CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 572 & Codon = caC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12572H572HH4964HsyncaTcaC639639115154-15156

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12572H572HcaTcaC639639All0.000122
ORF1ab/nsp12572H572HcaTcaC216216B.1.1.70.000193
ORF1ab/nsp12572H572HcaTcaC134134B.1.1.2360.924138
ORF1ab/nsp12572H572HcaTcaC6464B.1.20.000564
ORF1ab/nsp12572H572HcaTcaC2727P.1.130.024259
ORF1ab/nsp12572H572HcaTcaC2626B.1.177.160.017276
ORF1ab/nsp12572H572HcaTcaC1919AY.440.000116
ORF1ab/nsp12572H572HcaTcaC1717AY.40.000026
ORF1ab/nsp12572H572HcaTcaC1515B.1.617.20.000056
ORF1ab/nsp12572H572HcaTcaC1212B.1.10.000218
ORF1ab/nsp12572H572HcaTcaC1111B.10.000101
ORF1ab/nsp12572H572HcaTcaC77B.1.1600.000218
ORF1ab/nsp12572H572HcaTcaC55B.1.1.630.001929
ORF1ab/nsp12572H572HcaTcaC55B.1.1770.000066
ORF1ab/nsp12572H572HcaTcaC55P.10.000079
ORF1ab/nsp12572H572HcaTcaC44B.1.1.1890.006051
ORF1ab/nsp12572H572HcaTcaC33AY.430.000013
ORF1ab/nsp12572H572HcaTcaC33AY.630.001161
ORF1ab/nsp12572H572HcaTcaC33B.1.36.290.001552
ORF1ab/nsp12572H572HcaTcaC22AY.1030.000012
ORF1ab/nsp12572H572HcaTcaC22AY.250.000012
ORF1ab/nsp12572H572HcaTcaC22AY.390.000049
ORF1ab/nsp12572H572HcaTcaC22AY.650.001066
ORF1ab/nsp12572H572HcaTcaC22AY.840.000875
ORF1ab/nsp12572H572HcaTcaC22B.1.1.3180.000604
ORF1ab/nsp12572H572HcaTcaC22B.1.2210.000142
ORF1ab/nsp12572H572HcaTcaC22B.1.3510.000059
ORF1ab/nsp12572H572HcaTcaC22B.1.4270.000101
ORF1ab/nsp12572H572HcaTcaC22B.1.4290.000047
ORF1ab/nsp12572H572HcaTcaC22B.1.5110.068966
ORF1ab/nsp12572H572HcaTcaC22B.1.6210.000177
ORF1ab/nsp12572H572HcaTcaC11A.2.40.003367
ORF1ab/nsp12572H572HcaTcaC11AY.1070.000466
ORF1ab/nsp12572H572HcaTcaC11AY.1140.000231
ORF1ab/nsp12572H572HcaTcaC11AY.1180.000063
ORF1ab/nsp12572H572HcaTcaC11AY.1200.000037
ORF1ab/nsp12572H572HcaTcaC11AY.200.000039
ORF1ab/nsp12572H572HcaTcaC11AY.230.00007
ORF1ab/nsp12572H572HcaTcaC11AY.260.000028
ORF1ab/nsp12572H572HcaTcaC11AY.30.00001
ORF1ab/nsp12572H572HcaTcaC11AY.320.000532
ORF1ab/nsp12572H572HcaTcaC11AY.330.000067
ORF1ab/nsp12572H572HcaTcaC11AY.360.000148
ORF1ab/nsp12572H572HcaTcaC11AY.420.00004
ORF1ab/nsp12572H572HcaTcaC11AY.50.000021
ORF1ab/nsp12572H572HcaTcaC11AY.5.30.000337
ORF1ab/nsp12572H572HcaTcaC11AY.590.00053
ORF1ab/nsp12572H572HcaTcaC11AY.610.000105
ORF1ab/nsp12572H572HcaTcaC11AY.620.000436
ORF1ab/nsp12572H572HcaTcaC11AY.740.000116
ORF1ab/nsp12572H572HcaTcaC11AY.750.000056
ORF1ab/nsp12572H572HcaTcaC11AY.950.000761
ORF1ab/nsp12572H572HcaTcaC11AY.98.10.000048
ORF1ab/nsp12572H572HcaTcaC11B.1.1.3120.001912
ORF1ab/nsp12572H572HcaTcaC11B.1.1.3980.003226
ORF1ab/nsp12572H572HcaTcaC11B.1.1.5190.00004
ORF1ab/nsp12572H572HcaTcaC11B.1.177.210.000076
ORF1ab/nsp12572H572HcaTcaC11B.1.177.530.002392
ORF1ab/nsp12572H572HcaTcaC11B.1.177.580.001332
ORF1ab/nsp12572H572HcaTcaC11B.1.2400.000216
ORF1ab/nsp12572H572HcaTcaC11B.1.3110.000275
ORF1ab/nsp12572H572HcaTcaC11B.1.360.000146
ORF1ab/nsp12572H572HcaTcaC11B.1.36.70.004
ORF1ab/nsp12572H572HcaTcaC11B.1.438.10.000107
ORF1ab/nsp12572H572HcaTcaC11B.1.4930.025641
ORF1ab/nsp12572H572HcaTcaC11B.1.5950.000261
ORF1ab/nsp12572H572HcaTcaC11B.1.6280.000352
ORF1ab/nsp12572H572HcaTcaC11C.10.002392
ORF1ab/nsp12572H572HcaTcaC11C.160.00106
ORF1ab/nsp12572H572HcaTcaC11P.1.70.000319