CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 640 & Codon = cgT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12640R640RR5032RsyncgCcgT123811960.96607415358-15360

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12640R640RcgCcgT11961238All0.000229
ORF1ab/nsp12640R640RcgCcgT427429B.1.1.70.000382
ORF1ab/nsp12640R640RcgCcgT8485B.1.1600.00262
ORF1ab/nsp12640R640RcgCcgT7072B.1.617.20.000264
ORF1ab/nsp12640R640RcgCcgT6264B.1.20.000546
ORF1ab/nsp12640R640RcgCcgT5656AY.30.000557
ORF1ab/nsp12640R640RcgCcgT4546AY.40.00007
ORF1ab/nsp12640R640RcgCcgT3939AY.250.000235
ORF1ab/nsp12640R640RcgCcgT3232AY.430.000142
ORF1ab/nsp12640R640RcgCcgT3131AY.440.000189
ORF1ab/nsp12640R640RcgCcgT2323B.1.10.000417
ORF1ab/nsp12640R640RcgCcgT1919AY.1190.000671
ORF1ab/nsp12640R640RcgCcgT1616P.10.000252
ORF1ab/nsp12640R640RcgCcgT1515B.1.1.2140.000832
ORF1ab/nsp12640R640RcgCcgT1515B.1.1.3300.9375
ORF1ab/nsp12640R640RcgCcgT1014AY.1030.000062
ORF1ab/nsp12640R640RcgCcgT1313AY.610.001362
ORF1ab/nsp12640R640RcgCcgT1112AY.1020.000292
ORF1ab/nsp12640R640RcgCcgT512B.10.000046
ORF1ab/nsp12640R640RcgCcgT1111AY.420.000443
ORF1ab/nsp12640R640RcgCcgT511P.1.140.000239
ORF1ab/nsp12640R640RcgCcgT99B.1.2430.000626
ORF1ab/nsp12640R640RcgCcgT99B.1.258.30.015075
ORF1ab/nsp12640R640RcgCcgT99B.1.3510.000268
ORF1ab/nsp12640R640RcgCcgT88AY.1210.001083
ORF1ab/nsp12640R640RcgCcgT88AY.290.000126
ORF1ab/nsp12640R640RcgCcgT88AY.690.001493
ORF1ab/nsp12640R640RcgCcgT88B.1.1770.000105
ORF1ab/nsp12640R640RcgCcgT88B.1.177.600.001747
ORF1ab/nsp12640R640RcgCcgT77B.1.177.210.000535
ORF1ab/nsp12640R640RcgCcgT66AY.120.2.10.00299
ORF1ab/nsp12640R640RcgCcgT55AY.130.000805
ORF1ab/nsp12640R640RcgCcgT55AY.200.000194
ORF1ab/nsp12640R640RcgCcgT55AY.4.20.000108
ORF1ab/nsp12640R640RcgCcgT55B.1.6210.000443
ORF1ab/nsp12640R640RcgCcgT44AY.50.000083
ORF1ab/nsp12640R640RcgCcgT44B.1.5260.000094
ORF1ab/nsp12640R640RcgCcgT33AY.1170.000254
ORF1ab/nsp12640R640RcgCcgT33AY.140.000264
ORF1ab/nsp12640R640RcgCcgT23AY.260.000057
ORF1ab/nsp12640R640RcgCcgT33AY.330.0002
ORF1ab/nsp12640R640RcgCcgT33AY.470.000093
ORF1ab/nsp12640R640RcgCcgT33AY.930.000819
ORF1ab/nsp12640R640RcgCcgT33B.1.1.2940.003797
ORF1ab/nsp12640R640RcgCcgT33B.1.429.10.036145
ORF1ab/nsp12640R640RcgCcgT33B.1.5880.00273
ORF1ab/nsp12640R640RcgCcgT33B.60.00273
ORF1ab/nsp12640R640RcgCcgT33C.370.000348
ORF1ab/nsp12640R640RcgCcgT22AY.1140.000462
ORF1ab/nsp12640R640RcgCcgT22AY.1200.000074
ORF1ab/nsp12640R640RcgCcgT22AY.230.000139
ORF1ab/nsp12640R640RcgCcgT22AY.390.000049
ORF1ab/nsp12640R640RcgCcgT22AY.39.10.000079
ORF1ab/nsp12640R640RcgCcgT22AY.540.000191
ORF1ab/nsp12640R640RcgCcgT22AY.550.001835
ORF1ab/nsp12640R640RcgCcgT22AY.600.001876
ORF1ab/nsp12640R640RcgCcgT12AY.7.10.000113
ORF1ab/nsp12640R640RcgCcgT22AY.750.000112
ORF1ab/nsp12640R640RcgCcgT22AY.9.20.000073
ORF1ab/nsp12640R640RcgCcgT22AY.99.20.000184
ORF1ab/nsp12640R640RcgCcgT22B.1.5600.009259
ORF1ab/nsp12640R640RcgCcgT22D.20.00015
ORF1ab/nsp12640R640RcgCcgT11A.2.5.20.001572
ORF1ab/nsp12640R640RcgCcgT11A.210.00277
ORF1ab/nsp12640R640RcgCcgT11AY.10.000396
ORF1ab/nsp12640R640RcgCcgT11AY.1130.000142
ORF1ab/nsp12640R640RcgCcgT11AY.1180.000063
ORF1ab/nsp12640R640RcgCcgT11AY.340.000097
ORF1ab/nsp12640R640RcgCcgT11AY.46.40.000165
ORF1ab/nsp12640R640RcgCcgT11AY.46.60.000072
ORF1ab/nsp12640R640RcgCcgT11AY.480.000465
ORF1ab/nsp12640R640RcgCcgT11AY.490.003195
ORF1ab/nsp12640R640RcgCcgT11AY.60.000041
ORF1ab/nsp12640R640RcgCcgT11AY.710.000475
ORF1ab/nsp12640R640RcgCcgT11AY.740.000116
ORF1ab/nsp12640R640RcgCcgT11AY.75.10.00018
ORF1ab/nsp12640R640RcgCcgT11AY.790.001211
ORF1ab/nsp12640R640RcgCcgT11AY.840.000437
ORF1ab/nsp12640R640RcgCcgT11AY.90.000068
ORF1ab/nsp12640R640RcgCcgT11AY.910.00073
ORF1ab/nsp12640R640RcgCcgT11B.1.1.10.000327
ORF1ab/nsp12640R640RcgCcgT11B.1.1.2160.00089
ORF1ab/nsp12640R640RcgCcgT11B.1.1.3010.001179
ORF1ab/nsp12640R640RcgCcgT11B.1.1.330.000421
ORF1ab/nsp12640R640RcgCcgT11B.1.1.370.000193
ORF1ab/nsp12640R640RcgCcgT11B.1.177.450.000381
ORF1ab/nsp12640R640RcgCcgT11B.1.177.810.000189
ORF1ab/nsp12640R640RcgCcgT11B.1.36.160.001425
ORF1ab/nsp12640R640RcgCcgT11B.1.370.014706
ORF1ab/nsp12640R640RcgCcgT11B.1.4080.00369
ORF1ab/nsp12640R640RcgCcgT11B.1.4160.001269
ORF1ab/nsp12640R640RcgCcgT11B.1.4290.000024
ORF1ab/nsp12640R640RcgCcgT11B.1.5250.000113
ORF1ab/nsp12640R640RcgCcgT11B.1.6090.000479
ORF1ab/nsp12640R640RcgCcgT11B.1.6160.02439
ORF1ab/nsp12640R640RcgCcgT11B.1.617.10.000129
ORF1ab/nsp12640R640RcgCcgT11B.1.6180.004032
ORF1ab/nsp12640R640RcgCcgT11B.1.6200.000946
ORF1ab/nsp12640R640RcgCcgT11B.1.9.50.005682
ORF1ab/nsp12640R640RcgCcgT11B.550.00295
ORF1ab/nsp12640R640RcgCcgT11Q.80.000165
ORF1ab/nsp12640R640RcgCcgT11R.10.00009