CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 558 & Codon = gTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12558A558VA4950VnonsyngCtgTt25240.9615112-15114

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12558A558VgCtgTt2425All0.000005
ORF1ab/nsp12558A558VgCtgTt66D.20.00045
ORF1ab/nsp12558A558VgCtgTt330.166667
ORF1ab/nsp12558A558VgCtgTt33B.10.000027
ORF1ab/nsp12558A558VgCtgTt33B.1.10.000054
ORF1ab/nsp12558A558VgCtgTt11AY.1030.000006
ORF1ab/nsp12558A558VgCtgTt11AY.200.000039
ORF1ab/nsp12558A558VgCtgTt11AY.390.000025
ORF1ab/nsp12558A558VgCtgTt11B.1.1.250.000569
ORF1ab/nsp12558A558VgCtgTt11B.1.1.70.000001
ORF1ab/nsp12558A558VgCtgTt11B.1.160.160.000929
ORF1ab/nsp12558A558VgCtgTt11B.1.177.90.001332
ORF1ab/nsp12558A558VgCtgTt11B.1.2430.00007
ORF1ab/nsp12558A558VgCtgTt11B.1.617.20.000004