CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 734

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12734N734NN5126NsynaaTaaC14481448115640-15642
ORF1ab/nsp12734N734SN5126SnonsynaAtaGt377377115640-15642
ORF1ab/nsp12734N734DN5126DnonsynAatGat3593580.99721415640-15642
ORF1ab/nsp12734N734DN5126DnonsynAaTGaC35910.0027855215640-15642
ORF1ab/nsp12734N734TN5126TnonsynaAtaCt1191170.98319315640-15642
ORF1ab/nsp12734N734TN5126TnonsynaATaCC11920.016806715640-15642
ORF1ab/nsp12734N734YN5126YnonsynAatTat5656115640-15642
ORF1ab/nsp12734N734delN5126deldelAAT---2525115640-15642
ORF1ab/nsp12734N734HN5126HnonsynAatCat1111115640-15642
ORF1ab/nsp12734N734KN5126KnonsynaaTaaG950.55555615640-15642
ORF1ab/nsp12734N734KN5126KnonsynaaTaaA940.44444415640-15642
ORF1ab/nsp12734N734IN5126InonsynaAtaTt22115640-15642
ORF1ab/nsp12734N734FN5126FnonsynAAtTTt11115640-15642
ORF1ab/nsp12734N734del1N5126del1delAat-at11115640-15642

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12734N734NaaTaaC14481448All0.000277
ORF1ab/nsp12734N734NaaTaaC12061206B.1.1.3480.960191
ORF1ab/nsp12734N734SaAtaGt377377All0.000072
ORF1ab/nsp12734N734DAatGat358359All0.000068
ORF1ab/nsp12734N734DAaTGaC1359All0
ORF1ab/nsp12734N734SaAtaGt174174AY.250.001047
ORF1ab/nsp12734N734DAatGat127127B.1.1.70.000114
ORF1ab/nsp12734N734TaAtaCt117119All0.000022
ORF1ab/nsp12734N734TaATaCC2119All0
ORF1ab/nsp12734N734DAatGat9293C.370.010678
ORF1ab/nsp12734N734DAaTGaC193C.370.000116
ORF1ab/nsp12734N734NaaTaaC6363B.1.10.001143
ORF1ab/nsp12734N734YAatTat5656All0.000011
ORF1ab/nsp12734N734TaAtaCt5555P.10.000866
ORF1ab/nsp12734N734SaAtaGt4242B.1.1.70.000038
ORF1ab/nsp12734N734SaAtaGt3939AY.1030.000242
ORF1ab/nsp12734N734NaaTaaC3636B.10.00033
ORF1ab/nsp12734N734DAatGat2727B.1.5760.024479
ORF1ab/nsp12734N734delAAT---2525All0.000005
ORF1ab/nsp12734N734TaAtaCt2525B.1.1.70.000022
ORF1ab/nsp12734N734DAatGat2424B.1.177.170.019704
ORF1ab/nsp12734N734SaAtaGt1313B.1.20.000114
ORF1ab/nsp12734N734YAatTat1313B.1.4290.000306
ORF1ab/nsp12734N734SaAtaGt1313P.1.140.000621
ORF1ab/nsp12734N734DAatGat1212B.1.617.20.000045
ORF1ab/nsp12734N734HAatCat1111All0.000002
ORF1ab/nsp12734N734NaaTaaC1111AY.140.000968
ORF1ab/nsp12734N734NaaTaaC1111B.1.1.3070.027848
ORF1ab/nsp12734N734delAAT---1111B.1.1.70.00001
ORF1ab/nsp12734N734NaaTaaC1010AY.250.00006
ORF1ab/nsp12734N734TaAtaCt1010AY.40.000016
ORF1ab/nsp12734N734NaaTaaC1010AY.90.000676
ORF1ab/nsp12734N734DAatGat1010B.1.2580.000665
ORF1ab/nsp12734N734KaaTaaG59All0.000001
ORF1ab/nsp12734N734KaaTaaA49All0.000001
ORF1ab/nsp12734N734SaAtaGt99B.1.5250.001018
ORF1ab/nsp12734N734NaaTaaC99B.1.617.20.000034
ORF1ab/nsp12734N734SaAtaGt88B.1.617.20.00003
ORF1ab/nsp12734N734NaaTaaC77AY.40.000011
ORF1ab/nsp12734N734YAatTat77B.1.1.70.000006
ORF1ab/nsp12734N734YAatTat77B.1.3290.004253
ORF1ab/nsp12734N734YAatTat77B.1.5260.000165
ORF1ab/nsp12734N734SaAtaGt77P.10.00011
ORF1ab/nsp12734N734SaAtaGt77W.40.009459
ORF1ab/nsp12734N734SaAtaGt66AY.40.000009
ORF1ab/nsp12734N734NaaTaaC66B.1.1.70.000005
ORF1ab/nsp12734N734DAatGat66B.1.177.70.000989
ORF1ab/nsp12734N734DAatGat66B.1.20.000053
ORF1ab/nsp12734N734DAatGat66B.1.4000.002574
ORF1ab/nsp12734N734NaaTaaC55AY.30.00005
ORF1ab/nsp12734N734DAatGat55B.10.000046
ORF1ab/nsp12734N734SaAtaGt44AY.50.000083
ORF1ab/nsp12734N734TaAtaCt44AY.9.20.000147
ORF1ab/nsp12734N734SaAtaGt44AY.98.10.000194
ORF1ab/nsp12734N734SaAtaGt44B.10.000037
ORF1ab/nsp12734N734NaaTaaC44B.1.1.2840.00043
ORF1ab/nsp12734N734NaaTaaC44B.1.1.4170.010811
ORF1ab/nsp12734N734NaaTaaC44B.1.20.000035
ORF1ab/nsp12734N734SaAtaGt44B.1.6340.013699
ORF1ab/nsp12734N734DAatGat33AY.1030.000019
ORF1ab/nsp12734N734TaAtaCt33AY.1200.000112
ORF1ab/nsp12734N734DAatGat33AY.1210.000406
ORF1ab/nsp12734N734TaAtaCt33AY.250.000018
ORF1ab/nsp12734N734SaAtaGt33AY.390.000074
ORF1ab/nsp12734N734DAatGat33AY.40.000005
ORF1ab/nsp12734N734KaaTaaG33AY.40.000005
ORF1ab/nsp12734N734HAatCat33AY.470.000093
ORF1ab/nsp12734N734NaaTaaC33AY.98.10.000145
ORF1ab/nsp12734N734YAatTat33B.10.000027
ORF1ab/nsp12734N734NaaTaaC33B.1.1.1800.032258
ORF1ab/nsp12734N734YAatTat33B.1.1.250.001706
ORF1ab/nsp12734N734NaaTaaC33B.1.1.2690.00406
ORF1ab/nsp12734N734NaaTaaC33B.1.1.3040.008427
ORF1ab/nsp12734N734DAatGat33B.1.3510.000089
ORF1ab/nsp12734N734TaAtaCt33B.1.360.000438
ORF1ab/nsp12734N734SaAtaGt33B.1.36.170.001482
ORF1ab/nsp12734N734DAatGat33B.1.4290.000071
ORF1ab/nsp12734N734NaaTaaC33P.20.00056
ORF1ab/nsp12734N734HAatCat220.111111
ORF1ab/nsp12734N734TaATaCC220.111111
ORF1ab/nsp12734N734KaaTaaG220.111111
ORF1ab/nsp12734N734NaaTaaC22AE.80.000978
ORF1ab/nsp12734N734IaAtaTt22All0
ORF1ab/nsp12734N734SaAtaGt22AY.1020.000053
ORF1ab/nsp12734N734TaAtaCt22AY.200.000078
ORF1ab/nsp12734N734YAatTat22AY.250.000012
ORF1ab/nsp12734N734DAatGat22AY.250.000012
ORF1ab/nsp12734N734SaAtaGt22AY.260.000057
ORF1ab/nsp12734N734DAatGat22AY.30.00002
ORF1ab/nsp12734N734NaaTaaC22AY.39.10.000079
ORF1ab/nsp12734N734HAatCat22AY.40.000003
ORF1ab/nsp12734N734NaaTaaC22AY.420.00008
ORF1ab/nsp12734N734SaAtaGt22AY.440.000012
ORF1ab/nsp12734N734SaAtaGt22AY.990.002099
ORF1ab/nsp12734N734SaAtaGt22AY.99.10.003106
ORF1ab/nsp12734N734delAAT---22B.10.000018
ORF1ab/nsp12734N734YAatTat22B.1.10.000036
ORF1ab/nsp12734N734DAatGat22B.1.10.000036
ORF1ab/nsp12734N734SaAtaGt22B.1.10.000036
ORF1ab/nsp12734N734NaaTaaC22B.1.1.1740.006757
ORF1ab/nsp12734N734YAatTat22B.1.1.2790.002242
ORF1ab/nsp12734N734NaaTaaC22B.1.1.280.000622
ORF1ab/nsp12734N734SaAtaGt22B.1.1.3120.003824
ORF1ab/nsp12734N734SaAtaGt22B.1.1770.000026
ORF1ab/nsp12734N734NaaTaaC22B.1.2430.000139
ORF1ab/nsp12734N734SaAtaGt22B.1.4000.000858
ORF1ab/nsp12734N734DAatGat22B.1.4280.002041
ORF1ab/nsp12734N734DAatGat22B.1.438.10.000215
ORF1ab/nsp12734N734DAatGat22B.1.466.20.000782
ORF1ab/nsp12734N734DAatGat22B.1.5260.000047
ORF1ab/nsp12734N734SaAtaGt22B.1.5260.000047
ORF1ab/nsp12734N734SaAtaGt22B.1.564.10.003155
ORF1ab/nsp12734N734delAAT---22B.1.617.20.000008
ORF1ab/nsp12734N734YAatTat22P.10.000032
ORF1ab/nsp12734N734DAatGat22P.10.000032
ORF1ab/nsp12734N734TaAtaCt22P.1.140.000096
ORF1ab/nsp12734N734NaaTaaC22Q.30.00029
ORF1ab/nsp12734N734IaAtaTt11A0.000387
ORF1ab/nsp12734N734del1Aat-at11All0
ORF1ab/nsp12734N734FAAtTTt11All0
ORF1ab/nsp12734N734NaaTaaC11AY.1020.000027
ORF1ab/nsp12734N734YAatTat11AY.1030.000006
ORF1ab/nsp12734N734SaAtaGt11AY.1070.000466
ORF1ab/nsp12734N734TaAtaCt11AY.1100.000113
ORF1ab/nsp12734N734NaaTaaC11AY.230.00007
ORF1ab/nsp12734N734YAatTat11AY.30.00001
ORF1ab/nsp12734N734KaaTaaA11AY.30.00001
ORF1ab/nsp12734N734FAAtTTt11AY.300.000396
ORF1ab/nsp12734N734NaaTaaC11AY.390.000025
ORF1ab/nsp12734N734delAAT---11AY.40.000002
ORF1ab/nsp12734N734YAatTat11AY.40.000002
ORF1ab/nsp12734N734NaaTaaC11AY.4.20.000022
ORF1ab/nsp12734N734TaAtaCt11AY.4.20.000022
ORF1ab/nsp12734N734DAatGat11AY.4.30.000842
ORF1ab/nsp12734N734delAAT---11AY.4.50.000107
ORF1ab/nsp12734N734KaaTaaA11AY.430.000004
ORF1ab/nsp12734N734TaAtaCt11AY.440.000006
ORF1ab/nsp12734N734NaaTaaC11AY.440.000006
ORF1ab/nsp12734N734NaaTaaC11AY.450.000122
ORF1ab/nsp12734N734SaAtaGt11AY.470.000031
ORF1ab/nsp12734N734NaaTaaC11AY.50.000021
ORF1ab/nsp12734N734YAatTat11AY.50.000021
ORF1ab/nsp12734N734TaAtaCt11AY.50.000021
ORF1ab/nsp12734N734DAatGat11AY.50.000021
ORF1ab/nsp12734N734SaAtaGt11AY.590.00053
ORF1ab/nsp12734N734DAatGat11AY.60.000041
ORF1ab/nsp12734N734KaaTaaA11AY.670.000464
ORF1ab/nsp12734N734NaaTaaC11AY.7.10.000113
ORF1ab/nsp12734N734NaaTaaC11AY.730.000665
ORF1ab/nsp12734N734SaAtaGt11AY.75.10.00018
ORF1ab/nsp12734N734SaAtaGt11AY.820.001357
ORF1ab/nsp12734N734delAAT---11AY.90.000068
ORF1ab/nsp12734N734SaAtaGt11AY.9.20.000037
ORF1ab/nsp12734N734YAatTat11AY.99.20.000092
ORF1ab/nsp12734N734NaaTaaC11B0.000128
ORF1ab/nsp12734N734SaAtaGt11B0.000128
ORF1ab/nsp12734N734TaAtaCt11B0.000128
ORF1ab/nsp12734N734DAatGat11B0.000128
ORF1ab/nsp12734N734TaAtaCt11B.10.000009
ORF1ab/nsp12734N734del1Aat-at11B.1.10.000018
ORF1ab/nsp12734N734NaaTaaC11B.1.1.10.000327
ORF1ab/nsp12734N734NaaTaaC11B.1.1.100.001115
ORF1ab/nsp12734N734NaaTaaC11B.1.1.1710.003676
ORF1ab/nsp12734N734NaaTaaC11B.1.1.1980.001468
ORF1ab/nsp12734N734NaaTaaC11B.1.1.2140.000055
ORF1ab/nsp12734N734NaaTaaC11B.1.1.2200.001859
ORF1ab/nsp12734N734delAAT---11B.1.1.3110.000358
ORF1ab/nsp12734N734TaAtaCt11B.1.1.3540.004386
ORF1ab/nsp12734N734NaaTaaC11B.1.1.3980.003226
ORF1ab/nsp12734N734NaaTaaC11B.1.1.4160.000905
ORF1ab/nsp12734N734NaaTaaC11B.1.1.4420.018519
ORF1ab/nsp12734N734NaaTaaC11B.1.1.4620.008621
ORF1ab/nsp12734N734DAatGat11B.1.1.500.000679
ORF1ab/nsp12734N734NaaTaaC11B.1.1.5140.038462
ORF1ab/nsp12734N734DAatGat11B.1.1.5190.00004
ORF1ab/nsp12734N734SaAtaGt11B.1.1.5190.00004
ORF1ab/nsp12734N734DAatGat11B.1.1.5250.005464
ORF1ab/nsp12734N734SaAtaGt11B.1.1.5260.003546
ORF1ab/nsp12734N734delAAT---11B.1.1.700.000341
ORF1ab/nsp12734N734NaaTaaC11B.1.1.890.006061
ORF1ab/nsp12734N734delAAT---11B.1.1770.000013
ORF1ab/nsp12734N734DAatGat11B.1.1770.000013
ORF1ab/nsp12734N734YAatTat11B.1.1770.000013
ORF1ab/nsp12734N734TaAtaCt11B.1.1770.000013
ORF1ab/nsp12734N734delAAT---11B.1.177.510.004566
ORF1ab/nsp12734N734NaaTaaC11B.1.177.810.000189
ORF1ab/nsp12734N734delAAT---11B.1.177.870.000728
ORF1ab/nsp12734N734YAatTat11B.1.20.000009
ORF1ab/nsp12734N734IaAtaTt11B.1.20.000009
ORF1ab/nsp12734N734KaaTaaA11B.1.20.000009
ORF1ab/nsp12734N734DAatGat11B.1.2210.000071
ORF1ab/nsp12734N734NaaTaaC11B.1.2210.000071
ORF1ab/nsp12734N734HAatCat11B.1.2210.000071
ORF1ab/nsp12734N734NaaTaaC11B.1.230.006061
ORF1ab/nsp12734N734YAatTat11B.1.2320.000537
ORF1ab/nsp12734N734delAAT---11B.1.2580.000067
ORF1ab/nsp12734N734SaAtaGt11B.1.2580.000067
ORF1ab/nsp12734N734NaaTaaC11B.1.258.170.000104
ORF1ab/nsp12734N734TaAtaCt11B.1.36.290.000517
ORF1ab/nsp12734N734NaaTaaC11B.1.3960.000706
ORF1ab/nsp12734N734DAatGat11B.1.416.10.001563
ORF1ab/nsp12734N734SaAtaGt11B.1.4260.001009
ORF1ab/nsp12734N734SaAtaGt11B.1.4270.00005
ORF1ab/nsp12734N734NaaTaaC11B.1.4270.00005
ORF1ab/nsp12734N734TaAtaCt11B.1.5160.001957
ORF1ab/nsp12734N734NaaTaaC11B.1.5350.028571
ORF1ab/nsp12734N734SaAtaGt11B.1.5760.000907
ORF1ab/nsp12734N734HAatCat11B.1.5820.000491
ORF1ab/nsp12734N734NaaTaaC11B.1.6090.000479
ORF1ab/nsp12734N734HAatCat11B.1.617.20.000004
ORF1ab/nsp12734N734SaAtaGt11B.1.6210.000089
ORF1ab/nsp12734N734NaaTaaC11B.1.621.10.000506
ORF1ab/nsp12734N734SaAtaGt11C.370.000116
ORF1ab/nsp12734N734NaaTaaC11C.370.000116
ORF1ab/nsp12734N734DAatGat11D.20.000075
ORF1ab/nsp12734N734HAatCat11P.10.000016
ORF1ab/nsp12734N734NaaTaaC11P.1.160.000374
ORF1ab/nsp12734N734DAatGat11P.1.70.000319
ORF1ab/nsp12734N734delAAT---11Q.10.000126