CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 640 & Codon = cCc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12640R640PR5032PnonsyncGccCc1212115358-15360

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12640R640PcGccCc1212All0.000002
ORF1ab/nsp12640R640PcGccCc33B.10.000027
ORF1ab/nsp12640R640PcGccCc33B.1.617.20.000011
ORF1ab/nsp12640R640PcGccCc22B.1.1.70.000002
ORF1ab/nsp12640R640PcGccCc22B.1.3510.000059
ORF1ab/nsp12640R640PcGccCc110.055556
ORF1ab/nsp12640R640PcGccCc11B.1.6000.005848