CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 647

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12647S647IS5039InonsynaGcaTc57045704115379-15381
ORF1ab/nsp12647S647SS5039SsynagCagT632632115379-15381
ORF1ab/nsp12647S647GS5039GnonsynAgcGgc291291115379-15381
ORF1ab/nsp12647S647NS5039NnonsynaGcaAc1521510.99342115379-15381
ORF1ab/nsp12647S647NS5039NnonsynaGCaAT15210.0065789515379-15381
ORF1ab/nsp12647S647RS5039RnonsynagCagA79740.93670915379-15381
ORF1ab/nsp12647S647RS5039RnonsynagCagG7940.050632915379-15381
ORF1ab/nsp12647S647RS5039RnonsynAgcCgc7910.012658215379-15381
ORF1ab/nsp12647S647TS5039TnonsynaGcaCc3030115379-15381
ORF1ab/nsp12647S647delS5039deldelAGC---1313115379-15381
ORF1ab/nsp12647S647KS5039KnonsynaGCaAA12110.91666715379-15381
ORF1ab/nsp12647S647KS5039KnonsynaGCaAG1210.083333315379-15381
ORF1ab/nsp12647S647CS5039CnonsynAgcTgc760.85714315379-15381
ORF1ab/nsp12647S647CS5039CnonsynAgCTgT710.14285715379-15381
ORF1ab/nsp12647S647YS5039YnonsynAGCTAT210.515379-15381
ORF1ab/nsp12647S647YS5039YnonsynAGcTAc210.515379-15381
ORF1ab/nsp12647S647ES5039EnonsynAGCGAA11115379-15381
ORF1ab/nsp12647S647WS5039WnonsynAgCTgG11115379-15381
ORF1ab/nsp12647S647XS5039XnonsynAGCTAG11115379-15381

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12647S647IaGcaTc57045704All0.001091
ORF1ab/nsp12647S647IaGcaTc10621062AY.40.001653
ORF1ab/nsp12647S647IaGcaTc679679AY.860.563485
ORF1ab/nsp12647S647SagCagT632632All0.000121
ORF1ab/nsp12647S647IaGcaTc475475B.1.617.20.001789
ORF1ab/nsp12647S647IaGcaTc469469B.1.1.70.00042
ORF1ab/nsp12647S647IaGcaTc309309B.1.1.3010.364387
ORF1ab/nsp12647S647GAgcGgc291291All0.000056
ORF1ab/nsp12647S647SagCagT284284B.1.1.70.000254
ORF1ab/nsp12647S647IaGcaTc238238B.10.00218
ORF1ab/nsp12647S647IaGcaTc233233AY.430.001032
ORF1ab/nsp12647S647NaGcaAc151152All0.000029
ORF1ab/nsp12647S647NaGCaAT1152All0
ORF1ab/nsp12647S647IaGcaTc130130AY.1030.000807
ORF1ab/nsp12647S647GAgcGgc120120B.1.1.70.000107
ORF1ab/nsp12647S647IaGcaTc110110B.1.1110.12926
ORF1ab/nsp12647S647IaGcaTc100100AY.250.000601
ORF1ab/nsp12647S647IaGcaTc8484AY.190.095781
ORF1ab/nsp12647S647IaGcaTc8484B.1.20.00074
ORF1ab/nsp12647S647RagCagA7479All0.000014
ORF1ab/nsp12647S647RagCagG479All0.000001
ORF1ab/nsp12647S647RAgcCgc179All0
ORF1ab/nsp12647S647IaGcaTc7979AY.440.000481
ORF1ab/nsp12647S647IaGcaTc7474B.1.1.510.127148
ORF1ab/nsp12647S647IaGcaTc6464AY.260.001812
ORF1ab/nsp12647S647IaGcaTc6363B.1.1.2160.0561
ORF1ab/nsp12647S647IaGcaTc5959B.1.416.10.092188
ORF1ab/nsp12647S647SagCagT5959B.1.617.20.000222
ORF1ab/nsp12647S647IaGcaTc5757B.1.177.210.004359
ORF1ab/nsp12647S647IaGcaTc5454B.1.10.00098
ORF1ab/nsp12647S647IaGcaTc5454B.1.4290.001271
ORF1ab/nsp12647S647IaGcaTc5050AY.980.00395
ORF1ab/nsp12647S647IaGcaTc4545AY.1020.001193
ORF1ab/nsp12647S647IaGcaTc4242AY.50.000867
ORF1ab/nsp12647S647RagCagA3838B.1.1.5190.001509
ORF1ab/nsp12647S647IaGcaTc3636AY.330.002404
ORF1ab/nsp12647S647SagCagT3535AY.1020.000928
ORF1ab/nsp12647S647SagCagT3535AY.40.000054
ORF1ab/nsp12647S647NaGcaAc3535B.1.1.70.000031
ORF1ab/nsp12647S647IaGcaTc3434AY.390.00084
ORF1ab/nsp12647S647IaGcaTc3333P.10.00052
ORF1ab/nsp12647S647SagCagT3232P.1.140.00153
ORF1ab/nsp12647S647IaGcaTc3131AY.30.000308
ORF1ab/nsp12647S647TaGcaCc3030All0.000006
ORF1ab/nsp12647S647IaGcaTc3030AY.200.001166
ORF1ab/nsp12647S647IaGcaTc2828B.1.1.280.008715
ORF1ab/nsp12647S647IaGcaTc2727AY.1130.003845
ORF1ab/nsp12647S647IaGcaTc2727B.1.1.4320.034177
ORF1ab/nsp12647S647IaGcaTc2626AY.99.20.002396
ORF1ab/nsp12647S647GAgcGgc2424AY.40.000037
ORF1ab/nsp12647S647IaGcaTc2323AY.46.60.001661
ORF1ab/nsp12647S647NaGcaAc2323AY.470.000715
ORF1ab/nsp12647S647SagCagT2121AY.250.000126
ORF1ab/nsp12647S647NaGcaAc2121AY.9.20.000771
ORF1ab/nsp12647S647IaGcaTc2121B.1.1.2770.015933
ORF1ab/nsp12647S647GAgcGgc2020AY.250.00012
ORF1ab/nsp12647S647IaGcaTc2020AY.470.000622
ORF1ab/nsp12647S647NaGcaAc1919B.1.3690.005419
ORF1ab/nsp12647S647IaGcaTc1919B.1.5250.00215
ORF1ab/nsp12647S647IaGcaTc1818B.1.1.2140.000998
ORF1ab/nsp12647S647IaGcaTc1818B.1.2430.001253
ORF1ab/nsp12647S647IaGcaTc1717B.1.1770.000224
ORF1ab/nsp12647S647IaGcaTc1717B.1.617.10.002192
ORF1ab/nsp12647S647IaGcaTc1616B.1.1.3060.007014
ORF1ab/nsp12647S647IaGcaTc1515AY.360.002223
ORF1ab/nsp12647S647IaGcaTc1515AY.420.000603
ORF1ab/nsp12647S647IaGcaTc1414B.1.6330.583333
ORF1ab/nsp12647S647delAGC---1313All0.000002
ORF1ab/nsp12647S647GAgcGgc1313AY.23.10.005426
ORF1ab/nsp12647S647GAgcGgc1313AY.440.000079
ORF1ab/nsp12647S647IaGcaTc1313AY.650.00693
ORF1ab/nsp12647S647KaGCaAA1112All0.000002
ORF1ab/nsp12647S647KaGCaAG112All0
ORF1ab/nsp12647S647IaGcaTc1212AU.10.01519
ORF1ab/nsp12647S647SagCagT1212AY.1030.000075
ORF1ab/nsp12647S647IaGcaTc1212AY.9.20.000441
ORF1ab/nsp12647S647SagCagT1212B.1.20.000106
ORF1ab/nsp12647S647IaGcaTc1111B.1.3510.000327
ORF1ab/nsp12647S647IaGcaTc1010AY.1080.011025
ORF1ab/nsp12647S647SagCagT1010AY.430.000044
ORF1ab/nsp12647S647IaGcaTc1010AY.460.001041
ORF1ab/nsp12647S647SagCagT1010AY.50.000206
ORF1ab/nsp12647S647KaGCaAA1010B.1.160.280.02924
ORF1ab/nsp12647S647IaGcaTc1010B.1.360.001459
ORF1ab/nsp12647S647IaGcaTc1010B.1.36.170.004941
ORF1ab/nsp12647S647IaGcaTc1010D.20.00075
ORF1ab/nsp12647S647IaGcaTc1010P.1.170.001618
ORF1ab/nsp12647S647IaGcaTc1010P.20.001866
ORF1ab/nsp12647S647IaGcaTc99AM.11
ORF1ab/nsp12647S647IaGcaTc99AY.290.000142
ORF1ab/nsp12647S647IaGcaTc99AY.540.000858
ORF1ab/nsp12647S647SagCagT99B.10.000082
ORF1ab/nsp12647S647GAgcGgc99B.1.1.470.048128
ORF1ab/nsp12647S647TaGcaCc99B.1.1770.000119
ORF1ab/nsp12647S647IaGcaTc99B.1.177.560.006008
ORF1ab/nsp12647S647IaGcaTc99B.1.5260.000212
ORF1ab/nsp12647S647GAgcGgc99B.1.5880.008189
ORF1ab/nsp12647S647NaGcaAc88AY.40.000012
ORF1ab/nsp12647S647IaGcaTc88AY.4.20.000174
ORF1ab/nsp12647S647IaGcaTc88AY.450.000973
ORF1ab/nsp12647S647GAgcGgc88AY.470.000249
ORF1ab/nsp12647S647IaGcaTc88AY.98.10.000387
ORF1ab/nsp12647S647RagCagA88B.10.000073
ORF1ab/nsp12647S647IaGcaTc88B.1.1.3680.024691
ORF1ab/nsp12647S647CAgcTgc67All0.000001
ORF1ab/nsp12647S647CAgCTgT17All0
ORF1ab/nsp12647S647GAgcGgc77AY.1030.000043
ORF1ab/nsp12647S647IaGcaTc77AY.140.000616
ORF1ab/nsp12647S647IaGcaTc77AY.230.000488
ORF1ab/nsp12647S647IaGcaTc77AY.39.10.000277
ORF1ab/nsp12647S647IaGcaTc77AY.60.000288
ORF1ab/nsp12647S647GAgcGgc77B.1.1.2070.008274
ORF1ab/nsp12647S647IaGcaTc77B.1.2210.000497
ORF1ab/nsp12647S647IaGcaTc77B.1.2580.000466
ORF1ab/nsp12647S647IaGcaTc77B.1.4270.000353
ORF1ab/nsp12647S647NaGcaAc77B.1.5960.00061
ORF1ab/nsp12647S647GAgcGgc77B.1.617.20.000026
ORF1ab/nsp12647S647IaGcaTc77P.1.140.000335
ORF1ab/nsp12647S647IaGcaTc66AY.1180.000376
ORF1ab/nsp12647S647IaGcaTc66AY.1200.000223
ORF1ab/nsp12647S647SagCagT66AY.30.00006
ORF1ab/nsp12647S647IaGcaTc66AY.90.000406
ORF1ab/nsp12647S647GAgcGgc66B.10.000055
ORF1ab/nsp12647S647delAGC---66B.1.1.70.000005
ORF1ab/nsp12647S647IaGcaTc66B.1.1600.000187
ORF1ab/nsp12647S647SagCagT66B.1.2430.000418
ORF1ab/nsp12647S647IaGcaTc66B.1.5440.036145
ORF1ab/nsp12647S647IaGcaTc66B.1.6030.06383
ORF1ab/nsp12647S647IaGcaTc55A0.001935
ORF1ab/nsp12647S647IaGcaTc55AY.1110.000916
ORF1ab/nsp12647S647SagCagT55AY.1170.000423
ORF1ab/nsp12647S647IaGcaTc55AY.1190.000177
ORF1ab/nsp12647S647IaGcaTc55AY.270.000324
ORF1ab/nsp12647S647SagCagT55AY.390.000124
ORF1ab/nsp12647S647IaGcaTc55AY.560.008026
ORF1ab/nsp12647S647IaGcaTc55AY.610.000524
ORF1ab/nsp12647S647SagCagT55AZ.30.007599
ORF1ab/nsp12647S647IaGcaTc55B0.000639
ORF1ab/nsp12647S647SagCagT55B.1.1770.000066
ORF1ab/nsp12647S647GAgcGgc55B.1.1770.000066
ORF1ab/nsp12647S647IaGcaTc55B.1.177.120.000758
ORF1ab/nsp12647S647SagCagT55B.1.5260.000118
ORF1ab/nsp12647S647IaGcaTc55B.1.6250.011765
ORF1ab/nsp12647S647IaGcaTc55B.1.6370.000365
ORF1ab/nsp12647S647NaGcaAc55P.10.000079
ORF1ab/nsp12647S647RagCagA44AY.1030.000025
ORF1ab/nsp12647S647IaGcaTc44AY.120.10.001284
ORF1ab/nsp12647S647GAgcGgc44AY.390.000099
ORF1ab/nsp12647S647NaGcaAc44AY.440.000024
ORF1ab/nsp12647S647SagCagT44AY.440.000024
ORF1ab/nsp12647S647SagCagT44AY.46.40.000658
ORF1ab/nsp12647S647IaGcaTc44AY.5.40.001107
ORF1ab/nsp12647S647SagCagT44AY.680.001095
ORF1ab/nsp12647S647IaGcaTc44AY.870.003331
ORF1ab/nsp12647S647IaGcaTc44B.1.1.1760.001757
ORF1ab/nsp12647S647NaGcaAc44B.1.1.2220.000816
ORF1ab/nsp12647S647IaGcaTc44B.1.1.2850.026144
ORF1ab/nsp12647S647IaGcaTc44B.1.1.3050.015444
ORF1ab/nsp12647S647IaGcaTc44B.1.1.3590.111111
ORF1ab/nsp12647S647IaGcaTc44B.1.1.5190.000159
ORF1ab/nsp12647S647IaGcaTc44B.1.2400.000862
ORF1ab/nsp12647S647IaGcaTc44B.1.4160.005076
ORF1ab/nsp12647S647TaGcaCc44B.1.617.10.000516
ORF1ab/nsp12647S647IaGcaTc44C.370.000464
ORF1ab/nsp12647S647SagCagT44P.10.000063
ORF1ab/nsp12647S647IaGcaTc33A.2.50.001497
ORF1ab/nsp12647S647IaGcaTc33A.23.10.002113
ORF1ab/nsp12647S647IaGcaTc33A.290.015957
ORF1ab/nsp12647S647IaGcaTc33AY.1060.001005
ORF1ab/nsp12647S647IaGcaTc33AY.1170.000254
ORF1ab/nsp12647S647IaGcaTc33AY.1210.000406
ORF1ab/nsp12647S647IaGcaTc33AY.160.001139
ORF1ab/nsp12647S647GAgcGgc33AY.260.000085
ORF1ab/nsp12647S647TaGcaCc33AY.40.000005
ORF1ab/nsp12647S647RagCagA33AY.40.000005
ORF1ab/nsp12647S647IaGcaTc33AY.4.50.000322
ORF1ab/nsp12647S647IaGcaTc33AY.400.002893
ORF1ab/nsp12647S647RagCagA33AY.430.000013
ORF1ab/nsp12647S647RagCagA33AY.440.000018
ORF1ab/nsp12647S647GAgcGgc33AY.46.60.000217
ORF1ab/nsp12647S647IaGcaTc33AY.5.30.001012
ORF1ab/nsp12647S647IaGcaTc33AY.550.002752
ORF1ab/nsp12647S647IaGcaTc33AY.70.000588
ORF1ab/nsp12647S647IaGcaTc33AY.75.10.000541
ORF1ab/nsp12647S647IaGcaTc33AY.960.006224
ORF1ab/nsp12647S647SagCagT33B.1.10.000054
ORF1ab/nsp12647S647IaGcaTc33B.1.1.2910.002227
ORF1ab/nsp12647S647SagCagT33B.1.1.3180.000905
ORF1ab/nsp12647S647GAgcGgc33B.1.1.330.001263
ORF1ab/nsp12647S647IaGcaTc33B.1.1.500.002037
ORF1ab/nsp12647S647TaGcaCc33B.1.1.70.000003
ORF1ab/nsp12647S647IaGcaTc33B.1.30.007853
ORF1ab/nsp12647S647IaGcaTc33B.1.36.160.004274
ORF1ab/nsp12647S647IaGcaTc33B.1.4260.003027
ORF1ab/nsp12647S647IaGcaTc33B.1.4780.035294
ORF1ab/nsp12647S647NaGcaAc33B.1.617.20.000011
ORF1ab/nsp12647S647RagCagA33B.1.617.20.000011
ORF1ab/nsp12647S647IaGcaTc33B.1.6210.000266
ORF1ab/nsp12647S647CAgcTgc120.055556
ORF1ab/nsp12647S647CAgCTgT120.055556
ORF1ab/nsp12647S647NaGcaAc120.055556
ORF1ab/nsp12647S647YAGcTAc120.055556
ORF1ab/nsp12647S647YAGCTAT120.055556
ORF1ab/nsp12647S647NaGCaAT120.055556
ORF1ab/nsp12647S647YAGCTAT12All0
ORF1ab/nsp12647S647YAGcTAc12All0
ORF1ab/nsp12647S647IaGcaTc22AY.1000.000092
ORF1ab/nsp12647S647SagCagT22AY.1000.000092
ORF1ab/nsp12647S647GAgcGgc22AY.1020.000053
ORF1ab/nsp12647S647IaGcaTc22AY.1090.001479
ORF1ab/nsp12647S647SagCagT22AY.160.000759
ORF1ab/nsp12647S647IaGcaTc22AY.16.10.00094
ORF1ab/nsp12647S647IaGcaTc22AY.170.016393
ORF1ab/nsp12647S647NaGcaAc22AY.250.000012
ORF1ab/nsp12647S647GAgcGgc22AY.30.00002
ORF1ab/nsp12647S647IaGcaTc22AY.3.10.000171
ORF1ab/nsp12647S647IaGcaTc22AY.4.30.001684
ORF1ab/nsp12647S647SagCagT22AY.460.000208
ORF1ab/nsp12647S647IaGcaTc22AY.46.20.001271
ORF1ab/nsp12647S647RagCagA22AY.50.000041
ORF1ab/nsp12647S647GAgcGgc22AY.610.00021
ORF1ab/nsp12647S647IaGcaTc22AY.740.000231
ORF1ab/nsp12647S647IaGcaTc22AY.750.000112
ORF1ab/nsp12647S647SagCagT22AY.75.10.000361
ORF1ab/nsp12647S647IaGcaTc22AY.9.10.000167
ORF1ab/nsp12647S647SagCagT22AY.9.20.000073
ORF1ab/nsp12647S647IaGcaTc22AY.920.000575
ORF1ab/nsp12647S647NaGcaAc22B.10.000018
ORF1ab/nsp12647S647IaGcaTc22B.1.1.2220.000408
ORF1ab/nsp12647S647IaGcaTc22B.1.1.2610.017241
ORF1ab/nsp12647S647IaGcaTc22B.1.1.3170.000823
ORF1ab/nsp12647S647IaGcaTc22B.1.1.3390.021053
ORF1ab/nsp12647S647IaGcaTc22B.1.1.3690.000892
ORF1ab/nsp12647S647IaGcaTc22B.1.1.370.000386
ORF1ab/nsp12647S647RagCagA12B.1.1.70.000001
ORF1ab/nsp12647S647RagCagG12B.1.1.70.000001
ORF1ab/nsp12647S647IaGcaTc22B.1.130.004751
ORF1ab/nsp12647S647SagCagT22B.1.1600.000062
ORF1ab/nsp12647S647NaGcaAc22B.1.1770.000026
ORF1ab/nsp12647S647IaGcaTc22B.1.177.860.000367
ORF1ab/nsp12647S647RagCagA22B.1.20.000018
ORF1ab/nsp12647S647IaGcaTc22B.1.221.30.001667
ORF1ab/nsp12647S647IaGcaTc22B.1.2360.004107
ORF1ab/nsp12647S647IaGcaTc22B.1.3110.000549
ORF1ab/nsp12647S647SagCagT22B.1.3200.002491
ORF1ab/nsp12647S647SagCagT22B.1.3510.000059
ORF1ab/nsp12647S647NaGcaAc22B.1.3510.000059
ORF1ab/nsp12647S647IaGcaTc22B.1.351.20.000605
ORF1ab/nsp12647S647IaGcaTc22B.1.36.290.001035
ORF1ab/nsp12647S647GAgcGgc22B.1.36.380.003284
ORF1ab/nsp12647S647IaGcaTc22B.1.36.80.002
ORF1ab/nsp12647S647IaGcaTc22B.1.4000.000858
ORF1ab/nsp12647S647IaGcaTc22B.1.4030.006536
ORF1ab/nsp12647S647GAgcGgc22B.1.466.20.000782
ORF1ab/nsp12647S647IaGcaTc22B.1.5170.000854
ORF1ab/nsp12647S647IaGcaTc22B.1.5280.095238
ORF1ab/nsp12647S647IaGcaTc22B.1.5610.000794
ORF1ab/nsp12647S647IaGcaTc22B.1.5710.019417
ORF1ab/nsp12647S647IaGcaTc22B.1.6270.00404
ORF1ab/nsp12647S647IaGcaTc22C.36.30.001134
ORF1ab/nsp12647S647IaGcaTc22N.50.003534
ORF1ab/nsp12647S647IaGcaTc22P.1.150.000465
ORF1ab/nsp12647S647SagCagT22P.1.150.000465
ORF1ab/nsp12647S647IaGcaTc22Q.30.00029
ORF1ab/nsp12647S647GAgcGgc22Q.30.00029
ORF1ab/nsp12647S647SagCagT22Q.40.00091
ORF1ab/nsp12647S647IaGcaTc22R.10.00018
ORF1ab/nsp12647S647SagCagT110.055556
ORF1ab/nsp12647S647KaGCaAG110.055556
ORF1ab/nsp12647S647RagCagG110.055556
ORF1ab/nsp12647S647XAGCTAG110.055556
ORF1ab/nsp12647S647WAgCTgG110.055556
ORF1ab/nsp12647S647SagCagT11A0.000387
ORF1ab/nsp12647S647IaGcaTc11A.20.000662
ORF1ab/nsp12647S647GAgcGgc11A.2.50.000499
ORF1ab/nsp12647S647IaGcaTc11A.40.012821
ORF1ab/nsp12647S647WAgCTgG11All0
ORF1ab/nsp12647S647XAGCTAG11All0
ORF1ab/nsp12647S647EAGCGAA11All0
ORF1ab/nsp12647S647IaGcaTc11AT.10.005128
ORF1ab/nsp12647S647IaGcaTc11AY.100.00053
ORF1ab/nsp12647S647CAgcTgc11AY.1000.000046
ORF1ab/nsp12647S647TaGcaCc11AY.1030.000006
ORF1ab/nsp12647S647IaGcaTc11AY.1050.000643
ORF1ab/nsp12647S647GAgcGgc11AY.1070.000466
ORF1ab/nsp12647S647SagCagT11AY.1100.000113
ORF1ab/nsp12647S647SagCagT11AY.1140.000231
ORF1ab/nsp12647S647RAgcCgc11AY.1170.000085
ORF1ab/nsp12647S647NaGcaAc11AY.1200.000037
ORF1ab/nsp12647S647SagCagT11AY.120.10.000321
ORF1ab/nsp12647S647IaGcaTc11AY.120.2.10.000498
ORF1ab/nsp12647S647GAgcGgc11AY.1210.000135
ORF1ab/nsp12647S647IaGcaTc11AY.130.000161
ORF1ab/nsp12647S647TaGcaCc11AY.230.00007
ORF1ab/nsp12647S647IaGcaTc11AY.240.000431
ORF1ab/nsp12647S647RagCagA11AY.250.000006
ORF1ab/nsp12647S647NaGcaAc11AY.290.000016
ORF1ab/nsp12647S647GAgcGgc11AY.290.000016
ORF1ab/nsp12647S647IaGcaTc11AY.29.10.000221
ORF1ab/nsp12647S647SagCagT11AY.3.10.000085
ORF1ab/nsp12647S647NaGcaAc11AY.330.000067
ORF1ab/nsp12647S647GAgcGgc11AY.330.000067
ORF1ab/nsp12647S647SagCagT11AY.340.000097
ORF1ab/nsp12647S647IaGcaTc11AY.34.10.00051
ORF1ab/nsp12647S647NaGcaAc11AY.360.000148
ORF1ab/nsp12647S647SagCagT11AY.360.000148
ORF1ab/nsp12647S647SagCagT11AY.4.20.000022
ORF1ab/nsp12647S647IaGcaTc11AY.4.2.10.000149
ORF1ab/nsp12647S647IaGcaTc11AY.4.40.000409
ORF1ab/nsp12647S647RagCagA11AY.4.50.000107
ORF1ab/nsp12647S647delAGC---11AY.4.50.000107
ORF1ab/nsp12647S647SagCagT11AY.4.50.000107
ORF1ab/nsp12647S647IaGcaTc11AY.410.000294
ORF1ab/nsp12647S647GAgcGgc11AY.430.000004
ORF1ab/nsp12647S647CAgcTgc11AY.440.000006
ORF1ab/nsp12647S647GAgcGgc11AY.46.10.001027
ORF1ab/nsp12647S647IaGcaTc11AY.46.10.001027
ORF1ab/nsp12647S647IaGcaTc11AY.46.40.000165
ORF1ab/nsp12647S647CAgcTgc11AY.50.000021
ORF1ab/nsp12647S647SagCagT11AY.5.40.000277
ORF1ab/nsp12647S647IaGcaTc11AY.590.00053
ORF1ab/nsp12647S647SagCagT11AY.610.000105
ORF1ab/nsp12647S647IaGcaTc11AY.620.000436
ORF1ab/nsp12647S647IaGcaTc11AY.7.10.000113
ORF1ab/nsp12647S647GAgcGgc11AY.7.10.000113
ORF1ab/nsp12647S647NaGcaAc11AY.700.000209
ORF1ab/nsp12647S647IaGcaTc11AY.820.001357
ORF1ab/nsp12647S647SagCagT11AY.840.000437
ORF1ab/nsp12647S647IaGcaTc11AY.840.000437
ORF1ab/nsp12647S647IaGcaTc11AY.850.000427
ORF1ab/nsp12647S647GAgcGgc11AY.90.000068
ORF1ab/nsp12647S647NaGcaAc11AY.90.000068
ORF1ab/nsp12647S647SagCagT11AY.90.000068
ORF1ab/nsp12647S647TaGcaCc11AY.9.20.000037
ORF1ab/nsp12647S647IaGcaTc11AY.930.000273
ORF1ab/nsp12647S647GAgcGgc11AY.960.002075
ORF1ab/nsp12647S647IaGcaTc11AY.990.001049
ORF1ab/nsp12647S647GAgcGgc11AZ.60.008403
ORF1ab/nsp12647S647KaGCaAA11B.10.000009
ORF1ab/nsp12647S647RagCagA11B.1.10.000018
ORF1ab/nsp12647S647IaGcaTc11B.1.1.1250.010204
ORF1ab/nsp12647S647TaGcaCc11B.1.1.1610.003534
ORF1ab/nsp12647S647IaGcaTc11B.1.1.2040.00304
ORF1ab/nsp12647S647SagCagT11B.1.1.2050.003717
ORF1ab/nsp12647S647TaGcaCc11B.1.1.2140.000055
ORF1ab/nsp12647S647IaGcaTc11B.1.1.2440.015385
ORF1ab/nsp12647S647IaGcaTc11B.1.1.250.000569
ORF1ab/nsp12647S647IaGcaTc11B.1.1.270.00565
ORF1ab/nsp12647S647SagCagT11B.1.1.280.000311
ORF1ab/nsp12647S647NaGcaAc11B.1.1.2840.000107
ORF1ab/nsp12647S647IaGcaTc11B.1.1.2940.001266
ORF1ab/nsp12647S647IaGcaTc11B.1.1.3180.000302
ORF1ab/nsp12647S647IaGcaTc11B.1.1.3260.001761
ORF1ab/nsp12647S647NaGcaAc11B.1.1.3260.001761
ORF1ab/nsp12647S647IaGcaTc11B.1.1.3740.002375
ORF1ab/nsp12647S647IaGcaTc11B.1.1.3800.009804
ORF1ab/nsp12647S647IaGcaTc11B.1.1.3970.002252
ORF1ab/nsp12647S647IaGcaTc11B.1.1.4330.001425
ORF1ab/nsp12647S647IaGcaTc11B.1.1.4480.002033
ORF1ab/nsp12647S647IaGcaTc11B.1.1.4640.001473
ORF1ab/nsp12647S647IaGcaTc11B.1.1.470.005348
ORF1ab/nsp12647S647TaGcaCc11B.1.1.5190.00004
ORF1ab/nsp12647S647SagCagT11B.1.1.5190.00004
ORF1ab/nsp12647S647IaGcaTc11B.1.1.590.006494
ORF1ab/nsp12647S647delAGC---11B.1.1.700.000341
ORF1ab/nsp12647S647IaGcaTc11B.1.1030.019231
ORF1ab/nsp12647S647IaGcaTc11B.1.1260.001276
ORF1ab/nsp12647S647IaGcaTc11B.1.1570.002985
ORF1ab/nsp12647S647SagCagT11B.1.160.160.000929
ORF1ab/nsp12647S647delAGC---11B.1.160.230.004831
ORF1ab/nsp12647S647delAGC---11B.1.1770.000013
ORF1ab/nsp12647S647RagCagA11B.1.1770.000013
ORF1ab/nsp12647S647delAGC---11B.1.177.180.00116
ORF1ab/nsp12647S647IaGcaTc11B.1.177.420.000894
ORF1ab/nsp12647S647IaGcaTc11B.1.177.460.000918
ORF1ab/nsp12647S647SagCagT11B.1.177.520.001757
ORF1ab/nsp12647S647IaGcaTc11B.1.177.650.000665
ORF1ab/nsp12647S647IaGcaTc11B.1.177.730.000566
ORF1ab/nsp12647S647NaGcaAc11B.1.177.730.000566
ORF1ab/nsp12647S647RagCagA11B.1.177.730.000566
ORF1ab/nsp12647S647SagCagT11B.1.177.790.002342
ORF1ab/nsp12647S647IaGcaTc11B.1.177.90.001332
ORF1ab/nsp12647S647TaGcaCc11B.1.20.000009
ORF1ab/nsp12647S647NaGcaAc11B.1.20.000009
ORF1ab/nsp12647S647GAgcGgc11B.1.20.000009
ORF1ab/nsp12647S647SagCagT11B.1.2210.000071
ORF1ab/nsp12647S647IaGcaTc11B.1.221.20.004016
ORF1ab/nsp12647S647IaGcaTc11B.1.2290.009709
ORF1ab/nsp12647S647SagCagT11B.1.2320.000537
ORF1ab/nsp12647S647GAgcGgc11B.1.2340.000132
ORF1ab/nsp12647S647RagCagA11B.1.2400.000216
ORF1ab/nsp12647S647GAgcGgc11B.1.2580.000067
ORF1ab/nsp12647S647IaGcaTc11B.1.258.170.000104
ORF1ab/nsp12647S647IaGcaTc11B.1.2600.003344
ORF1ab/nsp12647S647IaGcaTc11B.1.2650.001271
ORF1ab/nsp12647S647SagCagT11B.1.2790.000514
ORF1ab/nsp12647S647IaGcaTc11B.1.3200.001245
ORF1ab/nsp12647S647TaGcaCc11B.1.3290.000608
ORF1ab/nsp12647S647GAgcGgc11B.1.3510.00003
ORF1ab/nsp12647S647RagCagG11B.1.351.30.000876
ORF1ab/nsp12647S647SagCagT11B.1.360.000146
ORF1ab/nsp12647S647IaGcaTc11B.1.36.180.00042
ORF1ab/nsp12647S647IaGcaTc11B.1.36.190.009259
ORF1ab/nsp12647S647SagCagT11B.1.36.290.000517
ORF1ab/nsp12647S647IaGcaTc11B.1.36.380.001642
ORF1ab/nsp12647S647IaGcaTc11B.1.3620.001541
ORF1ab/nsp12647S647IaGcaTc11B.1.3670.000792
ORF1ab/nsp12647S647SagCagT11B.1.3690.000285
ORF1ab/nsp12647S647SagCagT11B.1.3980.002976
ORF1ab/nsp12647S647IaGcaTc11B.1.400.019608
ORF1ab/nsp12647S647SagCagT11B.1.4040.001302
ORF1ab/nsp12647S647IaGcaTc11B.1.4090.000781
ORF1ab/nsp12647S647SagCagT11B.1.4270.00005
ORF1ab/nsp12647S647IaGcaTc11B.1.4280.00102
ORF1ab/nsp12647S647SagCagT11B.1.4290.000024
ORF1ab/nsp12647S647CAgcTgc11B.1.4290.000024
ORF1ab/nsp12647S647IaGcaTc11B.1.438.10.000107
ORF1ab/nsp12647S647CAgcTgc11B.1.438.10.000107
ORF1ab/nsp12647S647IaGcaTc11B.1.4620.007246
ORF1ab/nsp12647S647IaGcaTc11B.1.466.20.000391
ORF1ab/nsp12647S647SagCagT11B.1.4740.001901
ORF1ab/nsp12647S647IaGcaTc11B.1.4980.020408
ORF1ab/nsp12647S647IaGcaTc11B.1.5240.001406
ORF1ab/nsp12647S647RagCagG11B.1.5250.000113
ORF1ab/nsp12647S647RagCagA11B.1.5260.000024
ORF1ab/nsp12647S647IaGcaTc11B.1.5380.008065
ORF1ab/nsp12647S647SagCagT11B.1.5510.00129
ORF1ab/nsp12647S647NaGcaAc11B.1.5610.000397
ORF1ab/nsp12647S647GAgcGgc11B.1.5680.001111
ORF1ab/nsp12647S647SagCagT11B.1.5750.000303
ORF1ab/nsp12647S647IaGcaTc11B.1.575.10.002439
ORF1ab/nsp12647S647IaGcaTc11B.1.5760.000907
ORF1ab/nsp12647S647IaGcaTc11B.1.5770.000687
ORF1ab/nsp12647S647IaGcaTc11B.1.5910.010638
ORF1ab/nsp12647S647IaGcaTc11B.1.5950.000261
ORF1ab/nsp12647S647TaGcaCc11B.1.6030.010638
ORF1ab/nsp12647S647TaGcaCc11B.1.6090.000479
ORF1ab/nsp12647S647EAGCGAA11B.1.617.20.000004
ORF1ab/nsp12647S647delAGC---11B.1.617.20.000004
ORF1ab/nsp12647S647delAGC---11B.1.6210.000089
ORF1ab/nsp12647S647GAgcGgc11B.1.6210.000089
ORF1ab/nsp12647S647IaGcaTc11B.1.6280.000352
ORF1ab/nsp12647S647IaGcaTc11B.4.10.018868
ORF1ab/nsp12647S647TaGcaCc11B.400.000364
ORF1ab/nsp12647S647IaGcaTc11B.400.000364
ORF1ab/nsp12647S647IaGcaTc11C.140.004329
ORF1ab/nsp12647S647IaGcaTc11C.180.002591
ORF1ab/nsp12647S647IaGcaTc11C.350.000774
ORF1ab/nsp12647S647IaGcaTc11C.400.027778
ORF1ab/nsp12647S647SagCagT11D.20.000075
ORF1ab/nsp12647S647IaGcaTc11K.10.02381
ORF1ab/nsp12647S647NaGcaAc11P.1.120.000484
ORF1ab/nsp12647S647IaGcaTc11P.1.120.000484
ORF1ab/nsp12647S647IaGcaTc11P.1.160.000374
ORF1ab/nsp12647S647GAgcGgc11P.1.170.000162
ORF1ab/nsp12647S647IaGcaTc11P.1.70.000319
ORF1ab/nsp12647S647IaGcaTc11Q.10.000126
ORF1ab/nsp12647S647IaGcaTc11Q.20.000613
ORF1ab/nsp12647S647IaGcaTc11Q.80.000165
ORF1ab/nsp12647S647NaGcaAc11Q.80.000165
ORF1ab/nsp12647S647IaGcaTc11W.30.005263