CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 640 & Codon = Tgc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12640R640CR5032CnonsynCgcTgc4848115358-15360

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12640R640CCgcTgc4848All0.000009
ORF1ab/nsp12640R640CCgcTgc1515B.1.1.70.000013
ORF1ab/nsp12640R640CCgcTgc44AY.40.000006
ORF1ab/nsp12640R640CCgcTgc33AY.46.60.000217
ORF1ab/nsp12640R640CCgcTgc33B.1.10.000054
ORF1ab/nsp12640R640CCgcTgc33D.20.000225
ORF1ab/nsp12640R640CCgcTgc22AY.1030.000012
ORF1ab/nsp12640R640CCgcTgc22AY.440.000012
ORF1ab/nsp12640R640CCgcTgc22B.10.000018
ORF1ab/nsp12640R640CCgcTgc11A.10.000282
ORF1ab/nsp12640R640CCgcTgc11AY.250.000006
ORF1ab/nsp12640R640CCgcTgc11AY.260.000028
ORF1ab/nsp12640R640CCgcTgc11AY.290.000016
ORF1ab/nsp12640R640CCgcTgc11AY.4.20.000022
ORF1ab/nsp12640R640CCgcTgc11AY.50.000021
ORF1ab/nsp12640R640CCgcTgc11B.1.1.1230.017857
ORF1ab/nsp12640R640CCgcTgc11B.1.1.3330.001076
ORF1ab/nsp12640R640CCgcTgc11B.1.20.000009
ORF1ab/nsp12640R640CCgcTgc11B.1.3110.000275
ORF1ab/nsp12640R640CCgcTgc11B.1.36.390.002217
ORF1ab/nsp12640R640CCgcTgc11B.1.4290.000024
ORF1ab/nsp12640R640CCgcTgc11B.1.5950.000261
ORF1ab/nsp12640R640CCgcTgc11B.1.5960.000087