CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 560 & Codon = ---

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12560V560delV4952deldelGTC---2424115118-15120

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12560V560delGTC---2424All0.000005
ORF1ab/nsp12560V560delGTC---44B.1.1.70.000004
ORF1ab/nsp12560V560delGTC---33AY.430.000013
ORF1ab/nsp12560V560delGTC---22AY.250.000012
ORF1ab/nsp12560V560delGTC---22AY.40.000003
ORF1ab/nsp12560V560delGTC---22P.10.000032
ORF1ab/nsp12560V560delGTC---11AY.420.00004
ORF1ab/nsp12560V560delGTC---11AY.440.000006
ORF1ab/nsp12560V560delGTC---11AY.590.00053
ORF1ab/nsp12560V560delGTC---11AY.840.000437
ORF1ab/nsp12560V560delGTC---11B.1.10.000018
ORF1ab/nsp12560V560delGTC---11B.1.1.1390.022727
ORF1ab/nsp12560V560delGTC---11B.1.160.230.004831
ORF1ab/nsp12560V560delGTC---11B.1.177.540.000606
ORF1ab/nsp12560V560delGTC---11B.1.177.680.015152
ORF1ab/nsp12560V560delGTC---11P.1.40.000977
ORF1ab/nsp12560V560delGTC---11Q.20.000613