CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 701

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12701T701TT5093TsynacGacT726264380.88653315541-15543
ORF1ab/nsp12701T701TT5093TsynacGacA72628120.11181515541-15543
ORF1ab/nsp12701T701TT5093TsynacGacC7262120.0016524415541-15543
ORF1ab/nsp12701T701MT5093MnonsynaCgaTg6363115541-15543
ORF1ab/nsp12701T701AT5093AnonsynAcgGcg52490.94230815541-15543
ORF1ab/nsp12701T701AT5093AnonsynAcGGcT5220.038461515541-15543
ORF1ab/nsp12701T701AT5093AnonsynAcGGcA5210.019230815541-15543
ORF1ab/nsp12701T701ST5093SnonsynAcgTcg34200.58823515541-15543
ORF1ab/nsp12701T701ST5093SnonsynAcGTcT3460.17647115541-15543
ORF1ab/nsp12701T701ST5093SnonsynaCGaGT3430.088235315541-15543
ORF1ab/nsp12701T701ST5093SnonsynAcGTcC3420.058823515541-15543
ORF1ab/nsp12701T701ST5093SnonsynAcGTcA3420.058823515541-15543
ORF1ab/nsp12701T701ST5093SnonsynaCGaGC3410.029411815541-15543
ORF1ab/nsp12701T701delT5093deldelACG---1616115541-15543
ORF1ab/nsp12701T701IT5093InonsynaCGaTT1380.61538515541-15543
ORF1ab/nsp12701T701IT5093InonsynaCGaTA1330.23076915541-15543
ORF1ab/nsp12701T701IT5093InonsynaCGaTC1320.15384615541-15543
ORF1ab/nsp12701T701LT5093LnonsynACgTTg1250.41666715541-15543
ORF1ab/nsp12701T701LT5093LnonsynACGCTT1220.16666715541-15543
ORF1ab/nsp12701T701LT5093LnonsynACGTTA1220.16666715541-15543
ORF1ab/nsp12701T701LT5093LnonsynACgCTg1220.16666715541-15543
ORF1ab/nsp12701T701LT5093LnonsynACGCTA1210.083333315541-15543
ORF1ab/nsp12701T701PT5093PnonsynAcgCcg950.55555615541-15543
ORF1ab/nsp12701T701PT5093PnonsynAcGCcT930.33333315541-15543
ORF1ab/nsp12701T701PT5093PnonsynAcGCcA910.11111115541-15543
ORF1ab/nsp12701T701VT5093VnonsynACgGTg850.62515541-15543
ORF1ab/nsp12701T701VT5093VnonsynACGGTT820.2515541-15543
ORF1ab/nsp12701T701VT5093VnonsynACGGTA810.12515541-15543
ORF1ab/nsp12701T701KT5093KnonsynaCgaAg760.85714315541-15543
ORF1ab/nsp12701T701XT5093XnonsynACgTAg750.71428615541-15543
ORF1ab/nsp12701T701KT5093KnonsynaCGaAA710.14285715541-15543
ORF1ab/nsp12701T701XT5093XnonsynACGTAA710.14285715541-15543
ORF1ab/nsp12701T701XT5093XnonsynACGTGA710.14285715541-15543
ORF1ab/nsp12701T701RT5093RnonsynaCgaGg650.83333315541-15543
ORF1ab/nsp12701T701RT5093RnonsynaCGaGA610.16666715541-15543
ORF1ab/nsp12701T701NT5093NnonsynaCGaAT540.815541-15543
ORF1ab/nsp12701T701FT5093FnonsynACGTTT540.815541-15543
ORF1ab/nsp12701T701FT5093FnonsynACGTTC510.215541-15543
ORF1ab/nsp12701T701NT5093NnonsynaCGaAC510.215541-15543
ORF1ab/nsp12701T701del1T5093del1delacGac-430.7515541-15543
ORF1ab/nsp12701T701YT5093YnonsynACGTAT430.7515541-15543
ORF1ab/nsp12701T701CT5093CnonsynACGTGT430.7515541-15543
ORF1ab/nsp12701T701QT5093QnonsynACgCAg430.7515541-15543
ORF1ab/nsp12701T701del1T5093del1delACg-Tg410.2515541-15543
ORF1ab/nsp12701T701YT5093YnonsynACGTAC410.2515541-15543
ORF1ab/nsp12701T701QT5093QnonsynACGCAA410.2515541-15543
ORF1ab/nsp12701T701CT5093CnonsynACGTGC410.2515541-15543
ORF1ab/nsp12701T701WT5093WnonsynACgTGg33115541-15543
ORF1ab/nsp12701T701GT5093GnonsynACgGGg310.33333315541-15543
ORF1ab/nsp12701T701GT5093GnonsynACGGGT310.33333315541-15543
ORF1ab/nsp12701T701GT5093GnonsynACGGGA310.33333315541-15543
ORF1ab/nsp12701T701HT5093HnonsynACGCAT22115541-15543

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12701T701TacGacT64387262All0.001231
ORF1ab/nsp12701T701TacGacA8127262All0.000155
ORF1ab/nsp12701T701TacGacC127262All0.000002
ORF1ab/nsp12701T701TacGacT13511512AY.40.002103
ORF1ab/nsp12701T701TacGacA1591512AY.40.000247
ORF1ab/nsp12701T701TacGacC21512AY.40.000003
ORF1ab/nsp12701T701TacGacT9071121B.1.1.70.000812
ORF1ab/nsp12701T701TacGacA2141121B.1.1.70.000192
ORF1ab/nsp12701T701TacGacT800824AY.250.004812
ORF1ab/nsp12701T701TacGacA24824AY.250.000144
ORF1ab/nsp12701T701TacGacT680680B.1.177.810.128739
ORF1ab/nsp12701T701TacGacT351352R.10.031593
ORF1ab/nsp12701T701TacGacA1352R.10.00009
ORF1ab/nsp12701T701TacGacT219250B.1.617.20.000825
ORF1ab/nsp12701T701TacGacA31250B.1.617.20.000117
ORF1ab/nsp12701T701TacGacT174192AY.430.000771
ORF1ab/nsp12701T701TacGacA18192AY.430.00008
ORF1ab/nsp12701T701TacGacT120121AY.98.10.005812
ORF1ab/nsp12701T701TacGacA1121AY.98.10.000048
ORF1ab/nsp12701T701TacGacT119119AY.46.40.019576
ORF1ab/nsp12701T701TacGacT81100B.10.000742
ORF1ab/nsp12701T701TacGacA18100B.10.000165
ORF1ab/nsp12701T701TacGacC1100B.10.000009
ORF1ab/nsp12701T701TacGacA5299AY.440.000317
ORF1ab/nsp12701T701TacGacT4799AY.440.000286
ORF1ab/nsp12701T701TacGacT9595B.1.177.380.989583
ORF1ab/nsp12701T701TacGacT8791AY.290.001372
ORF1ab/nsp12701T701TacGacA491AY.290.000063
ORF1ab/nsp12701T701TacGacT8090AY.30.000796
ORF1ab/nsp12701T701TacGacA1090AY.30.000099
ORF1ab/nsp12701T701TacGacT8389B.1.1770.001093
ORF1ab/nsp12701T701TacGacA689B.1.1770.000079
ORF1ab/nsp12701T701TacGacT8787B.1.1.2840.009344
ORF1ab/nsp12701T701TacGacA3972B.1.10.000707
ORF1ab/nsp12701T701TacGacT3372B.1.10.000599
ORF1ab/nsp12701T701TacGacT6464B.1.1600.001996
ORF1ab/nsp12701T701MaCgaTg6363All0.000012
ORF1ab/nsp12701T701TacGacA5763B.1.360.008316
ORF1ab/nsp12701T701TacGacT663B.1.360.000875
ORF1ab/nsp12701T701TacGacT6062AY.1020.001591
ORF1ab/nsp12701T701TacGacA262AY.1020.000053
ORF1ab/nsp12701T701TacGacT6062B.1.4290.001412
ORF1ab/nsp12701T701TacGacA262B.1.4290.000047
ORF1ab/nsp12701T701TacGacT4055AY.1030.000248
ORF1ab/nsp12701T701TacGacA1555AY.1030.000093
ORF1ab/nsp12701T701TacGacT5154P.10.000803
ORF1ab/nsp12701T701TacGacA354P.10.000047
ORF1ab/nsp12701T701AAcgGcg4952All0.000009
ORF1ab/nsp12701T701AAcGGcT252All0
ORF1ab/nsp12701T701AAcGGcA152All0
ORF1ab/nsp12701T701TacGacT4349B.1.20.000379
ORF1ab/nsp12701T701TacGacA649B.1.20.000053
ORF1ab/nsp12701T701TacGacT4747B.1.5750.01426
ORF1ab/nsp12701T701TacGacT2839B.1.3510.000832
ORF1ab/nsp12701T701TacGacA1139B.1.3510.000327
ORF1ab/nsp12701T701SAcgTcg2034All0.000004
ORF1ab/nsp12701T701SAcGTcT634All0.000001
ORF1ab/nsp12701T701SaCGaGT334All0.000001
ORF1ab/nsp12701T701SAcGTcA234All0
ORF1ab/nsp12701T701SAcGTcC234All0
ORF1ab/nsp12701T701SaCGaGC134All0
ORF1ab/nsp12701T701AAcgGcg3131AY.440.000189
ORF1ab/nsp12701T701TacGacT2530AY.390.000618
ORF1ab/nsp12701T701TacGacA530AY.390.000124
ORF1ab/nsp12701T701TacGacT2828AY.50.000578
ORF1ab/nsp12701T701TacGacT1727AY.1000.000782
ORF1ab/nsp12701T701TacGacA1027AY.1000.00046
ORF1ab/nsp12701T701TacGacT2626B.1.5820.012758
ORF1ab/nsp12701T701TacGacT2222AY.1200.000818
ORF1ab/nsp12701T701TacGacT2222P.1.170.003559
ORF1ab/nsp12701T701TacGacT1119B.1.4270.000555
ORF1ab/nsp12701T701TacGacA819B.1.4270.000404
ORF1ab/nsp12701T701TacGacT1717B.1.1.3070.043038
ORF1ab/nsp12701T701TacGacT1617B.1.3690.004564
ORF1ab/nsp12701T701TacGacA117B.1.3690.000285
ORF1ab/nsp12701T701TacGacT1717B.1.5090.014719
ORF1ab/nsp12701T701delACG---1616All0.000003
ORF1ab/nsp12701T701TacGacT1216AY.420.000483
ORF1ab/nsp12701T701TacGacA416AY.420.000161
ORF1ab/nsp12701T701TacGacT1616B.1.177.600.003495
ORF1ab/nsp12701T701IaCGaTT813All0.000002
ORF1ab/nsp12701T701IaCGaTA313All0.000001
ORF1ab/nsp12701T701IaCGaTC213All0
ORF1ab/nsp12701T701MaCgaTg1313AY.40.00002
ORF1ab/nsp12701T701LACgTTg512All0.000001
ORF1ab/nsp12701T701LACgCTg212All0
ORF1ab/nsp12701T701LACGTTA212All0
ORF1ab/nsp12701T701LACGCTT212All0
ORF1ab/nsp12701T701LACGCTA112All0
ORF1ab/nsp12701T701TacGacT1112AY.470.000342
ORF1ab/nsp12701T701TacGacA112AY.470.000031
ORF1ab/nsp12701T701TacGacT612AY.9.20.00022
ORF1ab/nsp12701T701TacGacC512AY.9.20.000184
ORF1ab/nsp12701T701TacGacA112AY.9.20.000037
ORF1ab/nsp12701T701MaCgaTg1212B.10.00011
ORF1ab/nsp12701T701TacGacT812B.1.36.220.009662
ORF1ab/nsp12701T701TacGacA412B.1.36.220.004831
ORF1ab/nsp12701T701TacGacT1111AY.1050.007074
ORF1ab/nsp12701T701TacGacA811AY.1180.000501
ORF1ab/nsp12701T701TacGacT311AY.1180.000188
ORF1ab/nsp12701T701TacGacT1011AY.230.000697
ORF1ab/nsp12701T701TacGacA111AY.230.00007
ORF1ab/nsp12701T701TacGacT711AY.3.10.000597
ORF1ab/nsp12701T701TacGacA411AY.3.10.000341
ORF1ab/nsp12701T701SAcgTcg511B.10.000046
ORF1ab/nsp12701T701SAcGTcT211B.10.000018
ORF1ab/nsp12701T701SaCGaGT211B.10.000018
ORF1ab/nsp12701T701SAcGTcA111B.10.000009
ORF1ab/nsp12701T701SAcGTcC111B.10.000009
ORF1ab/nsp12701T701TacGacT910AY.260.000255
ORF1ab/nsp12701T701TacGacA110AY.260.000028
ORF1ab/nsp12701T701TacGacT1010AY.330.000668
ORF1ab/nsp12701T701TacGacT1010AY.450.001217
ORF1ab/nsp12701T701TacGacT1010C.370.001161
ORF1ab/nsp12701T701PAcgCcg59All0.000001
ORF1ab/nsp12701T701PAcGCcT39All0.000001
ORF1ab/nsp12701T701PAcGCcA19All0
ORF1ab/nsp12701T701TacGacT89AY.200.000311
ORF1ab/nsp12701T701TacGacA19AY.200.000039
ORF1ab/nsp12701T701TacGacT79B.1.1.5190.000278
ORF1ab/nsp12701T701TacGacA29B.1.1.5190.000079
ORF1ab/nsp12701T701TacGacT99B.1.466.20.003521
ORF1ab/nsp12701T701TacGacT89B.1.5260.000188
ORF1ab/nsp12701T701TacGacA19B.1.5260.000024
ORF1ab/nsp12701T701VACgGTg58All0.000001
ORF1ab/nsp12701T701VACGGTT28All0
ORF1ab/nsp12701T701VACGGTA18All0
ORF1ab/nsp12701T701TacGacA78AY.1160.002007
ORF1ab/nsp12701T701TacGacT18AY.1160.000287
ORF1ab/nsp12701T701TacGacA78AY.46.60.000505
ORF1ab/nsp12701T701TacGacT18AY.46.60.000072
ORF1ab/nsp12701T701TacGacA88AY.600.007505
ORF1ab/nsp12701T701TacGacT78AY.610.000733
ORF1ab/nsp12701T701TacGacA18AY.610.000105
ORF1ab/nsp12701T701TacGacT68B.1.5960.000523
ORF1ab/nsp12701T701TacGacA28B.1.5960.000174
ORF1ab/nsp12701T701KaCgaAg67All0.000001
ORF1ab/nsp12701T701XACgTAg57All0.000001
ORF1ab/nsp12701T701XACGTAA17All0
ORF1ab/nsp12701T701KaCGaAA17All0
ORF1ab/nsp12701T701XACGTGA17All0
ORF1ab/nsp12701T701TacGacT67AY.4.10.004425
ORF1ab/nsp12701T701TacGacA17AY.4.10.000737
ORF1ab/nsp12701T701TacGacT57AY.4.50.000537
ORF1ab/nsp12701T701TacGacA27AY.4.50.000215
ORF1ab/nsp12701T701TacGacT77AY.460.000729
ORF1ab/nsp12701T701TacGacT77B.1.1.3060.003069
ORF1ab/nsp12701T701delACG---77B.1.1.70.000006
ORF1ab/nsp12701T701RaCgaGg56All0.000001
ORF1ab/nsp12701T701RaCGaGA16All0
ORF1ab/nsp12701T701TacGacT66AY.1170.000507
ORF1ab/nsp12701T701TacGacT56AY.4.20.000108
ORF1ab/nsp12701T701TacGacA16AY.4.20.000022
ORF1ab/nsp12701T701TacGacT66AY.5.30.002024
ORF1ab/nsp12701T701AAcgGcg36B.10.000027
ORF1ab/nsp12701T701AAcGGcT26B.10.000018
ORF1ab/nsp12701T701AAcGGcA16B.10.000009
ORF1ab/nsp12701T701TacGacT66B.1.1.280.001867
ORF1ab/nsp12701T701TacGacT66B.1.1.330.002525
ORF1ab/nsp12701T701TacGacT66B.1.1.700.002046
ORF1ab/nsp12701T701TacGacT66B.1.2210.000426
ORF1ab/nsp12701T701FACGTTT45All0.000001
ORF1ab/nsp12701T701NaCGaAT45All0.000001
ORF1ab/nsp12701T701NaCGaAC15All0
ORF1ab/nsp12701T701FACGTTC15All0
ORF1ab/nsp12701T701TacGacT55AY.116.10.001557
ORF1ab/nsp12701T701TacGacT35AY.1190.000106
ORF1ab/nsp12701T701TacGacA25AY.1190.000071
ORF1ab/nsp12701T701TacGacT45AY.270.000259
ORF1ab/nsp12701T701TacGacA15AY.270.000065
ORF1ab/nsp12701T701TacGacT55AY.4.40.002046
ORF1ab/nsp12701T701PAcgCcg35B.10.000027
ORF1ab/nsp12701T701LACgTTg25B.10.000018
ORF1ab/nsp12701T701PAcGCcT25B.10.000018
ORF1ab/nsp12701T701VACGGTT25B.10.000018
ORF1ab/nsp12701T701VACgGTg25B.10.000018
ORF1ab/nsp12701T701LACGCTT15B.10.000009
ORF1ab/nsp12701T701LACgCTg15B.10.000009
ORF1ab/nsp12701T701LACGTTA15B.10.000009
ORF1ab/nsp12701T701VACGGTA15B.10.000009
ORF1ab/nsp12701T701MaCgaTg55B.1.10.000091
ORF1ab/nsp12701T701SAcGTcT25B.1.10.000036
ORF1ab/nsp12701T701SAcgTcg25B.1.10.000036
ORF1ab/nsp12701T701LACGCTA15B.1.10.000018
ORF1ab/nsp12701T701LACGCTT15B.1.10.000018
ORF1ab/nsp12701T701SAcGTcA15B.1.10.000018
ORF1ab/nsp12701T701LACgTTg15B.1.10.000018
ORF1ab/nsp12701T701LACgCTg15B.1.10.000018
ORF1ab/nsp12701T701LACGTTA15B.1.10.000018
ORF1ab/nsp12701T701TacGacT45B.1.177.40.000844
ORF1ab/nsp12701T701TacGacA15B.1.177.40.000211
ORF1ab/nsp12701T701TacGacT55B.1.177.500.023474
ORF1ab/nsp12701T701TacGacT55B.1.243.20.072464
ORF1ab/nsp12701T701TacGacT55B.1.258.170.00052
ORF1ab/nsp12701T701TacGacT55B.1.2670.092593
ORF1ab/nsp12701T701TacGacT55B.1.6230.002682
ORF1ab/nsp12701T701SAcGTcC15B.1.6270.00202
ORF1ab/nsp12701T701SaCGaGT15B.1.6270.00202
ORF1ab/nsp12701T701SAcGTcT15B.1.6270.00202
ORF1ab/nsp12701T701SAcgTcg15B.1.6270.00202
ORF1ab/nsp12701T701SaCGaGC15B.1.6270.00202
ORF1ab/nsp12701T701TacGacA35P.1.150.000697
ORF1ab/nsp12701T701TacGacT25P.1.150.000465
ORF1ab/nsp12701T701del1acGac-34All0.000001
ORF1ab/nsp12701T701YACGTAT34All0.000001
ORF1ab/nsp12701T701QACgCAg34All0.000001
ORF1ab/nsp12701T701CACGTGT34All0.000001
ORF1ab/nsp12701T701del1ACg-Tg14All0
ORF1ab/nsp12701T701CACGTGC14All0
ORF1ab/nsp12701T701QACGCAA14All0
ORF1ab/nsp12701T701YACGTAC14All0
ORF1ab/nsp12701T701TacGacT44AY.1070.001864
ORF1ab/nsp12701T701TacGacT34AY.1210.000406
ORF1ab/nsp12701T701TacGacA14AY.1210.000135
ORF1ab/nsp12701T701TacGacT44AY.370.001264
ORF1ab/nsp12701T701TacGacA34AY.5.40.00083
ORF1ab/nsp12701T701TacGacT14AY.5.40.000277
ORF1ab/nsp12701T701TacGacT34AY.60.000123
ORF1ab/nsp12701T701TacGacA14AY.60.000041
ORF1ab/nsp12701T701TacGacA24AY.710.00095
ORF1ab/nsp12701T701TacGacC14AY.710.000475
ORF1ab/nsp12701T701TacGacT14AY.710.000475
ORF1ab/nsp12701T701TacGacT34AY.980.000237
ORF1ab/nsp12701T701TacGacA14AY.980.000079
ORF1ab/nsp12701T701IaCGaTT34B.10.000027
ORF1ab/nsp12701T701IaCGaTA14B.10.000009
ORF1ab/nsp12701T701TacGacT44B.1.1.10.001307
ORF1ab/nsp12701T701TacGacT34B.1.1.570.034483
ORF1ab/nsp12701T701TacGacA14B.1.1.570.011494
ORF1ab/nsp12701T701AAcgGcg44B.1.1.70.000004
ORF1ab/nsp12701T701TacGacT44B.1.177.790.009368
ORF1ab/nsp12701T701TacGacT44B.1.36.90.012862
ORF1ab/nsp12701T701TacGacA44B.1.4090.003125
ORF1ab/nsp12701T701TacGacA44B.1.4260.004036
ORF1ab/nsp12701T701TacGacT44B.1.617.10.000516
ORF1ab/nsp12701T701delACG---44B.1.617.20.000015
ORF1ab/nsp12701T701TacGacT44B.1.621.10.002023
ORF1ab/nsp12701T701TacGacT44C.360.003643
ORF1ab/nsp12701T701TacGacT44P.1.140.000191
ORF1ab/nsp12701T701WACgTGg33All0.000001
ORF1ab/nsp12701T701GACGGGT13All0
ORF1ab/nsp12701T701GACGGGA13All0
ORF1ab/nsp12701T701GACgGGg13All0
ORF1ab/nsp12701T701MaCgaTg33AY.1030.000019
ORF1ab/nsp12701T701TacGacT23AY.680.000547
ORF1ab/nsp12701T701TacGacA13AY.680.000274
ORF1ab/nsp12701T701TacGacT23AY.750.000112
ORF1ab/nsp12701T701TacGacA13AY.750.000056
ORF1ab/nsp12701T701KaCgaAg33B.10.000027
ORF1ab/nsp12701T701XACgTAg23B.10.000018
ORF1ab/nsp12701T701RaCgaGg23B.10.000018
ORF1ab/nsp12701T701XACGTGA13B.10.000009
ORF1ab/nsp12701T701GACGGGT13B.10.000009
ORF1ab/nsp12701T701GACGGGA13B.10.000009
ORF1ab/nsp12701T701RaCGaGA13B.10.000009
ORF1ab/nsp12701T701GACgGGg13B.10.000009
ORF1ab/nsp12701T701KaCgaAg23B.1.10.000036
ORF1ab/nsp12701T701XACgTAg23B.1.10.000036
ORF1ab/nsp12701T701PAcGCcT13B.1.10.000018
ORF1ab/nsp12701T701KaCGaAA13B.1.10.000018
ORF1ab/nsp12701T701PAcGCcA13B.1.10.000018
ORF1ab/nsp12701T701XACGTAA13B.1.10.000018
ORF1ab/nsp12701T701PAcgCcg13B.1.10.000018
ORF1ab/nsp12701T701TacGacT33B.1.1.3330.003229
ORF1ab/nsp12701T701TacGacT33B.1.1.390.001529
ORF1ab/nsp12701T701TacGacT23B.1.1.4090.005666
ORF1ab/nsp12701T701TacGacA13B.1.1.4090.002833
ORF1ab/nsp12701T701TacGacT33B.1.1.4280.028302
ORF1ab/nsp12701T701TacGacT33B.1.1.4320.003797
ORF1ab/nsp12701T701MaCgaTg33B.1.1.70.000003
ORF1ab/nsp12701T701TacGacA33B.1.177.830.004444
ORF1ab/nsp12701T701TacGacT33B.1.2340.000396
ORF1ab/nsp12701T701TacGacT13B.1.2400.000216
ORF1ab/nsp12701T701TacGacC13B.1.2400.000216
ORF1ab/nsp12701T701TacGacA13B.1.2400.000216
ORF1ab/nsp12701T701TacGacT33B.1.2430.000209
ORF1ab/nsp12701T701TacGacT33B.1.3960.002117
ORF1ab/nsp12701T701TacGacT33B.1.438.10.000322
ORF1ab/nsp12701T701TacGacA23B.1.5250.000226
ORF1ab/nsp12701T701TacGacT13B.1.5250.000113
ORF1ab/nsp12701T701SAcgTcg33C.36.30.001702
ORF1ab/nsp12701T701TacGacA33P.1.120.001452
ORF1ab/nsp12701T701TacGacT33P.20.00056
ORF1ab/nsp12701T701TacGacT22A.2.50.000998
ORF1ab/nsp12701T701TacGacT22A.240.142857
ORF1ab/nsp12701T701TacGacT22A.280.005291
ORF1ab/nsp12701T701HACGCAT22All0
ORF1ab/nsp12701T701TacGacT22AY.100.00106
ORF1ab/nsp12701T701TacGacT22AY.120.10.000642
ORF1ab/nsp12701T701MaCgaTg22AY.1210.000271
ORF1ab/nsp12701T701TacGacT22AY.140.000176
ORF1ab/nsp12701T701MaCgaTg22AY.290.000032
ORF1ab/nsp12701T701VACgGTg22AY.3.10.000171
ORF1ab/nsp12701T701TacGacT22AY.39.10.000079
ORF1ab/nsp12701T701SAcgTcg22AY.40.000003
ORF1ab/nsp12701T701IaCGaTT22AY.40.000003
ORF1ab/nsp12701T701AAcgGcg22AY.40.000003
ORF1ab/nsp12701T701MaCgaTg22AY.4.20.000043
ORF1ab/nsp12701T701TacGacT22AY.4.2.10.000298
ORF1ab/nsp12701T701TacGacT22AY.400.001929
ORF1ab/nsp12701T701del1acGac-12AY.440.000006
ORF1ab/nsp12701T701del1ACg-Tg12AY.440.000006
ORF1ab/nsp12701T701TacGacT22AY.46.20.001271
ORF1ab/nsp12701T701TacGacT22AY.46.50.000397
ORF1ab/nsp12701T701SAcgTcg22AY.50.000041
ORF1ab/nsp12701T701TacGacT22AY.90.000135
ORF1ab/nsp12701T701TacGacT22AY.970.003401
ORF1ab/nsp12701T701FACGTTT22B.10.000018
ORF1ab/nsp12701T701CACGTGT22B.10.000018
ORF1ab/nsp12701T701QACgCAg22B.10.000018
ORF1ab/nsp12701T701WACgTGg22B.10.000018
ORF1ab/nsp12701T701NaCGaAC12B.10.000009
ORF1ab/nsp12701T701NaCGaAT12B.10.000009
ORF1ab/nsp12701T701YACGTAT22B.1.10.000036
ORF1ab/nsp12701T701NaCGaAT22B.1.10.000036
ORF1ab/nsp12701T701IaCGaTA12B.1.10.000018
ORF1ab/nsp12701T701QACgCAg12B.1.10.000018
ORF1ab/nsp12701T701IaCGaTT12B.1.10.000018
ORF1ab/nsp12701T701QACGCAA12B.1.10.000018
ORF1ab/nsp12701T701TacGacT22B.1.1.1700.002494
ORF1ab/nsp12701T701TacGacT22B.1.1.1980.002937
ORF1ab/nsp12701T701TacGacT22B.1.1.2140.000111
ORF1ab/nsp12701T701TacGacT22B.1.1.3110.000716
ORF1ab/nsp12701T701TacGacT22B.1.1.3720.001377
ORF1ab/nsp12701T701SAcGTcT12B.1.1.4090.002833
ORF1ab/nsp12701T701SAcgTcg12B.1.1.4090.002833
ORF1ab/nsp12701T701TacGacT22B.1.1.5260.007092
ORF1ab/nsp12701T701TacGacT22B.1.1.5280.009615
ORF1ab/nsp12701T701TacGacT22B.1.177.330.003289
ORF1ab/nsp12701T701TacGacT22B.1.2100.004264
ORF1ab/nsp12701T701IaCGaTC12B.1.2400.000216
ORF1ab/nsp12701T701IaCGaTA12B.1.2400.000216
ORF1ab/nsp12701T701MaCgaTg22B.1.36.290.001035
ORF1ab/nsp12701T701TacGacA22B.1.3810.015625
ORF1ab/nsp12701T701TacGacT12B.1.3980.002976
ORF1ab/nsp12701T701TacGacA12B.1.3980.002976
ORF1ab/nsp12701T701TacGacA22B.1.4560.006536
ORF1ab/nsp12701T701TacGacT22B.1.4590.008163
ORF1ab/nsp12701T701TacGacT22B.1.4680.011429
ORF1ab/nsp12701T701TacGacA12B.1.4700.001404
ORF1ab/nsp12701T701TacGacT12B.1.4700.001404
ORF1ab/nsp12701T701TacGacT22B.1.4970.00063
ORF1ab/nsp12701T701TacGacT22B.1.4990.002101
ORF1ab/nsp12701T701AAcgGcg22B.1.617.20.000008
ORF1ab/nsp12701T701CACGTGC12B.1.6270.00202
ORF1ab/nsp12701T701TacGacC12B.1.6270.00202
ORF1ab/nsp12701T701IaCGaTC12B.1.6270.00202
ORF1ab/nsp12701T701CACGTGT12B.1.6270.00202
ORF1ab/nsp12701T701FACGTTC12B.1.6270.00202
ORF1ab/nsp12701T701TacGacT12B.1.6270.00202
ORF1ab/nsp12701T701FACGTTT12B.1.6270.00202
ORF1ab/nsp12701T701IaCGaTT12B.1.6270.00202
ORF1ab/nsp12701T701TacGacT12B.1.6370.000073
ORF1ab/nsp12701T701TacGacA12B.1.6370.000073
ORF1ab/nsp12701T701TacGacT22C.300.003454
ORF1ab/nsp12701T701TacGacT22P.1.20.002312
ORF1ab/nsp12701T701MaCgaTg110.055556
ORF1ab/nsp12701T701AAcgGcg11A0.000387
ORF1ab/nsp12701T701TacGacT11A0.000387
ORF1ab/nsp12701T701TacGacT11A.2.5.20.001572
ORF1ab/nsp12701T701TacGacT11A.2.5.30.010309
ORF1ab/nsp12701T701TacGacT11AU.30.00211
ORF1ab/nsp12701T701AAcgGcg11AY.1010.00049
ORF1ab/nsp12701T701TacGacA11AY.1010.00049
ORF1ab/nsp12701T701TacGacT11AY.1100.000113
ORF1ab/nsp12701T701TacGacT11AY.1110.000183
ORF1ab/nsp12701T701MaCgaTg11AY.1190.000035
ORF1ab/nsp12701T701TacGacT11AY.120.20.001285
ORF1ab/nsp12701T701TacGacA11AY.130.000161
ORF1ab/nsp12701T701TacGacT11AY.16.10.00047
ORF1ab/nsp12701T701TacGacT11AY.20.000356
ORF1ab/nsp12701T701MaCgaTg11AY.200.000039
ORF1ab/nsp12701T701SAcgTcg11AY.230.00007
ORF1ab/nsp12701T701MaCgaTg11AY.250.000006
ORF1ab/nsp12701T701TacGacT11AY.360.000148
ORF1ab/nsp12701T701TacGacT11AY.380.000499
ORF1ab/nsp12701T701TacGacT11AY.4.30.000842
ORF1ab/nsp12701T701delACG---11AY.4.50.000107
ORF1ab/nsp12701T701MaCgaTg11AY.430.000004
ORF1ab/nsp12701T701MaCgaTg11AY.440.000006
ORF1ab/nsp12701T701MaCgaTg11AY.460.000104
ORF1ab/nsp12701T701TacGacT11AY.480.000465
ORF1ab/nsp12701T701TacGacT11AY.520.000814
ORF1ab/nsp12701T701TacGacT11AY.550.000917
ORF1ab/nsp12701T701TacGacT11AY.570.000656
ORF1ab/nsp12701T701TacGacT11AY.590.00053
ORF1ab/nsp12701T701TacGacT11AY.620.000436
ORF1ab/nsp12701T701TacGacT11AY.650.000533
ORF1ab/nsp12701T701TacGacT11AY.690.000187
ORF1ab/nsp12701T701TacGacT11AY.70.000196
ORF1ab/nsp12701T701TacGacT11AY.7.10.000113
ORF1ab/nsp12701T701TacGacT11AY.700.000209
ORF1ab/nsp12701T701TacGacT11AY.720.001361
ORF1ab/nsp12701T701TacGacT11AY.740.000116
ORF1ab/nsp12701T701delACG---11AY.750.000056
ORF1ab/nsp12701T701AAcgGcg11AY.750.000056
ORF1ab/nsp12701T701TacGacT11AY.840.000437
ORF1ab/nsp12701T701TacGacT11AY.9.10.000084
ORF1ab/nsp12701T701TacGacT11AY.9.2.10.001976
ORF1ab/nsp12701T701TacGacT11AY.900.000684
ORF1ab/nsp12701T701MaCgaTg11AY.980.000079
ORF1ab/nsp12701T701TacGacT11AY.990.001049
ORF1ab/nsp12701T701TacGacT11AY.99.20.000092
ORF1ab/nsp12701T701TacGacT11AZ.20.000821
ORF1ab/nsp12701T701TacGacT11B0.000128
ORF1ab/nsp12701T701HACGCAT11B.10.000009
ORF1ab/nsp12701T701YACGTAC11B.10.000009
ORF1ab/nsp12701T701VACgGTg11B.1.10.000018
ORF1ab/nsp12701T701HACGCAT11B.1.10.000018
ORF1ab/nsp12701T701RaCgaGg11B.1.10.000018
ORF1ab/nsp12701T701FACGTTT11B.1.10.000018
ORF1ab/nsp12701T701LACgTTg11B.1.1.2050.003717
ORF1ab/nsp12701T701SAcgTcg11B.1.1.2050.003717
ORF1ab/nsp12701T701MaCgaTg11B.1.1.2050.003717
ORF1ab/nsp12701T701TacGacT11B.1.1.2160.00089
ORF1ab/nsp12701T701TacGacA11B.1.1.2190.005
ORF1ab/nsp12701T701TacGacT11B.1.1.2210.010101
ORF1ab/nsp12701T701TacGacT11B.1.1.2410.00207
ORF1ab/nsp12701T701TacGacT11B.1.1.250.000569
ORF1ab/nsp12701T701TacGacT11B.1.1.2630.001558
ORF1ab/nsp12701T701TacGacT11B.1.1.2820.011628
ORF1ab/nsp12701T701TacGacT11B.1.1.2910.000742
ORF1ab/nsp12701T701TacGacA11B.1.1.3050.003861
ORF1ab/nsp12701T701delACG---11B.1.1.3110.000358
ORF1ab/nsp12701T701TacGacT11B.1.1.3180.000302
ORF1ab/nsp12701T701TacGacT11B.1.1.3320.03125
ORF1ab/nsp12701T701TacGacT11B.1.1.3680.003086
ORF1ab/nsp12701T701NaCGaAT11B.1.1.4090.002833
ORF1ab/nsp12701T701KaCgaAg11B.1.1.4090.002833
ORF1ab/nsp12701T701MaCgaTg11B.1.1.4090.002833
ORF1ab/nsp12701T701XACgTAg11B.1.1.4090.002833
ORF1ab/nsp12701T701YACGTAT11B.1.1.4090.002833
ORF1ab/nsp12701T701TacGacA11B.1.1.4170.002703
ORF1ab/nsp12701T701TacGacT11B.1.1.4480.002033
ORF1ab/nsp12701T701TacGacT11B.1.1.500.000679
ORF1ab/nsp12701T701TacGacT11B.1.1.5130.012346
ORF1ab/nsp12701T701TacGacT11B.1.1.520.012195
ORF1ab/nsp12701T701AAcgGcg11B.1.1.5230.001563
ORF1ab/nsp12701T701TacGacA11B.1.1.540.003021
ORF1ab/nsp12701T701IaCGaTT11B.1.1.70.000001
ORF1ab/nsp12701T701PAcgCcg11B.1.1.70.000001
ORF1ab/nsp12701T701TacGacT11B.1.1.830.00271
ORF1ab/nsp12701T701TacGacT11B.1.1040.00369
ORF1ab/nsp12701T701TacGacT11B.1.110.30.000718
ORF1ab/nsp12701T701TacGacT11B.1.1180.006711
ORF1ab/nsp12701T701TacGacT11B.1.1200.007692
ORF1ab/nsp12701T701TacGacA11B.1.1310.008772
ORF1ab/nsp12701T701TacGacT11B.1.160.150.00495
ORF1ab/nsp12701T701TacGacT11B.1.160.300.002976
ORF1ab/nsp12701T701MaCgaTg11B.1.1660.008475
ORF1ab/nsp12701T701TacGacT11B.1.1700.00431
ORF1ab/nsp12701T701AAcgGcg11B.1.1770.000013
ORF1ab/nsp12701T701MaCgaTg11B.1.1770.000013
ORF1ab/nsp12701T701TacGacT11B.1.177.350.000691
ORF1ab/nsp12701T701TacGacT11B.1.177.430.001477
ORF1ab/nsp12701T701TacGacA11B.1.177.440.000519
ORF1ab/nsp12701T701TacGacT11B.1.177.70.000165
ORF1ab/nsp12701T701TacGacT11B.1.177.860.000183
ORF1ab/nsp12701T701TacGacT11B.1.1950.005025
ORF1ab/nsp12701T701TacGacT11B.1.1980.071429
ORF1ab/nsp12701T701MaCgaTg11B.1.20.000009
ORF1ab/nsp12701T701TacGacT11B.1.2030.0625
ORF1ab/nsp12701T701TacGacT11B.1.214.10.02
ORF1ab/nsp12701T701TacGacT11B.1.214.20.0006
ORF1ab/nsp12701T701TacGacT11B.1.220.001318
ORF1ab/nsp12701T701TacGacT11B.1.2230.002778
ORF1ab/nsp12701T701MaCgaTg11B.1.2340.000132
ORF1ab/nsp12701T701TacGacT11B.1.2370.004975
ORF1ab/nsp12701T701MaCgaTg11B.1.2400.000216
ORF1ab/nsp12701T701TacGacT11B.1.2580.000067
ORF1ab/nsp12701T701TacGacT11B.1.258.140.00098
ORF1ab/nsp12701T701AAcgGcg11B.1.258.170.000104
ORF1ab/nsp12701T701TacGacA11B.1.3010.005917
ORF1ab/nsp12701T701TacGacT11B.1.3110.000275
ORF1ab/nsp12701T701TacGacA11B.1.351.30.000876
ORF1ab/nsp12701T701TacGacA11B.1.36.170.000494
ORF1ab/nsp12701T701del1acGac-11B.1.36.290.000517
ORF1ab/nsp12701T701TacGacT11B.1.36.290.000517
ORF1ab/nsp12701T701TacGacT11B.1.36.360.000602
ORF1ab/nsp12701T701TacGacT11B.1.3660.004878
ORF1ab/nsp12701T701SAcgTcg11B.1.4160.001269
ORF1ab/nsp12701T701TacGacT11B.1.4250.002994
ORF1ab/nsp12701T701TacGacT11B.1.4360.001029
ORF1ab/nsp12701T701TacGacT11B.1.4650.003802
ORF1ab/nsp12701T701TacGacT11B.1.4920.007042
ORF1ab/nsp12701T701MaCgaTg11B.1.5090.000866
ORF1ab/nsp12701T701TacGacC11B.1.5330.009615
ORF1ab/nsp12701T701TacGacT11B.1.5380.008065
ORF1ab/nsp12701T701TacGacT11B.1.5390.017544
ORF1ab/nsp12701T701TacGacA11B.1.5490.007194
ORF1ab/nsp12701T701SAcgTcg11B.1.5640.000426
ORF1ab/nsp12701T701TacGacT11B.1.5740.002151
ORF1ab/nsp12701T701TacGacA11B.1.5770.000687
ORF1ab/nsp12701T701TacGacT11B.1.5950.000261
ORF1ab/nsp12701T701TacGacT11B.1.5990.00365
ORF1ab/nsp12701T701TacGacT11B.1.6090.000479
ORF1ab/nsp12701T701TacGacT11B.1.619.10.000641
ORF1ab/nsp12701T701WACgTGg11B.1.6270.00202
ORF1ab/nsp12701T701MaCgaTg11B.1.6270.00202
ORF1ab/nsp12701T701RaCgaGg11B.1.6270.00202
ORF1ab/nsp12701T701LACgTTg11B.1.6270.00202
ORF1ab/nsp12701T701TacGacT11B.1.6350.017544
ORF1ab/nsp12701T701TacGacT11B.320.027027
ORF1ab/nsp12701T701TacGacT11B.400.000364
ORF1ab/nsp12701T701MaCgaTg11B.520.010101
ORF1ab/nsp12701T701TacGacT11C.140.004329
ORF1ab/nsp12701T701TacGacT11C.160.00106
ORF1ab/nsp12701T701TacGacT11C.170.055556
ORF1ab/nsp12701T701delACG---11C.170.055556
ORF1ab/nsp12701T701TacGacT11C.280.04
ORF1ab/nsp12701T701TacGacT11C.36.30.000567
ORF1ab/nsp12701T701RaCgaGg11D.20.000075
ORF1ab/nsp12701T701MaCgaTg11D.20.000075
ORF1ab/nsp12701T701TacGacA11D.20.000075
ORF1ab/nsp12701T701del1acGac-11D.20.000075
ORF1ab/nsp12701T701TacGacT11P.1.60.001946
ORF1ab/nsp12701T701TacGacT11P.1.70.000319
ORF1ab/nsp12701T701TacGacA11Q.10.000126
ORF1ab/nsp12701T701AAcgGcg11Q.30.000145
ORF1ab/nsp12701T701delACG---11Q.80.000165
ORF1ab/nsp12701T701TacGacT11Q.80.000165