CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 613 & Codon = caT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12613H613HH5005HsyncaCcaT11426831142683115277-15279

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12613H613HcaCcaT11426831142683All0.218552
ORF1ab/nsp12613H613HcaCcaT11107521110752B.1.1.70.994371
ORF1ab/nsp12613H613HcaCcaT78887888Q.10.996463
ORF1ab/nsp12613H613HcaCcaT68606860Q.30.994924
ORF1ab/nsp12613H613HcaCcaT45984598Q.80.758245
ORF1ab/nsp12613H613HcaCcaT29612961B.1.10.053715
ORF1ab/nsp12613H613HcaCcaT21842184Q.40.993179
ORF1ab/nsp12613H613HcaCcaT16291629Q.20.999387
ORF1ab/nsp12613H613HcaCcaT14541454B.10.013318
ORF1ab/nsp12613H613HcaCcaT898898Q.70.997778
ORF1ab/nsp12613H613HcaCcaT500500AY.40.000778
ORF1ab/nsp12613H613HcaCcaT214214B.1.177.730.121178
ORF1ab/nsp12613H613HcaCcaT151151Q.61
ORF1ab/nsp12613H613HcaCcaT115115AY.290.001814
ORF1ab/nsp12613H613HcaCcaT104104B.1.617.20.000392
ORF1ab/nsp12613H613HcaCcaT9494B.1.1770.001238
ORF1ab/nsp12613H613HcaCcaT8585AY.30.000845
ORF1ab/nsp12613H613HcaCcaT8383B.1.3750.068033
ORF1ab/nsp12613H613HcaCcaT7979P.10.001245
ORF1ab/nsp12613H613HcaCcaT7878B.1.6370.0057
ORF1ab/nsp12613H613HcaCcaT7676B.1.20.000669
ORF1ab/nsp12613H613HcaCcaT7676B.1.360.011088
ORF1ab/nsp12613H613HcaCcaT7070AY.440.000426
ORF1ab/nsp12613H613HcaCcaT6767B.1.1.3110.023997
ORF1ab/nsp12613H613HcaCcaT6464AY.430.000284
ORF1ab/nsp12613H613HcaCcaT5959Q.51
ORF1ab/nsp12613H613HcaCcaT5858B.1.5260.001363
ORF1ab/nsp12613H613HcaCcaT5353B.1.5760.048051
ORF1ab/nsp12613H613HcaCcaT4646B0.005879
ORF1ab/nsp12613H613HcaCcaT4141B.1.1.4090.116147
ORF1ab/nsp12613H613HcaCcaT3939B.1.177.70.006429
ORF1ab/nsp12613H613HcaCcaT3838B.1.1.2220.007752
ORF1ab/nsp12613H613HcaCcaT3838B.1.5960.003311
ORF1ab/nsp12613H613HcaCcaT3636AY.250.000217
ORF1ab/nsp12613H613HcaCcaT3636AY.260.001019
ORF1ab/nsp12613H613HcaCcaT3333B.1.4290.000776
ORF1ab/nsp12613H613HcaCcaT3131B.1.2210.002202
ORF1ab/nsp12613H613HcaCcaT3030B.1.2580.001996
ORF1ab/nsp12613H613HcaCcaT3030B.1.3510.000892
ORF1ab/nsp12613H613HcaCcaT2929AY.740.003354
ORF1ab/nsp12613H613HcaCcaT2626B.1.1.5190.001032
ORF1ab/nsp12613H613HcaCcaT2424B.1.177.430.035451
ORF1ab/nsp12613H613HcaCcaT2323AY.1020.00061
ORF1ab/nsp12613H613HcaCcaT2222AY.1030.000137
ORF1ab/nsp12613H613HcaCcaT2222B.1.1.5070.191304
ORF1ab/nsp12613H613HcaCcaT2222B.1.4270.001111
ORF1ab/nsp12613H613HcaCcaT2121B.1.177.860.003853
ORF1ab/nsp12613H613HcaCcaT2121P.1.10.006671
ORF1ab/nsp12613H613HcaCcaT2020AY.390.000494
ORF1ab/nsp12613H613HcaCcaT1818AY.860.014938
ORF1ab/nsp12613H613HcaCcaT1818B.1.1.1610.063604
ORF1ab/nsp12613H613HcaCcaT1818P.1.160.006734
ORF1ab/nsp12613H613HcaCcaT1717AY.470.000529
ORF1ab/nsp12613H613HcaCcaT1616AY.46.60.001155
ORF1ab/nsp12613H613HcaCcaT1616P.20.002986
ORF1ab/nsp12613H613HcaCcaT1515AY.200.000583
ORF1ab/nsp12613H613HcaCcaT1515B.1.1.2200.027881
ORF1ab/nsp12613H613HcaCcaT1414B.1.1600.000437
ORF1ab/nsp12613H613HcaCcaT1414C.370.001625
ORF1ab/nsp12613H613HcaCcaT1313B.1.258.170.001352
ORF1ab/nsp12613H613HcaCcaT1212B.1.6090.005753
ORF1ab/nsp12613H613HcaCcaT11110.611111
ORF1ab/nsp12613H613HcaCcaT1111B.1.3770.050228
ORF1ab/nsp12613H613HcaCcaT1111B.1.5950.002871
ORF1ab/nsp12613H613HcaCcaT1010AY.1140.002311
ORF1ab/nsp12613H613HcaCcaT99B.1.617.10.001161
ORF1ab/nsp12613H613HcaCcaT99C.36.30.005105
ORF1ab/nsp12613H613HcaCcaT99P.1.150.002091
ORF1ab/nsp12613H613HcaCcaT88AY.39.10.000317
ORF1ab/nsp12613H613HcaCcaT88B.1.1.4320.010127
ORF1ab/nsp12613H613HcaCcaT88B.1.1.5280.038462
ORF1ab/nsp12613H613HcaCcaT88B.1.3110.002197
ORF1ab/nsp12613H613HcaCcaT88P.1.120.003872
ORF1ab/nsp12613H613HcaCcaT88R.10.00072
ORF1ab/nsp12613H613HcaCcaT77AY.1000.000322
ORF1ab/nsp12613H613HcaCcaT77AY.1090.005178
ORF1ab/nsp12613H613HcaCcaT77AY.300.00277
ORF1ab/nsp12613H613HcaCcaT77AY.420.000282
ORF1ab/nsp12613H613HcaCcaT77AY.750.000392
ORF1ab/nsp12613H613HcaCcaT77B.1.1.3120.013384
ORF1ab/nsp12613H613HcaCcaT77B.1.1.580.037634
ORF1ab/nsp12613H613HcaCcaT77B.1.177.810.001325
ORF1ab/nsp12613H613HcaCcaT77B.1.4110.025926
ORF1ab/nsp12613H613HcaCcaT77B.1.6230.003755
ORF1ab/nsp12613H613HcaCcaT77P.1.170.001132
ORF1ab/nsp12613H613HcaCcaT66A.2.50.002994
ORF1ab/nsp12613H613HcaCcaT66B.1.1390.004399
ORF1ab/nsp12613H613HcaCcaT66B.1.2400.001293
ORF1ab/nsp12613H613HcaCcaT66B.1.2410.00487
ORF1ab/nsp12613H613HcaCcaT55A.300.714286
ORF1ab/nsp12613H613HcaCcaT55AY.920.001436
ORF1ab/nsp12613H613HcaCcaT55AY.980.000395
ORF1ab/nsp12613H613HcaCcaT55B.1.1.280.001556
ORF1ab/nsp12613H613HcaCcaT55B.1.1.390.002548
ORF1ab/nsp12613H613HcaCcaT55B.1.2060.004078
ORF1ab/nsp12613H613HcaCcaT55B.1.214.20.002998
ORF1ab/nsp12613H613HcaCcaT55B.1.5250.000566
ORF1ab/nsp12613H613HcaCcaT55C.180.012953
ORF1ab/nsp12613H613HcaCcaT44A0.001548
ORF1ab/nsp12613H613HcaCcaT44AY.1210.000541
ORF1ab/nsp12613H613HcaCcaT44AY.330.000267
ORF1ab/nsp12613H613HcaCcaT44AY.520.003257
ORF1ab/nsp12613H613HcaCcaT44AY.610.000419
ORF1ab/nsp12613H613HcaCcaT44B.1.1.100.004459
ORF1ab/nsp12613H613HcaCcaT44B.1.1.2940.005063
ORF1ab/nsp12613H613HcaCcaT44B.1.1.5230.00625
ORF1ab/nsp12613H613HcaCcaT44B.1.1.700.001364
ORF1ab/nsp12613H613HcaCcaT44B.1.1570.01194
ORF1ab/nsp12613H613HcaCcaT44B.1.177.170.003284
ORF1ab/nsp12613H613HcaCcaT44B.1.177.310.045977
ORF1ab/nsp12613H613HcaCcaT44B.1.177.320.005398
ORF1ab/nsp12613H613HcaCcaT44B.1.2140.014652
ORF1ab/nsp12613H613HcaCcaT44B.1.36.80.004
ORF1ab/nsp12613H613HcaCcaT44B.1.5640.001704
ORF1ab/nsp12613H613HcaCcaT44B.1.5750.001214
ORF1ab/nsp12613H613HcaCcaT44C.160.004242
ORF1ab/nsp12613H613HcaCcaT44P.1.100.001078
ORF1ab/nsp12613H613HcaCcaT33AH.30.011407
ORF1ab/nsp12613H613HcaCcaT33AY.1190.000106
ORF1ab/nsp12613H613HcaCcaT33AY.270.000194
ORF1ab/nsp12613H613HcaCcaT33AY.360.000445
ORF1ab/nsp12613H613HcaCcaT33AY.450.000365
ORF1ab/nsp12613H613HcaCcaT33AY.50.000062
ORF1ab/nsp12613H613HcaCcaT33AY.680.000821
ORF1ab/nsp12613H613HcaCcaT33AY.9.10.000251
ORF1ab/nsp12613H613HcaCcaT33B.1.1.2050.011152
ORF1ab/nsp12613H613HcaCcaT33B.1.1.3560.025641
ORF1ab/nsp12613H613HcaCcaT33B.1.1.3720.002066
ORF1ab/nsp12613H613HcaCcaT33B.1.177.120.000455
ORF1ab/nsp12613H613HcaCcaT33B.1.177.410.0075
ORF1ab/nsp12613H613HcaCcaT33B.1.2370.014925
ORF1ab/nsp12613H613HcaCcaT33B.1.2430.000209
ORF1ab/nsp12613H613HcaCcaT33B.1.3490.002144
ORF1ab/nsp12613H613HcaCcaT33B.1.3670.002377
ORF1ab/nsp12613H613HcaCcaT33B.1.3960.002117
ORF1ab/nsp12613H613HcaCcaT33B.1.4620.021739
ORF1ab/nsp12613H613HcaCcaT33B.1.5800.012195
ORF1ab/nsp12613H613HcaCcaT33B.1.5900.013636
ORF1ab/nsp12613H613HcaCcaT33B.1.6210.000266
ORF1ab/nsp12613H613HcaCcaT33P.1.70.000958
ORF1ab/nsp12613H613HcaCcaT22AD.20.000438
ORF1ab/nsp12613H613HcaCcaT22AY.1080.002205
ORF1ab/nsp12613H613HcaCcaT22AY.1130.000285
ORF1ab/nsp12613H613HcaCcaT22AY.1180.000125
ORF1ab/nsp12613H613HcaCcaT22AY.140.000176
ORF1ab/nsp12613H613HcaCcaT22AY.160.000759
ORF1ab/nsp12613H613HcaCcaT22AY.23.10.000835
ORF1ab/nsp12613H613HcaCcaT22AY.350.000466
ORF1ab/nsp12613H613HcaCcaT22AY.4.20.000043
ORF1ab/nsp12613H613HcaCcaT22AY.46.40.000329
ORF1ab/nsp12613H613HcaCcaT22AY.530.000575
ORF1ab/nsp12613H613HcaCcaT22AY.590.001059
ORF1ab/nsp12613H613HcaCcaT22AY.660.002139
ORF1ab/nsp12613H613HcaCcaT22AY.670.000929
ORF1ab/nsp12613H613HcaCcaT22AY.75.10.000361
ORF1ab/nsp12613H613HcaCcaT22AY.840.000875
ORF1ab/nsp12613H613HcaCcaT22AY.850.000854
ORF1ab/nsp12613H613HcaCcaT22AY.880.001768
ORF1ab/nsp12613H613HcaCcaT22AY.9.20.000073
ORF1ab/nsp12613H613HcaCcaT22AY.930.000546
ORF1ab/nsp12613H613HcaCcaT22AZ.20.001642
ORF1ab/nsp12613H613HcaCcaT22B.1.1.1710.007353
ORF1ab/nsp12613H613HcaCcaT22B.1.1.2090.017857
ORF1ab/nsp12613H613HcaCcaT22B.1.1.3060.000877
ORF1ab/nsp12613H613HcaCcaT22B.1.1.3170.000823
ORF1ab/nsp12613H613HcaCcaT22B.1.1.3180.000604
ORF1ab/nsp12613H613HcaCcaT22B.1.1.3260.003521
ORF1ab/nsp12613H613HcaCcaT22B.1.1.3700.025316
ORF1ab/nsp12613H613HcaCcaT22B.1.1.3740.004751
ORF1ab/nsp12613H613HcaCcaT22B.1.1.4170.005405
ORF1ab/nsp12613H613HcaCcaT22B.1.1.5240.041667
ORF1ab/nsp12613H613HcaCcaT22B.1.1.5250.010929
ORF1ab/nsp12613H613HcaCcaT22B.1.160.160.001859
ORF1ab/nsp12613H613HcaCcaT22B.1.177.330.003289
ORF1ab/nsp12613H613HcaCcaT22B.1.177.500.00939
ORF1ab/nsp12613H613HcaCcaT22B.1.177.630.005405
ORF1ab/nsp12613H613HcaCcaT22B.1.214.30.014286
ORF1ab/nsp12613H613HcaCcaT22B.1.258.140.001961
ORF1ab/nsp12613H613HcaCcaT22B.1.351.50.001199
ORF1ab/nsp12613H613HcaCcaT22B.1.3620.003082
ORF1ab/nsp12613H613HcaCcaT22B.1.5170.000854
ORF1ab/nsp12613H613HcaCcaT22B.1.5240.002813
ORF1ab/nsp12613H613HcaCcaT22B.1.5300.014286
ORF1ab/nsp12613H613HcaCcaT22B.1.5330.019231
ORF1ab/nsp12613H613HcaCcaT22B.1.5610.000794
ORF1ab/nsp12613H613HcaCcaT22B.1.5990.007299
ORF1ab/nsp12613H613HcaCcaT22B.1.617.30.00597
ORF1ab/nsp12613H613HcaCcaT22B.1.6200.001892
ORF1ab/nsp12613H613HcaCcaT22B.1.621.10.001012
ORF1ab/nsp12613H613HcaCcaT22B.1.6250.004706
ORF1ab/nsp12613H613HcaCcaT22B.1.6280.000705
ORF1ab/nsp12613H613HcaCcaT22B.1.6330.083333
ORF1ab/nsp12613H613HcaCcaT22P.1.130.001797
ORF1ab/nsp12613H613HcaCcaT11A.2.40.003367
ORF1ab/nsp12613H613HcaCcaT11A.270.001656
ORF1ab/nsp12613H613HcaCcaT11A.30.002096
ORF1ab/nsp12613H613HcaCcaT11A.70.055556
ORF1ab/nsp12613H613HcaCcaT11AY.1010.00049
ORF1ab/nsp12613H613HcaCcaT11AY.1100.000113
ORF1ab/nsp12613H613HcaCcaT11AY.1160.000287
ORF1ab/nsp12613H613HcaCcaT11AY.1170.000085
ORF1ab/nsp12613H613HcaCcaT11AY.1200.000037
ORF1ab/nsp12613H613HcaCcaT11AY.130.000161
ORF1ab/nsp12613H613HcaCcaT11AY.20.000356
ORF1ab/nsp12613H613HcaCcaT11AY.230.00007
ORF1ab/nsp12613H613HcaCcaT11AY.29.10.000221
ORF1ab/nsp12613H613HcaCcaT11AY.39.20.001541
ORF1ab/nsp12613H613HcaCcaT11AY.4.2.10.000149
ORF1ab/nsp12613H613HcaCcaT11AY.4.30.000842
ORF1ab/nsp12613H613HcaCcaT11AY.4.50.000107
ORF1ab/nsp12613H613HcaCcaT11AY.460.000104
ORF1ab/nsp12613H613HcaCcaT11AY.46.10.001027
ORF1ab/nsp12613H613HcaCcaT11AY.5.40.000277
ORF1ab/nsp12613H613HcaCcaT11AY.500.000799
ORF1ab/nsp12613H613HcaCcaT11AY.60.000041
ORF1ab/nsp12613H613HcaCcaT11AY.630.000387
ORF1ab/nsp12613H613HcaCcaT11AY.690.000187
ORF1ab/nsp12613H613HcaCcaT11AY.7.10.000113
ORF1ab/nsp12613H613HcaCcaT11AY.780.001541
ORF1ab/nsp12613H613HcaCcaT11AY.820.001357
ORF1ab/nsp12613H613HcaCcaT11AY.90.000068
ORF1ab/nsp12613H613HcaCcaT11AY.98.10.000048
ORF1ab/nsp12613H613HcaCcaT11B.1.1.10.000327
ORF1ab/nsp12613H613HcaCcaT11B.1.1.1700.001247
ORF1ab/nsp12613H613HcaCcaT11B.1.1.1890.001513
ORF1ab/nsp12613H613HcaCcaT11B.1.1.1980.001468
ORF1ab/nsp12613H613HcaCcaT11B.1.1.2310.003096
ORF1ab/nsp12613H613HcaCcaT11B.1.1.2360.006897
ORF1ab/nsp12613H613HcaCcaT11B.1.1.250.000569
ORF1ab/nsp12613H613HcaCcaT11B.1.1.2540.011236
ORF1ab/nsp12613H613HcaCcaT11B.1.1.2650.003155
ORF1ab/nsp12613H613HcaCcaT11B.1.1.2690.001353
ORF1ab/nsp12613H613HcaCcaT11B.1.1.2770.000759
ORF1ab/nsp12613H613HcaCcaT11B.1.1.2910.000742
ORF1ab/nsp12613H613HcaCcaT11B.1.1.3010.001179
ORF1ab/nsp12613H613HcaCcaT11B.1.1.3280.016949
ORF1ab/nsp12613H613HcaCcaT11B.1.1.330.000421
ORF1ab/nsp12613H613HcaCcaT11B.1.1.3480.000796
ORF1ab/nsp12613H613HcaCcaT11B.1.1.3970.002252
ORF1ab/nsp12613H613HcaCcaT11B.1.1.4370.010417
ORF1ab/nsp12613H613HcaCcaT11B.1.1.4620.008621
ORF1ab/nsp12613H613HcaCcaT11B.1.1.4640.001473
ORF1ab/nsp12613H613HcaCcaT11B.1.1.5260.003546
ORF1ab/nsp12613H613HcaCcaT11B.1.1.990.02381
ORF1ab/nsp12613H613HcaCcaT11B.1.160.310.008065
ORF1ab/nsp12613H613HcaCcaT11B.1.160.70.002079
ORF1ab/nsp12613H613HcaCcaT11B.1.1700.00431
ORF1ab/nsp12613H613HcaCcaT11B.1.177.150.000631
ORF1ab/nsp12613H613HcaCcaT11B.1.177.160.000664
ORF1ab/nsp12613H613HcaCcaT11B.1.177.210.000076
ORF1ab/nsp12613H613HcaCcaT11B.1.177.40.000211
ORF1ab/nsp12613H613HcaCcaT11B.1.177.440.000519
ORF1ab/nsp12613H613HcaCcaT11B.1.177.510.004566
ORF1ab/nsp12613H613HcaCcaT11B.1.177.560.000668
ORF1ab/nsp12613H613HcaCcaT11B.1.177.60.000977
ORF1ab/nsp12613H613HcaCcaT11B.1.177.600.000218
ORF1ab/nsp12613H613HcaCcaT11B.1.2340.000132
ORF1ab/nsp12613H613HcaCcaT11B.1.2390.001221
ORF1ab/nsp12613H613HcaCcaT11B.1.258.110.000396
ORF1ab/nsp12613H613HcaCcaT11B.1.2600.003344
ORF1ab/nsp12613H613HcaCcaT11B.1.3010.005917
ORF1ab/nsp12613H613HcaCcaT11B.1.3200.001245
ORF1ab/nsp12613H613HcaCcaT11B.1.3240.001605
ORF1ab/nsp12613H613HcaCcaT11B.1.3360.002439
ORF1ab/nsp12613H613HcaCcaT11B.1.351.30.000876
ORF1ab/nsp12613H613HcaCcaT11B.1.36.10.00114
ORF1ab/nsp12613H613HcaCcaT11B.1.36.100.004785
ORF1ab/nsp12613H613HcaCcaT11B.1.36.170.000494
ORF1ab/nsp12613H613HcaCcaT11B.1.36.240.006173
ORF1ab/nsp12613H613HcaCcaT11B.1.3690.000285
ORF1ab/nsp12613H613HcaCcaT11B.1.3800.006623
ORF1ab/nsp12613H613HcaCcaT11B.1.3930.028571
ORF1ab/nsp12613H613HcaCcaT11B.1.3970.004854
ORF1ab/nsp12613H613HcaCcaT11B.1.4000.000429
ORF1ab/nsp12613H613HcaCcaT11B.1.4160.001269
ORF1ab/nsp12613H613HcaCcaT11B.1.4170.028571
ORF1ab/nsp12613H613HcaCcaT11B.1.4320.011236
ORF1ab/nsp12613H613HcaCcaT11B.1.438.10.000107
ORF1ab/nsp12613H613HcaCcaT11B.1.4560.003268
ORF1ab/nsp12613H613HcaCcaT11B.1.466.20.000391
ORF1ab/nsp12613H613HcaCcaT11B.1.4680.005714
ORF1ab/nsp12613H613HcaCcaT11B.1.4700.001404
ORF1ab/nsp12613H613HcaCcaT11B.1.4730.019231
ORF1ab/nsp12613H613HcaCcaT11B.1.5100.026316
ORF1ab/nsp12613H613HcaCcaT11B.1.5380.008065
ORF1ab/nsp12613H613HcaCcaT11B.1.5770.000687
ORF1ab/nsp12613H613HcaCcaT11B.1.5820.000491
ORF1ab/nsp12613H613HcaCcaT11B.1.6060.006024
ORF1ab/nsp12613H613HcaCcaT11B.1.6270.00202
ORF1ab/nsp12613H613HcaCcaT11B.1.6340.003425
ORF1ab/nsp12613H613HcaCcaT11B.1.6360.006711
ORF1ab/nsp12613H613HcaCcaT11B.1.940.027027
ORF1ab/nsp12613H613HcaCcaT11B.350.007812
ORF1ab/nsp12613H613HcaCcaT11B.60.00091
ORF1ab/nsp12613H613HcaCcaT11B.6.60.000889
ORF1ab/nsp12613H613HcaCcaT11P.1.10.10.00813
ORF1ab/nsp12613H613HcaCcaT11P.1.140.000048