CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 607 & Codon = agC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12607S607SS4999SsynagTagC236236115259-15261

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12607S607SagTagC236236All0.000045
ORF1ab/nsp12607S607SagTagC5858AY.20.020655
ORF1ab/nsp12607S607SagTagC3232AY.40.00005
ORF1ab/nsp12607S607SagTagC3131AY.440.000189
ORF1ab/nsp12607S607SagTagC2626B.1.617.20.000098
ORF1ab/nsp12607S607SagTagC1212AY.1020.000318
ORF1ab/nsp12607S607SagTagC1111AY.960.022822
ORF1ab/nsp12607S607SagTagC1010AY.1030.000062
ORF1ab/nsp12607S607SagTagC66AY.250.000036
ORF1ab/nsp12607S607SagTagC44AY.240.001724
ORF1ab/nsp12607S607SagTagC44B.10.000037
ORF1ab/nsp12607S607SagTagC44B.1.1.70.000004
ORF1ab/nsp12607S607SagTagC33AY.10.001187
ORF1ab/nsp12607S607SagTagC33B.1.4990.003151
ORF1ab/nsp12607S607SagTagC33P.10.000047
ORF1ab/nsp12607S607SagTagC22AY.460.000208
ORF1ab/nsp12607S607SagTagC22B.1.1.4480.004065
ORF1ab/nsp12607S607SagTagC22B.1.1770.000026
ORF1ab/nsp12607S607SagTagC22B.1.4290.000047
ORF1ab/nsp12607S607SagTagC22P.1.140.000096
ORF1ab/nsp12607S607SagTagC11A.2.50.000499
ORF1ab/nsp12607S607SagTagC11AY.1080.001103
ORF1ab/nsp12607S607SagTagC11AY.1200.000037
ORF1ab/nsp12607S607SagTagC11AY.200.000039
ORF1ab/nsp12607S607SagTagC11AY.3.10.000085
ORF1ab/nsp12607S607SagTagC11AY.390.000025
ORF1ab/nsp12607S607SagTagC11AY.430.000004
ORF1ab/nsp12607S607SagTagC11AY.620.000436
ORF1ab/nsp12607S607SagTagC11AY.680.000274
ORF1ab/nsp12607S607SagTagC11AY.730.000665
ORF1ab/nsp12607S607SagTagC11AY.98.10.000048
ORF1ab/nsp12607S607SagTagC11B0.000128
ORF1ab/nsp12607S607SagTagC11B.1.1600.000031
ORF1ab/nsp12607S607SagTagC11B.1.20.000009
ORF1ab/nsp12607S607SagTagC11B.1.258.180.1
ORF1ab/nsp12607S607SagTagC11B.1.351.50.0006
ORF1ab/nsp12607S607SagTagC11B.1.3960.000706
ORF1ab/nsp12607S607SagTagC11B.1.466.20.000391
ORF1ab/nsp12607S607SagTagC11C.20.016129