CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 6

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp126S6LS4398LnonsyntCgtTg11807117930.99881413457-13459
ORF1ab/nsp126S6LS4398LnonsyntCGtTA11807140.0011857413457-13459
ORF1ab/nsp126S6SS4398SsyntcGtcT596839760.6662213457-13459
ORF1ab/nsp126S6SS4398SsyntcGtcA596818360.30764113457-13459
ORF1ab/nsp126S6SS4398SsyntcGtcC59681560.026139413457-13459
ORF1ab/nsp126S6PS4398PnonsynTcgCcg147147113457-13459
ORF1ab/nsp126S6delS4398deldelTCG---8787113457-13459
ORF1ab/nsp126S6AS4398AnonsynTcgGcg6767113457-13459
ORF1ab/nsp126S6TS4398TnonsynTcgAcg42380.90476213457-13459
ORF1ab/nsp126S6TS4398TnonsynTcGAcC4220.04761913457-13459
ORF1ab/nsp126S6TS4398TnonsynTcGAcA4210.023809513457-13459
ORF1ab/nsp126S6TS4398TnonsynTcGAcT4210.023809513457-13459
ORF1ab/nsp126S6del1S4398del1deltcGtc-13100.76923113457-13459
ORF1ab/nsp126S6del1S4398del1delTcg-cg1310.076923113457-13459
ORF1ab/nsp126S6del1S4398del1deltCGtT-1310.076923113457-13459
ORF1ab/nsp126S6del1S4398del1deltCGt-N1310.076923113457-13459
ORF1ab/nsp126S6XS4398XnonsyntCgtAg980.88888913457-13459
ORF1ab/nsp126S6XS4398XnonsyntCGtGA910.11111113457-13459
ORF1ab/nsp126S6FS4398FnonsyntCGtTT55113457-13459
ORF1ab/nsp126S6WS4398WnonsyntCgtGg33113457-13459
ORF1ab/nsp126S6del2S4398del2deltCGt--22113457-13459
ORF1ab/nsp126S6RS4398RnonsynTCGCGC210.513457-13459
ORF1ab/nsp126S6RS4398RnonsynTCGAGA210.513457-13459
ORF1ab/nsp126S6MS4398MnonsynTCgATg11113457-13459
ORF1ab/nsp126S6IS4398InonsynTCGATT11113457-13459
ORF1ab/nsp126S6CS4398CnonsyntCGtGC11113457-13459
ORF1ab/nsp126S6KS4398KnonsynTCGAAA11113457-13459

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp126S6LtCgtTg1179311807All0.002256
ORF1ab/nsp126S6LtCGtTA1411807All0.000003
ORF1ab/nsp126S6StcGtcT39765968All0.00076
ORF1ab/nsp126S6StcGtcA18365968All0.000351
ORF1ab/nsp126S6StcGtcC1565968All0.00003
ORF1ab/nsp126S6LtCgtTg23012301AY.40.003581
ORF1ab/nsp126S6LtCgtTg16571657B.1.6230.888948
ORF1ab/nsp126S6LtCgtTg13211321B.1.1.70.001183
ORF1ab/nsp126S6LtCgtTg825829B.1.617.20.003106
ORF1ab/nsp126S6LtCGtTA4829B.1.617.20.000015
ORF1ab/nsp126S6StcGtcT577772B.1.1.70.000517
ORF1ab/nsp126S6StcGtcA193772B.1.1.70.000173
ORF1ab/nsp126S6StcGtcC2772B.1.1.70.000002
ORF1ab/nsp126S6LtCgtTg762762B.1.258.170.079226
ORF1ab/nsp126S6StcGtcT448736AY.40.000697
ORF1ab/nsp126S6StcGtcA285736AY.40.000444
ORF1ab/nsp126S6StcGtcC3736AY.40.000005
ORF1ab/nsp126S6StcGtcT394581B.1.617.20.001484
ORF1ab/nsp126S6StcGtcA181581B.1.617.20.000682
ORF1ab/nsp126S6StcGtcC6581B.1.617.20.000023
ORF1ab/nsp126S6LtCgtTg476476AY.250.002863
ORF1ab/nsp126S6LtCgtTg441441AY.430.001954
ORF1ab/nsp126S6LtCgtTg396396B.1.2400.085363
ORF1ab/nsp126S6StcGtcT352352B.1.177.650.234198
ORF1ab/nsp126S6StcGtcA200212AY.1020.005303
ORF1ab/nsp126S6StcGtcT12212AY.1020.000318
ORF1ab/nsp126S6LtCgtTg203203B.1.20.001787
ORF1ab/nsp126S6StcGtcT180201AY.430.000797
ORF1ab/nsp126S6StcGtcA15201AY.430.000066
ORF1ab/nsp126S6StcGtcC6201AY.430.000027
ORF1ab/nsp126S6LtCgtTg198198AY.30.001969
ORF1ab/nsp126S6StcGtcA195195AY.1090.144231
ORF1ab/nsp126S6StcGtcT178179AY.50.003676
ORF1ab/nsp126S6StcGtcA1179AY.50.000021
ORF1ab/nsp126S6LtCgtTg167167AY.1160.047892
ORF1ab/nsp126S6LtCgtTg161161AY.440.00098
ORF1ab/nsp126S6LtCgtTg160161B.10.001466
ORF1ab/nsp126S6LtCGtTA1161B.10.000009
ORF1ab/nsp126S6LtCgtTg160160B.1.5640.068143
ORF1ab/nsp126S6LtCgtTg151151AY.1030.000938
ORF1ab/nsp126S6PTcgCcg147147All0.000028
ORF1ab/nsp126S6StcGtcT134145B.10.001227
ORF1ab/nsp126S6StcGtcA10145B.10.000092
ORF1ab/nsp126S6StcGtcC1145B.10.000009
ORF1ab/nsp126S6StcGtcC83138AY.1030.000515
ORF1ab/nsp126S6StcGtcT47138AY.1030.000292
ORF1ab/nsp126S6StcGtcA8138AY.1030.00005
ORF1ab/nsp126S6LtCgtTg137137B.1.1770.001804
ORF1ab/nsp126S6StcGtcT132134AY.420.00531
ORF1ab/nsp126S6StcGtcA2134AY.420.00008
ORF1ab/nsp126S6StcGtcT130131AY.60.005347
ORF1ab/nsp126S6StcGtcA1131AY.60.000041
ORF1ab/nsp126S6StcGtcT71121B.1.20.000625
ORF1ab/nsp126S6StcGtcA50121B.1.20.00044
ORF1ab/nsp126S6StcGtcT107111AY.290.001688
ORF1ab/nsp126S6StcGtcA4111AY.290.000063
ORF1ab/nsp126S6LtCgtTg107107B.1.415.10.810606
ORF1ab/nsp126S6StcGtcA5297AY.30.000517
ORF1ab/nsp126S6StcGtcT4497AY.30.000438
ORF1ab/nsp126S6StcGtcC197AY.30.00001
ORF1ab/nsp126S6LtCgtTg9797B.1.220.1278
ORF1ab/nsp126S6StcGtcA6190AY.440.000371
ORF1ab/nsp126S6StcGtcT2690AY.440.000158
ORF1ab/nsp126S6StcGtcC390AY.440.000018
ORF1ab/nsp126S6StcGtcA8689B.1.3110.023613
ORF1ab/nsp126S6StcGtcT389B.1.3110.000824
ORF1ab/nsp126S6delTCG---8787All0.000017
ORF1ab/nsp126S6StcGtcT6287AY.250.000373
ORF1ab/nsp126S6StcGtcA2387AY.250.000138
ORF1ab/nsp126S6StcGtcC287AY.250.000012
ORF1ab/nsp126S6LtCgtTg8484B.1.10.001524
ORF1ab/nsp126S6StcGtcT8182AY.160.030752
ORF1ab/nsp126S6StcGtcA182AY.160.00038
ORF1ab/nsp126S6StcGtcA7979B.1.177.600.017256
ORF1ab/nsp126S6LtCgtTg7474AY.1150.385417
ORF1ab/nsp126S6LtCgtTg7171B.1.2730.922078
ORF1ab/nsp126S6LtCgtTg7070AY.420.002816
ORF1ab/nsp126S6StcGtcT3969P.10.000614
ORF1ab/nsp126S6StcGtcA3069P.10.000473
ORF1ab/nsp126S6ATcgGcg6767All0.000013
ORF1ab/nsp126S6StcGtcA5061AY.200.001943
ORF1ab/nsp126S6StcGtcT1161AY.200.000428
ORF1ab/nsp126S6StcGtcT4455B.1.1770.000579
ORF1ab/nsp126S6StcGtcA1055B.1.1770.000132
ORF1ab/nsp126S6StcGtcC155B.1.1770.000013
ORF1ab/nsp126S6LtCgtTg5454B.1.177.800.10325
ORF1ab/nsp126S6StcGtcT5151A.2.50.025449
ORF1ab/nsp126S6LtCgtTg5151B.1.1.5190.002025
ORF1ab/nsp126S6LtCgtTg4848AY.470.001493
ORF1ab/nsp126S6LtCgtTg4848B.1.5260.001128
ORF1ab/nsp126S6StcGtcA3547AY.390.000865
ORF1ab/nsp126S6StcGtcT1247AY.390.000297
ORF1ab/nsp126S6StcGtcT4547B.1.1.5190.001787
ORF1ab/nsp126S6StcGtcA247B.1.1.5190.000079
ORF1ab/nsp126S6LtCgtTg4646B.1.1600.001435
ORF1ab/nsp126S6TTcgAcg3842All0.000007
ORF1ab/nsp126S6TTcGAcC242All0
ORF1ab/nsp126S6TTcGAcT142All0
ORF1ab/nsp126S6TTcGAcA142All0
ORF1ab/nsp126S6StcGtcT3640B.1.2580.002396
ORF1ab/nsp126S6StcGtcA440B.1.2580.000266
ORF1ab/nsp126S6StcGtcT3840P.1.170.006147
ORF1ab/nsp126S6StcGtcA240P.1.170.000324
ORF1ab/nsp126S6LtCgtTg3939B.1.4290.000918
ORF1ab/nsp126S6LtCgtTg3737AY.50.000764
ORF1ab/nsp126S6LtCgtTg3737B.1.5610.014688
ORF1ab/nsp126S6StcGtcA2336AY.470.000715
ORF1ab/nsp126S6StcGtcT1336AY.470.000404
ORF1ab/nsp126S6StcGtcT3034B.1.10.000544
ORF1ab/nsp126S6StcGtcA434B.1.10.000073
ORF1ab/nsp126S6StcGtcT3333B.1.1.2200.061338
ORF1ab/nsp126S6LtCgtTg3333P.10.00052
ORF1ab/nsp126S6StcGtcT2532AY.1170.002113
ORF1ab/nsp126S6StcGtcA732AY.1170.000592
ORF1ab/nsp126S6LtCgtTg3131AY.390.000766
ORF1ab/nsp126S6LtCgtTg3030AY.200.001166
ORF1ab/nsp126S6StcGtcT3030B.1.177.170.024631
ORF1ab/nsp126S6LtCgtTg3030B.1.6090.014382
ORF1ab/nsp126S6StcGtcT2829AY.260.000793
ORF1ab/nsp126S6StcGtcC129AY.260.000028
ORF1ab/nsp126S6StcGtcC2929B.1.1110.034078
ORF1ab/nsp126S6StcGtcT2528AY.98.10.001211
ORF1ab/nsp126S6StcGtcC328AY.98.10.000145
ORF1ab/nsp126S6LtCgtTg2828B.1.2430.001948
ORF1ab/nsp126S6StcGtcA2427AY.1000.001104
ORF1ab/nsp126S6StcGtcT327AY.1000.000138
ORF1ab/nsp126S6LtCgtTg2426AY.1130.003417
ORF1ab/nsp126S6LtCGtTA226AY.1130.000285
ORF1ab/nsp126S6LtCgtTg2626B.1.617.10.003353
ORF1ab/nsp126S6LtCgtTg2425AY.1020.000636
ORF1ab/nsp126S6LtCGtTA125AY.1020.000027
ORF1ab/nsp126S6LtCgtTg2525AY.1190.000883
ORF1ab/nsp126S6LtCgtTg2525AY.98.10.001211
ORF1ab/nsp126S6LtCgtTg2525B.1.2210.001776
ORF1ab/nsp126S6LtCgtTg2525B.1.4270.001262
ORF1ab/nsp126S6PTcgCcg2424B.1.1.70.000021
ORF1ab/nsp126S6delTCG---2424B.1.1.70.000021
ORF1ab/nsp126S6LtCgtTg2323AY.20.008191
ORF1ab/nsp126S6LtCgtTg2222AY.290.000347
ORF1ab/nsp126S6StcGtcA1622B.1.4290.000376
ORF1ab/nsp126S6StcGtcT622B.1.4290.000141
ORF1ab/nsp126S6LtCgtTg2121AY.1000.000966
ORF1ab/nsp126S6LtCgtTg2121AY.260.000595
ORF1ab/nsp126S6ATcgGcg2121B.1.1.70.000019
ORF1ab/nsp126S6LtCgtTg2020AY.4.20.000434
ORF1ab/nsp126S6StcGtcT1020B.1.2430.000696
ORF1ab/nsp126S6StcGtcA1020B.1.2430.000696
ORF1ab/nsp126S6LtCgtTg2020B.1.2580.001331
ORF1ab/nsp126S6LtCgtTg1919AY.1170.001606
ORF1ab/nsp126S6LtCgtTg1919AY.46.60.001372
ORF1ab/nsp126S6StcGtcT1719B.1.1600.00053
ORF1ab/nsp126S6StcGtcA219B.1.1600.000062
ORF1ab/nsp126S6LtCgtTg1919B.1.36.170.009387
ORF1ab/nsp126S6StcGtcT1919B.1.6200.017975
ORF1ab/nsp126S6StcGtcT1718AY.4.20.000369
ORF1ab/nsp126S6StcGtcA118AY.4.20.000022
ORF1ab/nsp126S6LtCgtTg1818AY.60.00074
ORF1ab/nsp126S6StcGtcT1818B.1.1.330.007576
ORF1ab/nsp126S6StcGtcA1018B.1.3510.000297
ORF1ab/nsp126S6StcGtcT818B.1.3510.000238
ORF1ab/nsp126S6LtCgtTg1818P.20.003359
ORF1ab/nsp126S6ATcgGcg1717B.1.1.2140.000943
ORF1ab/nsp126S6LtCgtTg1717B.1.3510.000505
ORF1ab/nsp126S6LtCgtTg1717B.1.621.10.008599
ORF1ab/nsp126S6StcGtcT1016AY.1210.001353
ORF1ab/nsp126S6StcGtcA616AY.1210.000812
ORF1ab/nsp126S6LtCgtTg1616AY.340.001551
ORF1ab/nsp126S6StcGtcA1515AY.3.10.001279
ORF1ab/nsp126S6StcGtcT1515B.1.177.580.019973
ORF1ab/nsp126S6PTcgCcg1515B.1.4270.000757
ORF1ab/nsp126S6LtCgtTg1515B.1.5960.001307
ORF1ab/nsp126S6StcGtcT1314AY.140.001144
ORF1ab/nsp126S6StcGtcC114AY.140.000088
ORF1ab/nsp126S6LtCgtTg1414B.1.1.2140.000776
ORF1ab/nsp126S6StcGtcT1414B.1.5090.012121
ORF1ab/nsp126S6LtCgtTg1414C.370.001625
ORF1ab/nsp126S6LtCgtTg1414D.20.001051
ORF1ab/nsp126S6del1tcGtc-1013All0.000002
ORF1ab/nsp126S6del1Tcg-cg113All0
ORF1ab/nsp126S6del1tCGtT-113All0
ORF1ab/nsp126S6del1tCGt-N113All0
ORF1ab/nsp126S6StcGtcT913AY.230.000628
ORF1ab/nsp126S6StcGtcA413AY.230.000279
ORF1ab/nsp126S6StcGtcA1113AY.670.005107
ORF1ab/nsp126S6StcGtcT213AY.670.000929
ORF1ab/nsp126S6StcGtcT1313AY.90.000879
ORF1ab/nsp126S6LtCgtTg1313B0.001662
ORF1ab/nsp126S6StcGtcT1313B.1.1.3050.050193
ORF1ab/nsp126S6StcGtcT1213B.1.2210.000852
ORF1ab/nsp126S6StcGtcA113B.1.2210.000071
ORF1ab/nsp126S6LtCgtTg1313Q.70.014444
ORF1ab/nsp126S6StcGtcT812AY.1180.000501
ORF1ab/nsp126S6StcGtcA412AY.1180.000251
ORF1ab/nsp126S6LtCgtTg1212AY.270.000777
ORF1ab/nsp126S6LtCgtTg1212AY.3.10.001023
ORF1ab/nsp126S6ATcgGcg1212AY.430.000053
ORF1ab/nsp126S6StcGtcT1212B.1.258.170.001248
ORF1ab/nsp126S6LtCgtTg1111AY.1180.000689
ORF1ab/nsp126S6LtCgtTg1111AY.230.000767
ORF1ab/nsp126S6LtCgtTg1111AY.90.000744
ORF1ab/nsp126S6TTcgAcg911B.1.1.70.000008
ORF1ab/nsp126S6TTcGAcT111B.1.1.70.000001
ORF1ab/nsp126S6TTcGAcA111B.1.1.70.000001
ORF1ab/nsp126S6LtCgtTg1111B.1.177.210.000841
ORF1ab/nsp126S6StcGtcT711B.1.2340.000924
ORF1ab/nsp126S6StcGtcA311B.1.2340.000396
ORF1ab/nsp126S6StcGtcC111B.1.2340.000132
ORF1ab/nsp126S6LtCgtTg1010AD.20.00219
ORF1ab/nsp126S6PTcgCcg1010AY.250.00006
ORF1ab/nsp126S6LtCgtTg1010AY.4.2.10.00149
ORF1ab/nsp126S6LtCgtTg1010AY.460.001041
ORF1ab/nsp126S6StcGtcT710B.1.4270.000353
ORF1ab/nsp126S6StcGtcA310B.1.4270.000151
ORF1ab/nsp126S6StcGtcT710B.1.5260.000165
ORF1ab/nsp126S6StcGtcA310B.1.5260.000071
ORF1ab/nsp126S6PTcgCcg1010B.1.617.20.000038
ORF1ab/nsp126S6LtCgtTg1010B.1.6210.000885
ORF1ab/nsp126S6LtCgtTg1010C.300.017271
ORF1ab/nsp126S6StcGtcT99A.2.40.030303
ORF1ab/nsp126S6XtCgtAg89All0.000002
ORF1ab/nsp126S6XtCGtGA19All0
ORF1ab/nsp126S6StcGtcT69AY.1190.000212
ORF1ab/nsp126S6StcGtcA29AY.1190.000071
ORF1ab/nsp126S6StcGtcC19AY.1190.000035
ORF1ab/nsp126S6LtCgtTg99AY.1200.000335
ORF1ab/nsp126S6StcGtcT99AY.16.10.004229
ORF1ab/nsp126S6ATcgGcg99AY.470.00028
ORF1ab/nsp126S6StcGtcT79AY.7.10.000789
ORF1ab/nsp126S6StcGtcA29AY.7.10.000225
ORF1ab/nsp126S6LtCgtTg99AY.980.000711
ORF1ab/nsp126S6StcGtcT69AY.980.000474
ORF1ab/nsp126S6StcGtcA39AY.980.000237
ORF1ab/nsp126S6LtCgtTg99B.1.1.3190.157895
ORF1ab/nsp126S6StcGtcT99B.1.177.860.001651
ORF1ab/nsp126S6StcGtcA99P.1.150.002091
ORF1ab/nsp126S6LtCgtTg88AY.1070.003728
ORF1ab/nsp126S6LtCgtTg88AY.330.000534
ORF1ab/nsp126S6TTcgAcg88AY.40.000012
ORF1ab/nsp126S6LtCgtTg88AY.450.000973
ORF1ab/nsp126S6PTcgCcg88AY.7.10.000902
ORF1ab/nsp126S6StcGtcA88AY.920.002298
ORF1ab/nsp126S6delTCG---88B.10.000073
ORF1ab/nsp126S6LtCgtTg88B.1.1.2220.001632
ORF1ab/nsp126S6LtCgtTg88B.1.3240.012841
ORF1ab/nsp126S6StcGtcT88B.1.3460.010485
ORF1ab/nsp126S6LtCgtTg88B.1.360.001167
ORF1ab/nsp126S6StcGtcT68B.1.360.000875
ORF1ab/nsp126S6StcGtcC28B.1.360.000292
ORF1ab/nsp126S6LtCgtTg88B.1.4090.00625
ORF1ab/nsp126S6LtCgtTg88B.1.438.10.000858
ORF1ab/nsp126S6StcGtcA37AY.1200.000112
ORF1ab/nsp126S6StcGtcT37AY.1200.000112
ORF1ab/nsp126S6StcGtcC17AY.1200.000037
ORF1ab/nsp126S6PTcgCcg77AY.340.000679
ORF1ab/nsp126S6StcGtcT67AY.360.000889
ORF1ab/nsp126S6StcGtcA17AY.360.000148
ORF1ab/nsp126S6PTcgCcg77AY.40.000011
ORF1ab/nsp126S6LtCgtTg77AY.4.50.000752
ORF1ab/nsp126S6TTcgAcg77AY.4.50.000752
ORF1ab/nsp126S6StcGtcT77AY.410.002058
ORF1ab/nsp126S6StcGtcT57AY.610.000524
ORF1ab/nsp126S6StcGtcA27AY.610.00021
ORF1ab/nsp126S6LtCgtTg77AY.750.000392
ORF1ab/nsp126S6StcGtcA77AY.75.10.001262
ORF1ab/nsp126S6StcGtcT67AY.99.20.000553
ORF1ab/nsp126S6StcGtcA17AY.99.20.000092
ORF1ab/nsp126S6StcGtcT77B.1.1.2220.001428
ORF1ab/nsp126S6StcGtcT67B.1.1.280.001867
ORF1ab/nsp126S6StcGtcA17B.1.1.280.000311
ORF1ab/nsp126S6LtCgtTg77B.1.1.2840.000752
ORF1ab/nsp126S6PTcgCcg77B.1.1770.000092
ORF1ab/nsp126S6LtCgtTg77B.1.177.60.006836
ORF1ab/nsp126S6LtCgtTg77B.1.36.280.04023
ORF1ab/nsp126S6PTcgCcg77B.1.6200.006623
ORF1ab/nsp126S6LtCgtTg77B.60.006369
ORF1ab/nsp126S6LtCGtTA36AY.1090.002219
ORF1ab/nsp126S6LtCgtTg36AY.1090.002219
ORF1ab/nsp126S6LtCgtTg66AY.5.30.002024
ORF1ab/nsp126S6StcGtcA46AY.540.000381
ORF1ab/nsp126S6StcGtcT26AY.540.000191
ORF1ab/nsp126S6LtCgtTg66AY.840.002625
ORF1ab/nsp126S6LtCgtTg66B.1.1.3060.00263
ORF1ab/nsp126S6LtCgtTg66B.1.1.3720.004132
ORF1ab/nsp126S6LtCgtTg66B.1.1.390.003058
ORF1ab/nsp126S6LtCgtTg66B.1.258.240.064516
ORF1ab/nsp126S6LtCgtTg66B.1.3670.004754
ORF1ab/nsp126S6LtCgtTg66B.1.3690.001711
ORF1ab/nsp126S6LtCgtTg66B.1.3910.006764
ORF1ab/nsp126S6LtCgtTg66B.1.3990.011605
ORF1ab/nsp126S6StcGtcT66B.1.4000.002574
ORF1ab/nsp126S6LtCgtTg66B.1.5740.012903
ORF1ab/nsp126S6LtCgtTg66C.360.005464
ORF1ab/nsp126S6StcGtcT56C.370.00058
ORF1ab/nsp126S6StcGtcA16C.370.000116
ORF1ab/nsp126S6FtCGtTT55All0.000001
ORF1ab/nsp126S6LtCgtTg55AY.1010.002452
ORF1ab/nsp126S6LtCgtTg55AY.1210.000677
ORF1ab/nsp126S6StcGtcT55AY.340.000485
ORF1ab/nsp126S6StcGtcT55AY.4.50.000537
ORF1ab/nsp126S6StcGtcT45AY.450.000487
ORF1ab/nsp126S6StcGtcA15AY.450.000122
ORF1ab/nsp126S6StcGtcA35AY.460.000312
ORF1ab/nsp126S6StcGtcT25AY.460.000208
ORF1ab/nsp126S6LtCgtTg55AY.46.40.000823
ORF1ab/nsp126S6LtCgtTg55AY.540.000477
ORF1ab/nsp126S6LtCgtTg55B.1.1.1530.005476
ORF1ab/nsp126S6LtCgtTg55B.1.1.2430.020408
ORF1ab/nsp126S6StcGtcT55B.1.1460.021186
ORF1ab/nsp126S6LtCgtTg55B.1.177.560.003338
ORF1ab/nsp126S6StcGtcT55B.1.177.690.007418
ORF1ab/nsp126S6StcGtcT55B.1.4560.01634
ORF1ab/nsp126S6LtCgtTg55B.1.4780.058824
ORF1ab/nsp126S6LtCgtTg55B.1.4990.005252
ORF1ab/nsp126S6StcGtcT55B.1.5160.009785
ORF1ab/nsp126S6LtCgtTg55B.1.5560.037594
ORF1ab/nsp126S6StcGtcT55B.1.5750.001517
ORF1ab/nsp126S6delTCG---55B.1.617.20.000019
ORF1ab/nsp126S6StcGtcT55P.20.000933
ORF1ab/nsp126S6PTcgCcg44AY.1030.000025
ORF1ab/nsp126S6LtCgtTg44AY.1080.00441
ORF1ab/nsp126S6LtCgtTg44AY.116.10.001246
ORF1ab/nsp126S6StcGtcT44AY.29.10.000882
ORF1ab/nsp126S6LtCgtTg44AY.320.00213
ORF1ab/nsp126S6StcGtcT34AY.320.001597
ORF1ab/nsp126S6StcGtcA14AY.320.000532
ORF1ab/nsp126S6LtCgtTg44AY.39.10.000158
ORF1ab/nsp126S6PTcgCcg44AY.4.20.000087
ORF1ab/nsp126S6StcGtcA34AY.4.40.001227
ORF1ab/nsp126S6StcGtcT14AY.4.40.000409
ORF1ab/nsp126S6LtCgtTg44AY.410.001176
ORF1ab/nsp126S6StcGtcT24AY.5.30.000675
ORF1ab/nsp126S6StcGtcA24AY.5.30.000675
ORF1ab/nsp126S6LtCgtTg44AY.620.001743
ORF1ab/nsp126S6StcGtcA34AY.9.10.000251
ORF1ab/nsp126S6StcGtcT14AY.9.10.000084
ORF1ab/nsp126S6TTcgAcg44AZ.20.003284
ORF1ab/nsp126S6delTCG---44B.1.10.000073
ORF1ab/nsp126S6LtCgtTg44B.1.1.2790.004484
ORF1ab/nsp126S6LtCgtTg44B.1.1.280.001245
ORF1ab/nsp126S6LtCgtTg44B.1.1.4340.001394
ORF1ab/nsp126S6StcGtcT44B.1.177.40.000844
ORF1ab/nsp126S6LtCgtTg44B.1.177.70.000659
ORF1ab/nsp126S6LtCgtTg44B.1.177.860.000734
ORF1ab/nsp126S6del1tcGtc-44B.1.20.000035
ORF1ab/nsp126S6delTCG---44B.1.20.000035
ORF1ab/nsp126S6LtCgtTg44B.1.3110.001098
ORF1ab/nsp126S6LtCgtTg44B.1.5250.000453
ORF1ab/nsp126S6StcGtcT24B.1.617.10.000258
ORF1ab/nsp126S6StcGtcA24B.1.617.10.000258
ORF1ab/nsp126S6LtCgtTg44P.1.140.000191
ORF1ab/nsp126S6LtCgtTg44R.10.00036
ORF1ab/nsp126S6LtCgtTg33A.2.50.001497
ORF1ab/nsp126S6WtCgtGg33All0.000001
ORF1ab/nsp126S6LtCgtTg33AY.1050.001929
ORF1ab/nsp126S6LtCgtTg33AY.1100.000338
ORF1ab/nsp126S6LtCgtTg33AY.1110.000549
ORF1ab/nsp126S6LtCgtTg33AY.120.000948
ORF1ab/nsp126S6StcGtcT33AY.330.0002
ORF1ab/nsp126S6PTcgCcg33AY.420.000121
ORF1ab/nsp126S6LtCgtTg33AY.5.40.00083
ORF1ab/nsp126S6StcGtcT23AY.530.000575
ORF1ab/nsp126S6StcGtcC13AY.530.000288
ORF1ab/nsp126S6LtCgtTg33AY.700.000626
ORF1ab/nsp126S6StcGtcT33AY.750.000168
ORF1ab/nsp126S6StcGtcT23AY.770.002255
ORF1ab/nsp126S6StcGtcA13AY.770.001127
ORF1ab/nsp126S6LtCGtTA33AY.780.004622
ORF1ab/nsp126S6LtCgtTg33AY.830.005172
ORF1ab/nsp126S6StcGtcA33AY.840.001312
ORF1ab/nsp126S6LtCgtTg33AY.91.10.012195
ORF1ab/nsp126S6LtCgtTg33AY.930.000819
ORF1ab/nsp126S6LtCgtTg33AY.990.003148
ORF1ab/nsp126S6LtCgtTg33AY.99.20.000276
ORF1ab/nsp126S6PTcgCcg33AY.99.20.000276
ORF1ab/nsp126S6XtCgtAg33B.10.000027
ORF1ab/nsp126S6StcGtcA23B.1.1.250.001137
ORF1ab/nsp126S6StcGtcT13B.1.1.250.000569
ORF1ab/nsp126S6LtCgtTg33B.1.1.2530.007519
ORF1ab/nsp126S6StcGtcT33B.1.1.3170.001235
ORF1ab/nsp126S6LtCgtTg33B.1.1.3170.001235
ORF1ab/nsp126S6LtCgtTg33B.1.1.330.001263
ORF1ab/nsp126S6StcGtcT33B.1.1.4120.022901
ORF1ab/nsp126S6LtCgtTg33B.1.1.500.002037
ORF1ab/nsp126S6LtCgtTg33B.1.1530.056604
ORF1ab/nsp126S6LtCgtTg33B.1.160.200.026786
ORF1ab/nsp126S6delTCG---33B.1.1770.00004
ORF1ab/nsp126S6LtCgtTg33B.1.177.100.002634
ORF1ab/nsp126S6LtCgtTg33B.1.177.170.002463
ORF1ab/nsp126S6StcGtcA33B.1.177.330.004934
ORF1ab/nsp126S6LtCgtTg33B.1.177.790.007026
ORF1ab/nsp126S6StcGtcA33B.1.221.30.0025
ORF1ab/nsp126S6LtCgtTg33B.1.351.20.000908
ORF1ab/nsp126S6LtCgtTg33B.1.36.290.001552
ORF1ab/nsp126S6StcGtcT33B.1.466.20.001174
ORF1ab/nsp126S6LtCgtTg33B.1.5320.018634
ORF1ab/nsp126S6StcGtcT33B.1.6090.001438
ORF1ab/nsp126S6LtCgtTg33B.1.6370.000219
ORF1ab/nsp126S6StcGtcC23C.360.001821
ORF1ab/nsp126S6StcGtcT13C.360.000911
ORF1ab/nsp126S6PTcgCcg33P.10.000047
ORF1ab/nsp126S6LtCgtTg33P.1.120.001452
ORF1ab/nsp126S6LtCgtTg33P.1.170.000485
ORF1ab/nsp126S6StcGtcT33P.1.70.000958
ORF1ab/nsp126S6LtCgtTg33P.1.70.000958
ORF1ab/nsp126S6LtCgtTg33Q.30.000435
ORF1ab/nsp126S6StcGtcT33Q.80.000495
ORF1ab/nsp126S6TTcgAcg120.055556
ORF1ab/nsp126S6TTcGAcC120.055556
ORF1ab/nsp126S6LtCgtTg22A.20.001324
ORF1ab/nsp126S6StcGtcT22A.2.5.20.003145
ORF1ab/nsp126S6LtCgtTg22A.23.10.001408
ORF1ab/nsp126S6LtCgtTg22AE.80.000978
ORF1ab/nsp126S6StcGtcT22AE.80.000978
ORF1ab/nsp126S6del2tCGt--22All0
ORF1ab/nsp126S6RTCGCGC12All0
ORF1ab/nsp126S6RTCGAGA12All0
ORF1ab/nsp126S6StcGtcT22AY.10.000791
ORF1ab/nsp126S6StcGtcT22AY.100.00106
ORF1ab/nsp126S6LtCgtTg22AY.1060.00067
ORF1ab/nsp126S6TTcgAcg22AY.1200.000074
ORF1ab/nsp126S6LtCgtTg22AY.120.2.10.000997
ORF1ab/nsp126S6StcGtcC12AY.130.000161
ORF1ab/nsp126S6StcGtcA12AY.130.000161
ORF1ab/nsp126S6LtCgtTg22AY.140.000176
ORF1ab/nsp126S6LtCgtTg22AY.240.000862
ORF1ab/nsp126S6LtCgtTg22AY.300.000791
ORF1ab/nsp126S6LtCgtTg22AY.350.000466
ORF1ab/nsp126S6LtCgtTg22AY.360.000296
ORF1ab/nsp126S6del1tcGtc-22AY.40.000003
ORF1ab/nsp126S6delTCG---22AY.4.50.000215
ORF1ab/nsp126S6delTCG---22AY.430.000009
ORF1ab/nsp126S6PTcgCcg22AY.430.000009
ORF1ab/nsp126S6PTcgCcg22AY.440.000012
ORF1ab/nsp126S6StcGtcT22AY.46.60.000144
ORF1ab/nsp126S6StcGtcT12AY.5.40.000277
ORF1ab/nsp126S6StcGtcA12AY.5.40.000277
ORF1ab/nsp126S6StcGtcT22AY.550.001835
ORF1ab/nsp126S6LtCgtTg22AY.610.00021
ORF1ab/nsp126S6LtCgtTg22AY.690.000373
ORF1ab/nsp126S6LtCgtTg22AY.70.000392
ORF1ab/nsp126S6LtCgtTg22AY.740.000231
ORF1ab/nsp126S6delTCG---22AY.750.000112
ORF1ab/nsp126S6LtCgtTg22AY.790.002421
ORF1ab/nsp126S6StcGtcT22AY.860.00166
ORF1ab/nsp126S6LtCgtTg22AY.880.001768
ORF1ab/nsp126S6TTcgAcg22AY.90.000135
ORF1ab/nsp126S6LtCgtTg22AY.9.10.000167
ORF1ab/nsp126S6StcGtcT22AY.9.20.000073
ORF1ab/nsp126S6LtCgtTg22AY.9.20.000073
ORF1ab/nsp126S6PTcgCcg22B.10.000018
ORF1ab/nsp126S6LtCgtTg22B.1.1.1410.004024
ORF1ab/nsp126S6LtCgtTg22B.1.1.1700.002494
ORF1ab/nsp126S6PTcgCcg22B.1.1.1890.003026
ORF1ab/nsp126S6StcGtcC22B.1.1.1960.011429
ORF1ab/nsp126S6StcGtcT22B.1.1.2140.000111
ORF1ab/nsp126S6LtCgtTg22B.1.1.2160.001781
ORF1ab/nsp126S6LtCgtTg22B.1.1.290.020619
ORF1ab/nsp126S6StcGtcA22B.1.1.3160.00185
ORF1ab/nsp126S6StcGtcT22B.1.1.3180.000604
ORF1ab/nsp126S6PTcgCcg22B.1.1.3350.025974
ORF1ab/nsp126S6LtCgtTg22B.1.1.3480.001592
ORF1ab/nsp126S6StcGtcA12B.1.1.3540.004386
ORF1ab/nsp126S6StcGtcT12B.1.1.3540.004386
ORF1ab/nsp126S6StcGtcA22B.1.1.3710.020833
ORF1ab/nsp126S6StcGtcT22B.1.1.3770.002762
ORF1ab/nsp126S6LtCgtTg22B.1.1.4160.00181
ORF1ab/nsp126S6StcGtcT22B.1.1.4320.002532
ORF1ab/nsp126S6LtCgtTg22B.1.1.4480.004065
ORF1ab/nsp126S6LtCgtTg22B.1.1.4860.003155
ORF1ab/nsp126S6StcGtcT12B.1.1.630.000386
ORF1ab/nsp126S6StcGtcA12B.1.1.630.000386
ORF1ab/nsp126S6FtCGtTT22B.1.1.70.000002
ORF1ab/nsp126S6del1tcGtc-12B.1.1.70.000001
ORF1ab/nsp126S6del1Tcg-cg12B.1.1.70.000001
ORF1ab/nsp126S6LtCgtTg22B.1.1.700.000682
ORF1ab/nsp126S6LtCgtTg22B.1.1080.011628
ORF1ab/nsp126S6LtCgtTg22B.1.160.160.001859
ORF1ab/nsp126S6LtCgtTg22B.1.1660.016949
ORF1ab/nsp126S6LtCgtTg22B.1.177.120.000303
ORF1ab/nsp126S6LtCgtTg22B.1.177.150.001262
ORF1ab/nsp126S6LtCgtTg22B.1.177.330.003289
ORF1ab/nsp126S6LtCgtTg22B.1.177.40.000422
ORF1ab/nsp126S6LtCgtTg22B.1.177.400.010309
ORF1ab/nsp126S6StcGtcT22B.1.177.530.004785
ORF1ab/nsp126S6LtCgtTg22B.1.177.570.000562
ORF1ab/nsp126S6delTCG---22B.1.177.600.000437
ORF1ab/nsp126S6LtCgtTg22B.1.177.600.000437
ORF1ab/nsp126S6StcGtcA22B.1.177.710.020202
ORF1ab/nsp126S6LtCgtTg22B.1.2360.004107
ORF1ab/nsp126S6StcGtcT22B.1.2390.002442
ORF1ab/nsp126S6LtCgtTg22B.1.2390.002442
ORF1ab/nsp126S6StcGtcA22B.1.2400.000431
ORF1ab/nsp126S6LtCgtTg22B.1.258.20.009009
ORF1ab/nsp126S6PTcgCcg22B.1.3050.004301
ORF1ab/nsp126S6ATcgGcg22B.1.4270.000101
ORF1ab/nsp126S6StcGtcC22B.1.4280.002041
ORF1ab/nsp126S6PTcgCcg22B.1.5710.019417
ORF1ab/nsp126S6LtCgtTg22B.1.5820.000981
ORF1ab/nsp126S6StcGtcT12B.1.5960.000087
ORF1ab/nsp126S6StcGtcA12B.1.5960.000087
ORF1ab/nsp126S6StcGtcA12B.1.5970.00463
ORF1ab/nsp126S6StcGtcT12B.1.5970.00463
ORF1ab/nsp126S6ATcgGcg22B.1.617.20.000008
ORF1ab/nsp126S6StcGtcA22B.1.6210.000177
ORF1ab/nsp126S6StcGtcT22B.1.6370.000146
ORF1ab/nsp126S6LtCgtTg22B.100.016529
ORF1ab/nsp126S6LtCgtTg22C.180.005181
ORF1ab/nsp126S6LtCgtTg22C.350.001548
ORF1ab/nsp126S6LtCgtTg22N.50.003534
ORF1ab/nsp126S6delTCG---22P.10.000032
ORF1ab/nsp126S6StcGtcA22P.1.100.000539
ORF1ab/nsp126S6LtCgtTg22P.1.20.002312
ORF1ab/nsp126S6LtCgtTg22Q.10.000253
ORF1ab/nsp126S6LtCgtTg22Q.20.001227
ORF1ab/nsp126S6StcGtcT22R.10.00018
ORF1ab/nsp126S6StcGtcC110.055556
ORF1ab/nsp126S6LtCgtTg11A0.000387
ORF1ab/nsp126S6XtCgtAg11A0.000387
ORF1ab/nsp126S6LtCgtTg11A.10.000282
ORF1ab/nsp126S6StcGtcT11A.280.002646
ORF1ab/nsp126S6StcGtcT11A.30.002096
ORF1ab/nsp126S6MTCgATg11All0
ORF1ab/nsp126S6KTCGAAA11All0
ORF1ab/nsp126S6ITCGATT11All0
ORF1ab/nsp126S6CtCGtGC11All0
ORF1ab/nsp126S6LtCgtTg11AY.10.000396
ORF1ab/nsp126S6LtCgtTg11AY.100.00053
ORF1ab/nsp126S6PTcgCcg11AY.1020.000027
ORF1ab/nsp126S6StcGtcA11AY.1050.000643
ORF1ab/nsp126S6StcGtcT11AY.1060.000335
ORF1ab/nsp126S6StcGtcT11AY.1070.000466
ORF1ab/nsp126S6delTCG---11AY.1110.000183
ORF1ab/nsp126S6StcGtcT11AY.1110.000183
ORF1ab/nsp126S6StcGtcA11AY.1160.000287
ORF1ab/nsp126S6delTCG---11AY.1180.000063
ORF1ab/nsp126S6PTcgCcg11AY.1180.000063
ORF1ab/nsp126S6delTCG---11AY.1190.000035
ORF1ab/nsp126S6WtCgtGg11AY.120.000316
ORF1ab/nsp126S6StcGtcT11AY.120.000316
ORF1ab/nsp126S6PTcgCcg11AY.1210.000135
ORF1ab/nsp126S6LtCgtTg11AY.160.00038
ORF1ab/nsp126S6LtCgtTg11AY.16.10.00047
ORF1ab/nsp126S6TTcgAcg11AY.170.008197
ORF1ab/nsp126S6StcGtcT11AY.190.00114
ORF1ab/nsp126S6LtCgtTg11AY.210.001898
ORF1ab/nsp126S6delTCG---11AY.230.00007
ORF1ab/nsp126S6StcGtcA11AY.240.000431
ORF1ab/nsp126S6delTCG---11AY.250.000006
ORF1ab/nsp126S6TTcgAcg11AY.260.000028
ORF1ab/nsp126S6PTcgCcg11AY.260.000028
ORF1ab/nsp126S6delTCG---11AY.260.000028
ORF1ab/nsp126S6StcGtcT11AY.270.000065
ORF1ab/nsp126S6StcGtcT11AY.300.000396
ORF1ab/nsp126S6delTCG---11AY.40.000002
ORF1ab/nsp126S6WtCgtGg11AY.40.000002
ORF1ab/nsp126S6LtCgtTg11AY.4.40.000409
ORF1ab/nsp126S6RTCGCGC11AY.430.000004
ORF1ab/nsp126S6del2tCGt--11AY.430.000004
ORF1ab/nsp126S6PTcgCcg11AY.460.000104
ORF1ab/nsp126S6StcGtcT11AY.510.000909
ORF1ab/nsp126S6LtCgtTg11AY.520.000814
ORF1ab/nsp126S6LtCgtTg11AY.530.000288
ORF1ab/nsp126S6PTcgCcg11AY.540.000095
ORF1ab/nsp126S6LtCgtTg11AY.550.000917
ORF1ab/nsp126S6StcGtcT11AY.620.000436
ORF1ab/nsp126S6LtCgtTg11AY.670.000464
ORF1ab/nsp126S6LtCgtTg11AY.680.000274
ORF1ab/nsp126S6StcGtcT11AY.70.000196
ORF1ab/nsp126S6LtCgtTg11AY.7.10.000113
ORF1ab/nsp126S6LtCgtTg11AY.720.001361
ORF1ab/nsp126S6LtCgtTg11AY.75.10.00018
ORF1ab/nsp126S6delTCG---11AY.75.10.00018
ORF1ab/nsp126S6StcGtcA11AY.80.000606
ORF1ab/nsp126S6TTcgAcg11AY.80.000606
ORF1ab/nsp126S6LtCgtTg11AY.850.000427
ORF1ab/nsp126S6StcGtcT11AY.850.000427
ORF1ab/nsp126S6StcGtcA11AY.870.000833
ORF1ab/nsp126S6StcGtcA11AY.890.004902
ORF1ab/nsp126S6PTcgCcg11AY.9.10.000084
ORF1ab/nsp126S6delTCG---11AY.9.20.000037
ORF1ab/nsp126S6StcGtcA11AY.900.000684
ORF1ab/nsp126S6StcGtcT11AY.910.00073
ORF1ab/nsp126S6LtCgtTg11AY.910.00073
ORF1ab/nsp126S6LtCgtTg11AY.940.000443
ORF1ab/nsp126S6StcGtcA11AY.940.000443
ORF1ab/nsp126S6StcGtcA11AY.950.000761
ORF1ab/nsp126S6PTcgCcg11AY.98.10.000048
ORF1ab/nsp126S6delTCG---11AY.990.001049
ORF1ab/nsp126S6StcGtcT11AY.990.001049
ORF1ab/nsp126S6StcGtcT11AY.99.10.001553
ORF1ab/nsp126S6LtCgtTg11AZ.20.000821
ORF1ab/nsp126S6XtCgtAg11B0.000128
ORF1ab/nsp126S6ATcgGcg11B0.000128
ORF1ab/nsp126S6del1tCGtT-11B0.000128
ORF1ab/nsp126S6del2tCGt--11B.10.000009
ORF1ab/nsp126S6TTcgAcg11B.10.000009
ORF1ab/nsp126S6PTcgCcg11B.1.10.000018
ORF1ab/nsp126S6del1tcGtc-11B.1.10.000018
ORF1ab/nsp126S6LtCgtTg11B.1.1.10.000327
ORF1ab/nsp126S6delTCG---11B.1.1.10.000327
ORF1ab/nsp126S6LtCgtTg11B.1.1.100.001115
ORF1ab/nsp126S6LtCgtTg11B.1.1.1210.002427
ORF1ab/nsp126S6LtCgtTg11B.1.1.1320.014925
ORF1ab/nsp126S6LtCgtTg11B.1.1.1520.04
ORF1ab/nsp126S6LtCgtTg11B.1.1.1570.000913
ORF1ab/nsp126S6StcGtcT11B.1.1.1570.000913
ORF1ab/nsp126S6PTcgCcg11B.1.1.1570.000913
ORF1ab/nsp126S6LtCgtTg11B.1.1.1590.004673
ORF1ab/nsp126S6LtCgtTg11B.1.1.1690.018182
ORF1ab/nsp126S6LtCgtTg11B.1.1.2070.001182
ORF1ab/nsp126S6LtCgtTg11B.1.1.2200.001859
ORF1ab/nsp126S6LtCgtTg11B.1.1.2240.014286
ORF1ab/nsp126S6LtCgtTg11B.1.1.2270.004348
ORF1ab/nsp126S6StcGtcT11B.1.1.2410.00207
ORF1ab/nsp126S6LtCgtTg11B.1.1.250.000569
ORF1ab/nsp126S6StcGtcT11B.1.1.2840.000107
ORF1ab/nsp126S6StcGtcT11B.1.1.2940.001266
ORF1ab/nsp126S6LtCgtTg11B.1.1.2940.001266
ORF1ab/nsp126S6StcGtcA11B.1.1.3010.001179
ORF1ab/nsp126S6TTcGAcC11B.1.1.3060.000438
ORF1ab/nsp126S6CtCGtGC11B.1.1.3060.000438
ORF1ab/nsp126S6del1tCGt-N11B.1.1.3060.000438
ORF1ab/nsp126S6StcGtcT11B.1.1.3060.000438
ORF1ab/nsp126S6LtCgtTg11B.1.1.3160.000925
ORF1ab/nsp126S6del1tcGtc-11B.1.1.3170.000412
ORF1ab/nsp126S6TTcgAcg11B.1.1.3180.000302
ORF1ab/nsp126S6LtCgtTg11B.1.1.3180.000302
ORF1ab/nsp126S6StcGtcT11B.1.1.3260.001761
ORF1ab/nsp126S6PTcgCcg11B.1.1.330.000421
ORF1ab/nsp126S6LtCgtTg11B.1.1.3350.012987
ORF1ab/nsp126S6delTCG---11B.1.1.3480.000796
ORF1ab/nsp126S6LtCgtTg11B.1.1.3510.002793
ORF1ab/nsp126S6LtCgtTg11B.1.1.3560.008547
ORF1ab/nsp126S6PTcgCcg11B.1.1.3590.027778
ORF1ab/nsp126S6LtCgtTg11B.1.1.3690.000446
ORF1ab/nsp126S6StcGtcT11B.1.1.390.00051
ORF1ab/nsp126S6LtCgtTg11B.1.1.3930.111111
ORF1ab/nsp126S6StcGtcT11B.1.1.3960.045455
ORF1ab/nsp126S6StcGtcT11B.1.1.4090.002833
ORF1ab/nsp126S6LtCgtTg11B.1.1.4110.014706
ORF1ab/nsp126S6LtCgtTg11B.1.1.4200.001006
ORF1ab/nsp126S6LtCgtTg11B.1.1.5170.006803
ORF1ab/nsp126S6LtCgtTg11B.1.1.5230.001563
ORF1ab/nsp126S6ATcgGcg11B.1.1.5260.003546
ORF1ab/nsp126S6LtCgtTg11B.1.1.630.000386
ORF1ab/nsp126S6ITCGATT11B.1.1.70.000001
ORF1ab/nsp126S6MTCgATg11B.1.1.70.000001
ORF1ab/nsp126S6RTCGAGA11B.1.1.70.000001
ORF1ab/nsp126S6XtCGtGA11B.1.1.70.000001
ORF1ab/nsp126S6KTCGAAA11B.1.1.70.000001
ORF1ab/nsp126S6StcGtcT11B.1.1.700.000341
ORF1ab/nsp126S6delTCG---11B.1.1.700.000341
ORF1ab/nsp126S6LtCgtTg11B.1.1.750.010638
ORF1ab/nsp126S6LtCgtTg11B.1.1.830.00271
ORF1ab/nsp126S6LtCgtTg11B.1.110.30.000718
ORF1ab/nsp126S6LtCgtTg11B.1.1280.000635
ORF1ab/nsp126S6LtCgtTg11B.1.1390.000733
ORF1ab/nsp126S6StcGtcT11B.1.140.017544
ORF1ab/nsp126S6LtCgtTg11B.1.1420.002899
ORF1ab/nsp126S6LtCgtTg11B.1.1470.000756
ORF1ab/nsp126S6StcGtcT11B.1.1470.000756
ORF1ab/nsp126S6LtCgtTg11B.1.1490.003425
ORF1ab/nsp126S6StcGtcT11B.1.160.140.002119
ORF1ab/nsp126S6LtCgtTg11B.1.160.220.006757
ORF1ab/nsp126S6LtCgtTg11B.1.160.280.002924
ORF1ab/nsp126S6LtCgtTg11B.1.160.320.004292
ORF1ab/nsp126S6LtCgtTg11B.1.1610.017241
ORF1ab/nsp126S6StcGtcT11B.1.177.120.000152
ORF1ab/nsp126S6delTCG---11B.1.177.120.000152
ORF1ab/nsp126S6LtCgtTg11B.1.177.180.00116
ORF1ab/nsp126S6delTCG---11B.1.177.210.000076
ORF1ab/nsp126S6LtCgtTg11B.1.177.320.00135
ORF1ab/nsp126S6LtCgtTg11B.1.177.430.001477
ORF1ab/nsp126S6StcGtcT11B.1.177.440.000519
ORF1ab/nsp126S6LtCgtTg11B.1.177.450.000381
ORF1ab/nsp126S6LtCgtTg11B.1.177.50.001242
ORF1ab/nsp126S6StcGtcA11B.1.177.540.000606
ORF1ab/nsp126S6StcGtcA11B.1.177.620.001192
ORF1ab/nsp126S6LtCgtTg11B.1.177.720.00339
ORF1ab/nsp126S6LtCgtTg11B.1.177.730.000566
ORF1ab/nsp126S6delTCG---11B.1.177.730.000566
ORF1ab/nsp126S6LtCgtTg11B.1.177.770.000726
ORF1ab/nsp126S6StcGtcA11B.1.177.790.002342
ORF1ab/nsp126S6LtCgtTg11B.1.177.80.000752
ORF1ab/nsp126S6StcGtcA11B.1.177.820.000477
ORF1ab/nsp126S6delTCG---11B.1.177.830.001481
ORF1ab/nsp126S6StcGtcT11B.1.177.830.001481
ORF1ab/nsp126S6LtCgtTg11B.1.1890.004292
ORF1ab/nsp126S6PTcgCcg11B.1.20.000009
ORF1ab/nsp126S6LtCgtTg11B.1.2030.0625
ORF1ab/nsp126S6LtCgtTg11B.1.214.20.0006
ORF1ab/nsp126S6PTcgCcg11B.1.2210.000071
ORF1ab/nsp126S6StcGtcA11B.1.221.10.002907
ORF1ab/nsp126S6delTCG---11B.1.2220.001692
ORF1ab/nsp126S6LtCgtTg11B.1.2340.000132
ORF1ab/nsp126S6StcGtcT11B.1.2360.002053
ORF1ab/nsp126S6LtCgtTg11B.1.2370.004975
ORF1ab/nsp126S6delTCG---11B.1.2580.000067
ORF1ab/nsp126S6delTCG---11B.1.258.100.011364
ORF1ab/nsp126S6StcGtcT11B.1.258.70.001912
ORF1ab/nsp126S6StcGtcT11B.1.2980.002114
ORF1ab/nsp126S6FtCGtTT11B.1.3110.000275
ORF1ab/nsp126S6StcGtcT11B.1.3360.002439
ORF1ab/nsp126S6LtCgtTg11B.1.3460.001311
ORF1ab/nsp126S6LtCgtTg11B.1.3490.000715
ORF1ab/nsp126S6PTcgCcg11B.1.3510.00003
ORF1ab/nsp126S6LtCgtTg11B.1.3560.001727
ORF1ab/nsp126S6StcGtcT11B.1.3590.022727
ORF1ab/nsp126S6delTCG---11B.1.360.000146
ORF1ab/nsp126S6LtCgtTg11B.1.36.10.00114
ORF1ab/nsp126S6LtCgtTg11B.1.36.160.001425
ORF1ab/nsp126S6StcGtcT11B.1.36.160.001425
ORF1ab/nsp126S6StcGtcT11B.1.36.170.000494
ORF1ab/nsp126S6FtCGtTT11B.1.36.170.000494
ORF1ab/nsp126S6LtCgtTg11B.1.36.180.00042
ORF1ab/nsp126S6StcGtcA11B.1.36.180.00042
ORF1ab/nsp126S6LtCgtTg11B.1.36.260.002857
ORF1ab/nsp126S6LtCgtTg11B.1.36.360.000602
ORF1ab/nsp126S6LtCgtTg11B.1.3610.001289
ORF1ab/nsp126S6StcGtcT11B.1.3620.001541
ORF1ab/nsp126S6StcGtcT11B.1.3810.007812
ORF1ab/nsp126S6LtCgtTg11B.1.390.003906
ORF1ab/nsp126S6LtCgtTg11B.1.3970.004854
ORF1ab/nsp126S6LtCgtTg11B.1.4000.000429
ORF1ab/nsp126S6PTcgCcg11B.1.4060.006061
ORF1ab/nsp126S6delTCG---11B.1.4270.00005
ORF1ab/nsp126S6LtCgtTg11B.1.4410.009615
ORF1ab/nsp126S6StcGtcT11B.1.4500.011364
ORF1ab/nsp126S6LtCgtTg11B.1.4530.003236
ORF1ab/nsp126S6delTCG---11B.1.4560.003268
ORF1ab/nsp126S6LtCgtTg11B.1.466.20.000391
ORF1ab/nsp126S6LtCgtTg11B.1.4740.001901
ORF1ab/nsp126S6LtCgtTg11B.1.5030.002488
ORF1ab/nsp126S6StcGtcA11B.1.5050.004386
ORF1ab/nsp126S6LtCgtTg11B.1.5060.02381
ORF1ab/nsp126S6LtCgtTg11B.1.5170.000427
ORF1ab/nsp126S6StcGtcT11B.1.5200.021739
ORF1ab/nsp126S6PTcgCcg11B.1.5260.000024
ORF1ab/nsp126S6LtCgtTg11B.1.5310.083333
ORF1ab/nsp126S6delTCG---11B.1.5330.009615
ORF1ab/nsp126S6LtCgtTg11B.1.5400.009709
ORF1ab/nsp126S6LtCgtTg11B.1.5510.00129
ORF1ab/nsp126S6StcGtcT11B.1.5580.004566
ORF1ab/nsp126S6LtCgtTg11B.1.5600.00463
ORF1ab/nsp126S6StcGtcT11B.1.5600.00463
ORF1ab/nsp126S6StcGtcT11B.1.5610.000397
ORF1ab/nsp126S6PTcgCcg11B.1.5640.000426
ORF1ab/nsp126S6StcGtcT11B.1.5640.000426
ORF1ab/nsp126S6LtCgtTg11B.1.564.10.001577
ORF1ab/nsp126S6StcGtcT11B.1.5680.001111
ORF1ab/nsp126S6LtCgtTg11B.1.5800.004065
ORF1ab/nsp126S6PTcgCcg11B.1.5810.009434
ORF1ab/nsp126S6delTCG---11B.1.5850.027778
ORF1ab/nsp126S6LtCgtTg11B.1.5870.001898
ORF1ab/nsp126S6LtCgtTg11B.1.5880.00091
ORF1ab/nsp126S6LtCgtTg11B.1.5900.004545
ORF1ab/nsp126S6StcGtcT11B.1.5950.000261
ORF1ab/nsp126S6LtCgtTg11B.1.5950.000261
ORF1ab/nsp126S6LtCgtTg11B.1.595.10.005848
ORF1ab/nsp126S6XtCgtAg11B.1.5960.000087
ORF1ab/nsp126S6ATcgGcg11B.1.5990.00365
ORF1ab/nsp126S6del1tcGtc-11B.1.617.20.000004
ORF1ab/nsp126S6LtCgtTg11B.1.619.10.000641
ORF1ab/nsp126S6LtCgtTg11B.1.6200.000946
ORF1ab/nsp126S6FtCGtTT11B.1.6230.000536
ORF1ab/nsp126S6StcGtcT11B.1.6260.005714
ORF1ab/nsp126S6LtCgtTg11B.400.000364
ORF1ab/nsp126S6PTcgCcg11B.60.00091
ORF1ab/nsp126S6XtCgtAg11B.6.30.026316
ORF1ab/nsp126S6LtCgtTg11B.610.005747
ORF1ab/nsp126S6LtCgtTg11C.140.004329
ORF1ab/nsp126S6LtCgtTg11C.160.00106
ORF1ab/nsp126S6LtCgtTg11C.170.055556
ORF1ab/nsp126S6LtCgtTg11C.230.005814
ORF1ab/nsp126S6StcGtcT11C.36.10.004149
ORF1ab/nsp126S6LtCgtTg11C.36.20.034483
ORF1ab/nsp126S6StcGtcT11C.36.30.000567
ORF1ab/nsp126S6StcGtcT11D.20.000075
ORF1ab/nsp126S6ATcgGcg11D.20.000075
ORF1ab/nsp126S6LtCgtTg11D.30.005917
ORF1ab/nsp126S6StcGtcT11D.50.004975
ORF1ab/nsp126S6WtCgtGg11P.10.000016
ORF1ab/nsp126S6XtCgtAg11P.1.10.000318
ORF1ab/nsp126S6LtCgtTg11P.1.100.000269
ORF1ab/nsp126S6delTCG---11P.1.120.000484
ORF1ab/nsp126S6StcGtcT11P.1.140.000048
ORF1ab/nsp126S6delTCG---11P.1.150.000232
ORF1ab/nsp126S6StcGtcA11P.1.160.000374
ORF1ab/nsp126S6LtCgtTg11P.1.40.000977
ORF1ab/nsp126S6LtCgtTg11P.1.80.004785
ORF1ab/nsp126S6delTCG---11P.20.000187
ORF1ab/nsp126S6StcGtcA11Q.10.000126
ORF1ab/nsp126S6delTCG---11Q.80.000165
ORF1ab/nsp126S6LtCgtTg11U.30.003861
ORF1ab/nsp126S6PTcgCcg11U.30.003861
ORF1ab/nsp126S6StcGtcA11W.40.001351

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.