp12738D738DgaCgaT111111R.10.009991
ORF1ab/nsp12738D738YGacTac9898AY.430.000434
ORF1ab/nsp12738D738DgaCgaT9797B.1.177.810.018364
ORF1ab/nsp12738D738YGacTac9090AY.1020.002386
ORF1ab/nsp12738D738YGacTac8888P.1.10.027954
ORF1ab/nsp12738D738YGacTac8686AY.1190.003037
ORF1ab/nsp12738D738NGacAac7380All0.000014
ORF1ab/nsp12738D738NGaCAaT780All0.000001
ORF1ab/nsp12738D738YGacTac7878AY.600.073171
ORF1ab/nsp12738D738DgaCgaT7575AY.430.000332
ORF1ab/nsp12738D738YGacTac7474AY.440.00045
ORF1ab/nsp12738D738DgaCgaT7272B.1.10.001306
ORF1ab/nsp12738D738YGacTac7070B.1.1770.000922
ORF1ab/nsp12738D738GgAcgGc6969All0.000013
ORF1ab/nsp12738D738DgaCgaT6868AY.460.007077
ORF1ab/nsp12738D738DgaCgaT6868B.1.5960.005925
ORF1ab/nsp12738D738YGacTac6667AY.30.000656
ORF1ab/nsp12738D738YGaCTaT167AY.30.00001
ORF1ab/nsp12738D738DgaCgaT6666B.1.6370.004823
ORF1ab/nsp12738D738YGacTac6262AY.250.000373
ORF1ab/nsp12738D738DgaCgaT6262AY.30.000617
ORF1ab/nsp12738D738YGacTac6262AY.340.006012
ORF1ab/nsp12738D738YGacTac5656AY.1030.000348
ORF1ab/nsp12738D738DgaCgaT5555B.1.5260.001293
ORF1ab/nsp12738D738DgaCgaT4545AY.440.000274
ORF1ab/nsp12738D738DgaCgaT4545B.1.1600.001403
ORF1ab/nsp12738D738YGacTac4141B.1.20.000361
ORF1ab/nsp12738D738GgAcgGc3939B.1.1.70.000035
ORF1ab/nsp12738D738DgaCgaT3838AY.750.002129
ORF1ab/nsp12738D738DgaCgaT3838B.1.4290.000894
ORF1ab/nsp12738D738YGacTac3434AY.390.00084
ORF1ab/nsp12738D738EgaCgaA3133All0.000006
ORF1ab/nsp12738D738EgaCgaG233All0
ORF1ab/nsp12738D738DgaCgaT3333B.1.2430.002296
ORF1ab/nsp12738D738DgaCgaT3030B.1.258.170.003119
ORF1ab/nsp12738D738YGacTac2626AY.330.001736
ORF1ab/nsp12738D738DgaCgaT2626P.10.00041
ORF1ab/nsp12738D738delGAC---2525All0.000005
ORF1ab/nsp12738D738DgaCgaT2525AY.1020.000663
ORF1ab/nsp12738D738DgaCgaT2424AY.39.10.000951
ORF1ab/nsp12738D738YGacTac2424B.1.6230.012876
ORF1ab/nsp12738D738YGacTac2121AY.20.007479
ORF1ab/nsp12738D738YGacTac2121AY.290.000331
ORF1ab/nsp12738D738DgaCgaT2121B.1.1.3980.067742
ORF1ab/nsp12738D738DgaCgaT2121B.1.2340.002771
ORF1ab/nsp12738D738YGacTac2020B.1.10.000363
ORF1ab/nsp12738D738DgaCgaT2020B.1.1.700.006821
ORF1ab/nsp12738D738DgaCgaT2020B.1.3510.000595
ORF1ab/nsp12738D738DgaCgaT1919B.1.1.5190.000755
ORF1ab/nsp12738D738DgaCgaT1818AY.1190.000636
ORF1ab/nsp12738D738DgaCgaT1818AY.470.00056
ORF1ab/nsp12738D738DgaCgaT1717AY.200.000661
ORF1ab/nsp12738D738YGacTac1717AY.4.20.000369
ORF1ab/nsp12738D738DgaCgaT1717AY.50.000351
ORF1ab/nsp12738D738YGacTac1717B.1.4290.0004
ORF1ab/nsp12738D738YGacTac1717B.1.5960.001481
ORF1ab/nsp12738D738YGacTac1717P.10.000268
ORF1ab/nsp12738D738YGacTac1616B.1.177.500.075117
ORF1ab/nsp12738D738DgaCgaT1616B.1.177.830.023704
ORF1ab/nsp12738D738YGacTac1515AY.260.000425
ORF1ab/nsp12738D738DgaCgaT1515B.1.5250.001697
ORF1ab/nsp12738D738YGacTac1515P.1.140.000717
ORF1ab/nsp12738D738YGacTac1414AY.50.000289
ORF1ab/nsp12738D738YGacTac1414B.1.1.5190.000556
ORF1ab/nsp12738D738YGacTac1414B.1.2790.007191
ORF1ab/nsp12738D738DgaCgaT1414B.1.5950.003653
ORF1ab/nsp12738D738DgaCgaT1414N.50.024735
ORF1ab/nsp12738D738HGacCac1213All0.000002
ORF1ab/nsp12738D738HGaCCaT113All0
ORF1ab/nsp12738D738DgaCgaT1313AY.160.004935
ORF1ab/nsp12738D738DgaCgaT1313AY.46.50.002579
ORF1ab/nsp12738D738DgaCgaT1313B.1.6210.001151
ORF1ab/nsp12738D738DgaCgaT1212AY.980.000948
ORF1ab/nsp12738D738DgaCgaT1212B.1.1.2800.037037
ORF1ab/nsp12738D738DgaCgaT1212B.1.6180.048387
ORF1ab/nsp12738D738AgAcgCc1111All0.000002
ORF1ab/nsp12738D738DgaCgaT1111AY.1090.008136
ORF1ab/nsp12738D738NGacAac1111AY.250.000066
ORF1ab/nsp12738D738YGacTac1111AY.470.000342
ORF1ab/nsp12738D738YGacTac1111B.1.5750.003337
ORF1ab/nsp12738D738DgaCgaT1010AY.230.000697
ORF1ab/nsp12738D738DgaCgaT1010AY.4.20.000217
ORF1ab/nsp12738D738delGAC---1010B.1.1.70.000009
ORF1ab/nsp12738D738DgaCgaT1010B.1.2580.000665
ORF1ab/nsp12738D738DgaCgaT99AY.10.003562
ORF1ab/nsp12738D738DgaCgaT99B0.00115
ORF1ab/nsp12738D738NGacAac99B.1.1.5190.000357
ORF1ab/nsp12738D738DgaCgaT99B.1.36.290.004656
ORF1ab/nsp12738D738VgAcgTc48All0.000001
ORF1ab/nsp12738D738VgACgTG28All0
ORF1ab/nsp12738D738VgACgTA28All0
ORF1ab/nsp12738D738YGacTac88AY.230.000558
ORF1ab/nsp12738D738DgaCgaT88B.1.1.1530.008762
ORF1ab/nsp12738D738EgaCgaA88B.1.1.70.000007
ORF1ab/nsp12738D738DgaCgaT88B.1.177.500.037559
ORF1ab/nsp12738D738YGacTac88C.370.000929
ORF1ab/nsp12738D738DgaCgaT88P.1.140.000382
ORF1ab/nsp12738D738DgaCgaT77AH.11
ORF1ab/nsp12738D738DgaCgaT77AY.60.000288
ORF1ab/nsp12738D738YGacTac77AY.850.00299
ORF1ab/nsp12738D738DgaCgaT77AY.860.005809
ORF1ab/nsp12738D738YGacTac77AY.90.000473
ORF1ab/nsp12738D738YGacTac77AY.9.20.000257
ORF1ab/nsp12738D738DgaCgaT77AY.920.002011
ORF1ab/nsp12738D738YGacTac77B.1.2210.000497
ORF1ab/nsp12738D738DgaCgaT77B.1.3690.001997
ORF1ab/nsp12738D738DgaCgaT77B.1.4270.000353
ORF1ab/nsp12738D738DgaCgaT77C.370.000812
ORF1ab/nsp12738D738VgAcgTc260.111111
ORF1ab/nsp12738D738VgACgTA260.111111
ORF1ab/nsp12738D738VgACgTG260.111111
ORF1ab/nsp12738D738YGacTac66AY.200.000233
ORF1ab/nsp12738D738YGacTac66AY.300.002374
ORF1ab/nsp12738D738DgaCgaT66AY.420.000241
ORF1ab/nsp12738D738YGacTac66AY.460.000624
ORF1ab/nsp12738D738YGacTac66AY.60.000247
ORF1ab/nsp12738D738DgaCgaT66AY.9.20.00022
ORF1ab/nsp12738D738YGacTac66AY.99.20.000553
ORF1ab/nsp12738D738DgaCgaT66AY.99.20.000553
ORF1ab/nsp12738D738YGacTac66B.1.1.2140.000333
ORF1ab/nsp12738D738NGacAac66B.1.1.70.000005
ORF1ab/nsp12738D738YGacTac66B.1.3510.000178
ORF1ab/nsp12738D738DgaCgaT66D.20.00045
ORF1ab/nsp12738D738YGacTac66K.10.142857
ORF1ab/nsp12738D738KGaCAaA35All0.000001
ORF1ab/nsp12738D738KGaCAaG25All0
ORF1ab/nsp12738D738DgaCgaT55AY.1180.000313
ORF1ab/nsp12738D738YGacTac55AY.120.10.001605
ORF1ab/nsp12738D738DgaCgaT55AY.140.00044
ORF1ab/nsp12738D738DgaCgaT55AY.300.001979
ORF1ab/nsp12738D738DgaCgaT55AY.340.000485
ORF1ab/nsp12738D738NGacAac55AY.40.000008
ORF1ab/nsp12738D738DgaCgaT55AY.4.2.10.000745
ORF1ab/nsp12738D738NGaCAaT55AY.560.008026
ORF1ab/nsp12738D738DgaCgaT55AY.610.000524
ORF1ab/nsp12738D738YGacTac55AY.920.001436
ORF1ab/nsp12738D738NGacAac55B.1.10.000091
ORF1ab/nsp12738D738DgaCgaT55B.1.1.3180.001509
ORF1ab/nsp12738D738DgaCgaT55B.1.1.630.001929
ORF1ab/nsp12738D738DgaCgaT55B.1.177.210.000382
ORF1ab/nsp12738D738YGacTac55B.1.5260.000118
ORF1ab/nsp12738D738YGacTac55B.1.617.10.000645
ORF1ab/nsp12738D738DgaCgaT55Z.10.014451
ORF1ab/nsp12738D738KGaCAaA240.111111
ORF1ab/nsp12738D738KGaCAaG240.111111
ORF1ab/nsp12738D738del1Gac-ac34All0.000001
ORF1ab/nsp12738D738del1gAcg-c14All0
ORF1ab/nsp12738D738YGacTac44AY.1000.000184
ORF1ab/nsp12738D738DgaCgaT44AY.1170.000338
ORF1ab/nsp12738D738YGacTac44AY.1170.000338
ORF1ab/nsp12738D738DgaCgaT44AY.1200.000149
ORF1ab/nsp12738D738DgaCgaT44AY.130.000644
ORF1ab/nsp12738D738YGacTac44AY.39.10.000158
ORF1ab/nsp12738D738GgAcgGc44AY.420.000161
ORF1ab/nsp12738D738NGacAac44AY.440.000024
ORF1ab/nsp12738D738YGacTac44AY.5.30.00135
ORF1ab/nsp12738D738DgaCgaT44AY.590.002119
ORF1ab/nsp12738D738YGacTac44AY.740.000463
ORF1ab/nsp12738D738YGacTac44AY.840.00175
ORF1ab/nsp12738D738YGacTac44AY.98.10.000194
ORF1ab/nsp12738D738YGacTac44B.1.1.10.001307
ORF1ab/nsp12738D738YGacTac44B.1.1.120.029851
ORF1ab/nsp12738D738DgaCgaT44B.1.1.2140.000222
ORF1ab/nsp12738D738DgaCgaT44B.1.1.280.001245
ORF1ab/nsp12738D738YGacTac44B.1.1.3060.001754
ORF1ab/nsp12738D738YGacTac44B.1.1.4320.005063
ORF1ab/nsp12738D738YGacTac44B.1.1600.000125
ORF1ab/nsp12738D738DgaCgaT44B.1.177.160.002658
ORF1ab/nsp12738D738DgaCgaT44B.1.177.440.002076
ORF1ab/nsp12738D738DgaCgaT44B.1.177.870.002911
ORF1ab/nsp12738D738YGacTac44B.1.2430.000278
ORF1ab/nsp12738D738YGacTac44B.1.258.70.007648
ORF1ab/nsp12738D738DgaCgaT44B.1.2650.005083
ORF1ab/nsp12738D738DgaCgaT44B.1.360.000584
ORF1ab/nsp12738D738DgaCgaT44B.1.617.10.000516
ORF1ab/nsp12738D738NGacAac34B.1.617.20.000011
ORF1ab/nsp12738D738NGaCAaT14B.1.617.20.000004
ORF1ab/nsp12738D738DgaCgaT44B.1.6280.001409
ORF1ab/nsp12738D738YGacTac44P.1.170.000647
ORF1ab/nsp12738D738DgaCgaT44P.20.000747
ORF1ab/nsp12738D738DgaCgaT33A.2.50.001497
ORF1ab/nsp12738D738del2gACg--33All0.000001
ORF1ab/nsp12738D738NGacAac33AY.1030.000019
ORF1ab/nsp12738D738YGacTac33AY.1080.003308
ORF1ab/nsp12738D738DgaCgaT33AY.1130.000427
ORF1ab/nsp12738D738GgAcgGc33AY.1190.000106
ORF1ab/nsp12738D738EgaCgaA33AY.250.000018
ORF1ab/nsp12738D738GgAcgGc33AY.260.000085
ORF1ab/nsp12738D738DgaCgaT33AY.260.000085
ORF1ab/nsp12738D738AgAcgCc33AY.30.00003
ORF1ab/nsp12738D738EgaCgaA33AY.30.00003
ORF1ab/nsp12738D738DgaCgaT33AY.360.000445
ORF1ab/nsp12738D738DgaCgaT33AY.380.001498
ORF1ab/nsp12738D738DgaCgaT33AY.39.20.004622
ORF1ab/nsp12738D738AgAcgCc33AY.40.000005
ORF1ab/nsp12738D738DgaCgaT33AY.4.40.001227
ORF1ab/nsp12738D738YGacTac33AY.410.000882
ORF1ab/nsp12738D738YGacTac33AY.450.000365
ORF1ab/nsp12738D738YGacTac33AY.46.20.001906
ORF1ab/nsp12738D738DgaCgaT33AY.46.60.000217
ORF1ab/nsp12738D738DgaCgaT33AY.480.001395
ORF1ab/nsp12738D738DgaCgaT33AY.540.000286
ORF1ab/nsp12738D738YGacTac33AY.540.000286
ORF1ab/nsp12738D738DgaCgaT33AY.580.002722
ORF1ab/nsp12738D738YGacTac33AY.650.001599
ORF1ab/nsp12738D738DgaCgaT33AY.70.000588
ORF1ab/nsp12738D738NGacAac33AY.750.000168
ORF1ab/nsp12738D738YGacTac33AY.750.000168
ORF1ab/nsp12738D738YGacTac33AY.900.002053
ORF1ab/nsp12738D738DgaCgaT33AY.98.10.000145
ORF1ab/nsp12738D738YGacTac33B.1.1.1350.014085
ORF1ab/nsp12738D738YGacTac33B.1.1.1680.078947
ORF1ab/nsp12738D738DgaCgaT33B.1.1.2220.000612
ORF1ab/nsp12738D738DgaCgaT33B.1.1.3560.025641
ORF1ab/nsp12738D738NGacAac33B.1.1770.00004
ORF1ab/nsp12738D738YGacTac33B.1.177.350.002073
ORF1ab/nsp12738D738YGacTac33B.1.177.570.000843
ORF1ab/nsp12738D738YGacTac33B.1.2320.001612
ORF1ab/nsp12738D738DgaCgaT33B.1.2390.003663
ORF1ab/nsp12738D738DgaCgaT33B.1.2600.010033
ORF1ab/nsp12738D738YGacTac33B.1.3360.007317
ORF1ab/nsp12738D738YGacTac33B.1.36.290.001552
ORF1ab/nsp12738D738DgaCgaT33B.1.416.10.004687
ORF1ab/nsp12738D738DgaCgaT33B.1.5180.035294
ORF1ab/nsp12738D738YGacTac33B.1.5250.000339
ORF1ab/nsp12738D738DgaCgaT33B.1.5510.003871
ORF1ab/nsp12738D738DgaCgaT33B.1.5820.001472
ORF1ab/nsp12738D738GgAcgGc33B.1.617.10.000387
ORF1ab/nsp12738D738DgaCgaT33B.1.780.025641
ORF1ab/nsp12738D738DgaCgaT33C.160.003181
ORF1ab/nsp12738D738YGacTac33D.20.000225
ORF1ab/nsp12738D738DgaCgaT33P.1.120.001452
ORF1ab/nsp12738D738DgaCgaT33Q.80.000495
ORF1ab/nsp12738D738DgaCgaT220.111111
ORF1ab/nsp12738D738NGacAac220.111111
ORF1ab/nsp12738D738YGacTac22A0.000774
ORF1ab/nsp12738D738DgaCgaT22A.20.001324
ORF1ab/nsp12738D738YGacTac22AY.1130.000285
ORF1ab/nsp12738D738DgaCgaT22AY.1160.000574
ORF1ab/nsp12738D738YGacTac22AY.1180.000125
ORF1ab/nsp12738D738EgaCgaA22AY.1180.000125
ORF1ab/nsp12738D738DgaCgaT22AY.120.000632
ORF1ab/nsp12738D738YGacTac22AY.1210.000271
ORF1ab/nsp12738D738DgaCgaT22AY.1210.000271
ORF1ab/nsp12738D738YGacTac22AY.160.000759
ORF1ab/nsp12738D738DgaCgaT22AY.16.10.00094
ORF1ab/nsp12738D738DgaCgaT22AY.270.000129
ORF1ab/nsp12738D738DgaCgaT22AY.29.10.000441
ORF1ab/nsp12738D738NGacAac22AY.330.000134
ORF1ab/nsp12738D738GgAcgGc22AY.350.000466
ORF1ab/nsp12738D738DgaCgaT22AY.4.10.001475
ORF1ab/nsp12738D738DgaCgaT22AY.4.50.000215
ORF1ab/nsp12738D738NGacAac22AY.420.00008
ORF1ab/nsp12738D738HGacCac22AY.430.000009
ORF1ab/nsp12738D738GgAcgGc22AY.50.000041
ORF1ab/nsp12738D738DgaCgaT22AY.5.40.000553
ORF1ab/nsp12738D738HGacCac22AY.690.000373
ORF1ab/nsp12738D738DgaCgaT22AY.690.000373
ORF1ab/nsp12738D738YGacTac22AY.75.10.000361
ORF1ab/nsp12738D738DgaCgaT22AY.75.10.000361
ORF1ab/nsp12738D738NGacAac22B.10.000018
ORF1ab/nsp12738D738DgaCgaT22B.1.1.100.00223
ORF1ab/nsp12738D738DgaCgaT22B.1.1.2070.002364
ORF1ab/nsp12738D738DgaCgaT22B.1.1.2160.001781
ORF1ab/nsp12738D738DgaCgaT22B.1.1.2280.006098
ORF1ab/nsp12738D738delGAC---22B.1.1.2360.013793
ORF1ab/nsp12738D738YGacTac22B.1.1.280.000622
ORF1ab/nsp12738D738DgaCgaT22B.1.1.2860.005797
ORF1ab/nsp12738D738GgAcgGc22B.1.1.2990.02439
ORF1ab/nsp12738D738DgaCgaT22B.1.1.3060.000877
ORF1ab/nsp12738D738DgaCgaT22B.1.1.3170.000823
ORF1ab/nsp12738D738YGacTac22B.1.1.3540.008772
ORF1ab/nsp12738D738YGacTac22B.1.1.3850.008929
ORF1ab/nsp12738D738DgaCgaT22B.1.1.4420.037037
ORF1ab/nsp12738D738DgaCgaT22B.1.110.30.001437
ORF1ab/nsp12738D738DgaCgaT22B.1.1470.001512
ORF1ab/nsp12738D738delGAC---22B.1.1770.000026
ORF1ab/nsp12738D738GgAcgGc22B.1.1770.000026
ORF1ab/nsp12738D738DgaCgaT22B.1.177.100.001756
ORF1ab/nsp12738D738NGacAac22B.1.177.170.001642
ORF1ab/nsp12738D738YGacTac22B.1.177.600.000437
ORF1ab/nsp12738D738DgaCgaT22B.1.1890.008584
ORF1ab/nsp12738D738EgaCgaA22B.1.20.000018
ORF1ab/nsp12738D738YGacTac22B.1.2400.000431
ORF1ab/nsp12738D738DgaCgaT22B.1.258.100.022727
ORF1ab/nsp12738D738DgaCgaT22B.1.3110.000549
ORF1ab/nsp12738D738DgaCgaT22B.1.36.180.00084
ORF1ab/nsp12738D738DgaCgaT22B.1.36.190.018519
ORF1ab/nsp12738D738DgaCgaT22B.1.3620.003082
ORF1ab/nsp12738D738DgaCgaT22B.1.466.20.000782
ORF1ab/nsp12738D738NGacAac22B.1.4700.002809
ORF1ab/nsp12738D738HGacCac22B.1.5260.000047
ORF1ab/nsp12738D738DgaCgaT22B.1.5770.001375
ORF1ab/nsp12738D738YGacTac22B.1.5950.000522
ORF1ab/nsp12738D738DgaCgaT22B.1.6090.000959
ORF1ab/nsp12738D738DgaCgaT22B.1.6360.013423
ORF1ab/nsp12738D738DgaCgaT22B.400.000729
ORF1ab/nsp12738D738EgaCgaA22P.10.000032
ORF1ab/nsp12738D738EgaCgaA110.055556
ORF1ab/nsp12738D738DgaCgaT11A.2.20.001689
ORF1ab/nsp12738D738YGacTac11A.230.010526
ORF1ab/nsp12738D738DgaCgaT11A.23.10.000704
ORF1ab/nsp12738D738DgaCgaT11AD.20.000219
ORF1ab/nsp12738D738DgaCgaT11AE.80.000489
ORF1ab/nsp12738D738XGaCTaA11All0
ORF1ab/nsp12738D738PGACCCT11All0
ORF1ab/nsp12738D738YGacTac11AP.10.001502
ORF1ab/nsp12738D738YGacTac11AY.10.000396
ORF1ab/nsp12738D738YGacTac11AY.1070.000466
ORF1ab/nsp12738D738DgaCgaT11AY.1080.001103
ORF1ab/nsp12738D738YGacTac11AY.1110.000183
ORF1ab/nsp12738D738NGacAac11AY.1140.000231
ORF1ab/nsp12738D738YGacTac11AY.1160.000287
ORF1ab/nsp12738D738DgaCgaT11AY.116.10.000311
ORF1ab/nsp12738D738YGacTac11AY.120.000316
ORF1ab/nsp12738D738YGacTac11AY.130.000161
ORF1ab/nsp12738D738YGacTac11AY.16.10.00047
ORF1ab/nsp12738D738DgaCgaT11AY.190.00114
ORF1ab/nsp12738D738DgaCgaT11AY.23.10.000417
ORF1ab/nsp12738D738YGacTac11AY.280.00189
ORF1ab/nsp12738D738HGacCac11AY.290.000016
ORF1ab/nsp12738D738YGacTac11AY.29.10.000221
ORF1ab/nsp12738D738NGaCAaT11AY.30.00001
ORF1ab/nsp12738D738KGaCAaA11AY.30.00001
ORF1ab/nsp12738D738XGaCTaA11AY.30.00001
ORF1ab/nsp12738D738DgaCgaT11AY.3.10.000085
ORF1ab/nsp12738D738YGacTac11AY.3.10.000085
ORF1ab/nsp12738D738GgAcgGc11AY.330.000067
ORF1ab/nsp12738D738GgAcgGc11AY.34.10.00051
ORF1ab/nsp12738D738YGacTac11AY.350.000233
ORF1ab/nsp12738D738HGacCac11AY.390.000025
ORF1ab/nsp12738D738YGacTac11AY.39.1.10.000725
ORF1ab/nsp12738D738EgaCgaA11AY.40.000002
ORF1ab/nsp12738D738delGAC---11AY.40.000002
ORF1ab/nsp12738D738NGacAac11AY.4.20.000022
ORF1ab/nsp12738D738YGacTac11AY.4.2.10.000149
ORF1ab/nsp12738D738YGacTac11AY.4.40.000409
ORF1ab/nsp12738D738NGacAac11AY.4.50.000107
ORF1ab/nsp12738D738delGAC---11AY.4.50.000107
ORF1ab/nsp12738D738DgaCgaT11AY.400.000964
ORF1ab/nsp12738D738YGacTac11AY.420.00004
ORF1ab/nsp12738D738EgaCgaA11AY.430.000004
ORF1ab/nsp12738D738GgAcgGc11AY.430.000004
ORF1ab/nsp12738D738GgAcgGc11AY.440.000006
ORF1ab/nsp12738D738del2gACg--11AY.440.000006
ORF1ab/nsp12738D738DgaCgaT11AY.450.000122
ORF1ab/nsp12738D738DgaCgaT11AY.46.40.000165
ORF1ab/nsp12738D738YGacTac11AY.46.60.000072
ORF1ab/nsp12738D738NGacAac11AY.46.60.000072
ORF1ab/nsp12738D738YGacTac11AY.5.40.000277
ORF1ab/nsp12738D738DgaCgaT11AY.510.000909
ORF1ab/nsp12738D738YGacTac11AY.520.000814
ORF1ab/nsp12738D738YGacTac11AY.570.000656
ORF1ab/nsp12738D738YGacTac11AY.590.00053
ORF1ab/nsp12738D738YGacTac11AY.610.000105
ORF1ab/nsp12738D738DgaCgaT11AY.620.000436
ORF1ab/nsp12738D738DgaCgaT11AY.650.000533
ORF1ab/nsp12738D738HGaCCaT11AY.670.000464
ORF1ab/nsp12738D738PGACCCT11AY.670.000464
ORF1ab/nsp12738D738YGacTac11AY.680.000274
ORF1ab/nsp12738D738YGacTac11AY.690.000187
ORF1ab/nsp12738D738YGacTac11AY.7.10.000113
ORF1ab/nsp12738D738DgaCgaT11AY.7.10.000113
ORF1ab/nsp12738D738DgaCgaT11AY.7.20.000559
ORF1ab/nsp12738D738DgaCgaT11AY.710.000475
ORF1ab/nsp12738D738DgaCgaT11AY.720.001361
ORF1ab/nsp12738D738DgaCgaT11AY.740.000116
ORF1ab/nsp12738D738EgaCgaA11AY.750.000056
ORF1ab/nsp12738D738DgaCgaT11AY.780.001541
ORF1ab/nsp12738D738DgaCgaT11AY.840.000437
ORF1ab/nsp12738D738DgaCgaT11AY.850.000427
ORF1ab/nsp12738D738delGAC---11AY.90.000068
ORF1ab/nsp12738D738YGacTac11AY.9.10.000084
ORF1ab/nsp12738D738DgaCgaT11AY.900.000684
ORF1ab/nsp12738D738EgaCgaA11AY.930.000273
ORF1ab/nsp12738D738DgaCgaT11AY.930.000273
ORF1ab/nsp12738D738YGacTac11AY.940.000443
ORF1ab/nsp12738D738DgaCgaT11AY.950.000761
ORF1ab/nsp12738D738YGacTac11AY.960.002075
ORF1ab/nsp12738D738YGacTac11AY.980.000079
ORF1ab/nsp12738D738NGacAac11AY.98.10.000048
ORF1ab/nsp12738D738DgaCgaT11AY.990.001049
ORF1ab/nsp12738D738EgaCgaA11B0.000128
ORF1ab/nsp12738D738EgaCgaA11B.10.000009
ORF1ab/nsp12738D738del1Gac-ac11B.10.000009
ORF1ab/nsp12738D738AgAcgCc11B.10.000009
ORF1ab/nsp12738D738VgAcgTc11B.10.000009
ORF1ab/nsp12738D738delGAC---11B.10.000009
ORF1ab/nsp12738D738GgAcgGc11B.1.10.000018
ORF1ab/nsp12738D738EgaCgaA11B.1.10.000018
ORF1ab/nsp12738D738VgAcgTc11B.1.10.000018
ORF1ab/nsp12738D738YGacTac11B.1.1.1010.01
ORF1ab/nsp12738D738DgaCgaT11B.1.1.1170.009709
ORF1ab/nsp12738D738EgaCgaA11B.1.1.1170.009709
ORF1ab/nsp12738D738DgaCgaT11B.1.1.1210.002427
ORF1ab/nsp12738D738YGacTac11B.1.1.1340.011364
ORF1ab/nsp12738D738DgaCgaT11B.1.1.1380.006061
ORF1ab/nsp12738D738YGacTac11B.1.1.1590.004673
ORF1ab/nsp12738D738DgaCgaT11B.1.1.1610.003534
ORF1ab/nsp12738D738YGacTac11B.1.1.1720.018182
ORF1ab/nsp12738D738DgaCgaT11B.1.1.1920.002309
ORF1ab/nsp12738D738DgaCgaT11B.1.1.1960.005714
ORF1ab/nsp12738D738DgaCgaT11B.1.1.2200.001859
ORF1ab/nsp12738D738YGacTac11B.1.1.2220.000204
ORF1ab/nsp12738D738YGacTac11B.1.1.2310.003096
ORF1ab/nsp12738D738DgaCgaT11B.1.1.2320.001815
ORF1ab/nsp12738D738DgaCgaT11B.1.1.2410.00207
ORF1ab/nsp12738D738DgaCgaT11B.1.1.250.000569
ORF1ab/nsp12738D738DgaCgaT11B.1.1.2530.002506
ORF1ab/nsp12738D738DgaCgaT11B.1.1.260.005236
ORF1ab/nsp12738D738DgaCgaT11B.1.1.2840.000107
ORF1ab/nsp12738D738YGacTac11B.1.1.2860.002899
ORF1ab/nsp12738D738DgaCgaT11B.1.1.2910.000742
ORF1ab/nsp12738D738DgaCgaT11B.1.1.2940.001266
ORF1ab/nsp12738D738YGacTac11B.1.1.2940.001266
ORF1ab/nsp12738D738DgaCgaT11B.1.1.2980.000862
ORF1ab/nsp12738D738DgaCgaT11B.1.1.3090.005848
ORF1ab/nsp12738D738DgaCgaT11B.1.1.310.066667
ORF1ab/nsp12738D738delGAC---11B.1.1.3110.000358
ORF1ab/nsp12738D738DgaCgaT11B.1.1.3110.000358
ORF1ab/nsp12738D738EgaCgaA11B.1.1.3150.008475
ORF1ab/nsp12738D738DgaCgaT11B.1.1.3220.008772
ORF1ab/nsp12738D738YGacTac11B.1.1.3230.014085
ORF1ab/nsp12738D738DgaCgaT11B.1.1.3690.000446
ORF1ab/nsp12738D738DgaCgaT11B.1.1.370.000193
ORF1ab/nsp12738D738YGacTac11B.1.1.390.00051
ORF1ab/nsp12738D738DgaCgaT11B.1.1.4070.041667
ORF1ab/nsp12738D738DgaCgaT11B.1.1.4130.006897
ORF1ab/nsp12738D738DgaCgaT11B.1.1.4160.000905
ORF1ab/nsp12738D738DgaCgaT11B.1.1.4240.045455
ORF1ab/nsp12738D738YGacTac11B.1.1.4480.002033
ORF1ab/nsp12738D738DgaCgaT11B.1.1.4480.002033
ORF1ab/nsp12738D738DgaCgaT11B.1.1.4640.001473
ORF1ab/nsp12738D738DgaCgaT11B.1.1.510.001718
ORF1ab/nsp12738D738YGacTac11B.1.1.5220.017241
ORF1ab/nsp12738D738DgaCgaT11B.1.1.5260.003546
ORF1ab/nsp12738D738del1Gac-ac11B.1.1.70.000001
ORF1ab/nsp12738D738AgAcgCc11B.1.1.70.000001
ORF1ab/nsp12738D738HGacCac11B.1.1.70.000001
ORF1ab/nsp12738D738NGacAac11B.1.1.700.000341
ORF1ab/nsp12738D738delGAC---11B.1.1.700.000341
ORF1ab/nsp12738D738YGacTac11B.1.1110.001175
ORF1ab/nsp12738D738DgaCgaT11B.1.160.140.002119
ORF1ab/nsp12738D738DgaCgaT11B.1.160.160.000929
ORF1ab/nsp12738D738DgaCgaT11B.1.160.260.002421
ORF1ab/nsp12738D738DgaCgaT11B.1.160.320.004292
ORF1ab/nsp12738D738YGacTac11B.1.1690.014925
ORF1ab/nsp12738D738del2gACg--11B.1.1770.000013
ORF1ab/nsp12738D738YGacTac11B.1.177.120.000152
ORF1ab/nsp12738D738DgaCgaT11B.1.177.150.000631
ORF1ab/nsp12738D738del1gAcg-c11B.1.177.190.001431
ORF1ab/nsp12738D738YGacTac11B.1.177.230.003236
ORF1ab/nsp12738D738DgaCgaT11B.1.177.300.002513
ORF1ab/nsp12738D738YGacTac11B.1.177.450.000381
ORF1ab/nsp12738D738delGAC---11B.1.177.510.004566
ORF1ab/nsp12738D738DgaCgaT11B.1.177.570.000281
ORF1ab/nsp12738D738YGacTac11B.1.177.580.001332
ORF1ab/nsp12738D738DgaCgaT11B.1.177.600.000218
ORF1ab/nsp12738D738YGacTac11B.1.177.650.000665
ORF1ab/nsp12738D738delGAC---11B.1.177.690.001484
ORF1ab/nsp12738D738DgaCgaT11B.1.177.730.000566
ORF1ab/nsp12738D738YGacTac11B.1.177.830.001481
ORF1ab/nsp12738D738YGacTac11B.1.1890.004292
ORF1ab/nsp12738D738NGacAac11B.1.20.000009
ORF1ab/nsp12738D738DgaCgaT11B.1.2100.002132
ORF1ab/nsp12738D738DgaCgaT11B.1.2230.002778
ORF1ab/nsp12738D738HGacCac11B.1.2390.001221
ORF1ab/nsp12738D738NGacAac11B.1.2390.001221
ORF1ab/nsp12738D738NGacAac11B.1.2400.000216
ORF1ab/nsp12738D738DgaCgaT11B.1.2400.000216
ORF1ab/nsp12738D738delGAC---11B.1.2580.000067
ORF1ab/nsp12738D738YGacTac11B.1.2580.000067
ORF1ab/nsp12738D738DgaCgaT11B.1.258.110.000396
ORF1ab/nsp12738D738YGacTac11B.1.2930.0125
ORF1ab/nsp12738D738YGacTac11B.1.3110.000275
ORF1ab/nsp12738D738DgaCgaT11B.1.3500.002933
ORF1ab/nsp12738D738EgaCgaG11B.1.3510.00003
ORF1ab/nsp12738D738YGacTac11B.1.351.20.000303
ORF1ab/nsp12738D738DgaCgaT11B.1.351.30.000876
ORF1ab/nsp12738D738YGacTac11B.1.360.000146
ORF1ab/nsp12738D738AgAcgCc11B.1.36.170.000494
ORF1ab/nsp12738D738DgaCgaT11B.1.36.220.001208
ORF1ab/nsp12738D738DgaCgaT11B.1.36.380.001642
ORF1ab/nsp12738D738DgaCgaT11B.1.36.80.001
ORF1ab/nsp12738D738YGacTac11B.1.3610.001289
ORF1ab/nsp12738D738YGacTac11B.1.3750.00082
ORF1ab/nsp12738D738DgaCgaT11B.1.3900.010638
ORF1ab/nsp12738D738HGacCac11B.1.4000.000429
ORF1ab/nsp12738D738YGacTac11B.1.4000.000429
ORF1ab/nsp12738D738YGacTac11B.1.4020.009804
ORF1ab/nsp12738D738YGacTac11B.1.4090.000781
ORF1ab/nsp12738D738DgaCgaT11B.1.4130.004255
ORF1ab/nsp12738D738DgaCgaT11B.1.4220.000812
ORF1ab/nsp12738D738YGacTac11B.1.4280.00102
ORF1ab/nsp12738D738YGacTac11B.1.4370.020833
ORF1ab/nsp12738D738DgaCgaT11B.1.4560.003268
ORF1ab/nsp12738D738GgAcgGc11B.1.466.20.000391
ORF1ab/nsp12738D738YGacTac11B.1.466.20.000391
ORF1ab/nsp12738D738DgaCgaT11B.1.4710.002732
ORF1ab/nsp12738D738YGacTac11B.1.4990.00105
ORF1ab/nsp12738D738DgaCgaT11B.1.5050.004386
ORF1ab/nsp12738D738DgaCgaT11B.1.5210.004975
ORF1ab/nsp12738D738DgaCgaT11B.1.5240.001406
ORF1ab/nsp12738D738AgAcgCc11B.1.5250.000113
ORF1ab/nsp12738D738DgaCgaT11B.1.5460.003704
ORF1ab/nsp12738D738DgaCgaT11B.1.5580.004566
ORF1ab/nsp12738D738GgAcgGc11B.1.5610.000397
ORF1ab/nsp12738D738DgaCgaT11B.1.5650.00081
ORF1ab/nsp12738D738YGacTac11B.1.575.10.002439
ORF1ab/nsp12738D738YGacTac11B.1.5770.000687
ORF1ab/nsp12738D738GgAcgGc11B.1.5870.001898
ORF1ab/nsp12738D738del2gACg--11B.1.5960.000087
ORF1ab/nsp12738D738HGacCac11B.1.617.20.000004
ORF1ab/nsp12738D738delGAC---11B.1.617.20.000004
ORF1ab/nsp12738D738del1Gac-ac11B.1.617.20.000004
ORF1ab/nsp12738D738AgAcgCc11B.1.617.20.000004
ORF1ab/nsp12738D738DgaCgaT11B.1.6200.000946
ORF1ab/nsp12738D738YGacTac11B.1.6210.000089
ORF1ab/nsp12738D738DgaCgaT11B.1.621.10.000506
ORF1ab/nsp12738D738YGacTac11B.1.6270.00202
ORF1ab/nsp12738D738EgaCgaG11B.1.6370.000073
ORF1ab/nsp12738D738DgaCgaT11B.1.670.043478
ORF1ab/nsp12738D738DgaCgaT11B.580.010204
ORF1ab/nsp12738D738EgaCgaA11B.60.00091
ORF1ab/nsp12738D738DgaCgaT11B.60.00091
ORF1ab/nsp12738D738DgaCgaT11C.320.023256
ORF1ab/nsp12738D738GgAcgGc11C.350.000774
ORF1ab/nsp12738D738YGacTac11C.350.000774
ORF1ab/nsp12738D738YGacTac11C.360.000911
ORF1ab/nsp12738D738DgaCgaT11C.36.30.000567
ORF1ab/nsp12738D738DgaCgaT11N.40.004255
ORF1ab/nsp12738D738YGacTac11N.50.001767
ORF1ab/nsp12738D738DgaCgaT11P.1.10.000318
ORF1ab/nsp12738D738DgaCgaT11P.1.100.000269
ORF1ab/nsp12738D738DgaCgaT11P.1.20.001156
ORF1ab/nsp12738D738DgaCgaT11P.1.60.001946
ORF1ab/nsp12738D738YGacTac11P.1.80.004785
ORF1ab/nsp12738D738DgaCgaT11P.30.001595
ORF1ab/nsp12738D738DgaCgaT11P.70.004367
ORF1ab/nsp12738D738YGacTac11Q.10.000126
ORF1ab/nsp12738D738delGAC---11Q.10.000126
ORF1ab/nsp12738D738DgaCgaT11Q.10.000126
ORF1ab/nsp12738D738YGacTac11Q.30.000145
ORF1ab/nsp12738D738DgaCgaT11Q.70.001111
ORF1ab/nsp12738D738YGacTac11Q.80.000165
ORF1ab/nsp12738D738YGacTac11R.10.00009