CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 558 & Codon = ---

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12558A558delA4950deldelGCT---3535115112-15114

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12558A558delGCT---3535All0.000007
ORF1ab/nsp12558A558delGCT---1010B.1.1.70.000009
ORF1ab/nsp12558A558delGCT---55AY.250.00003
ORF1ab/nsp12558A558delGCT---33AY.430.000013
ORF1ab/nsp12558A558delGCT---22AY.40.000003
ORF1ab/nsp12558A558delGCT---22P.10.000032
ORF1ab/nsp12558A558delGCT---11AY.30.00001
ORF1ab/nsp12558A558delGCT---11AY.420.00004
ORF1ab/nsp12558A558delGCT---11AY.590.00053
ORF1ab/nsp12558A558delGCT---11AY.650.000533
ORF1ab/nsp12558A558delGCT---11AY.840.000437
ORF1ab/nsp12558A558delGCT---11B.1.10.000018
ORF1ab/nsp12558A558delGCT---11B.1.1.1390.022727
ORF1ab/nsp12558A558delGCT---11B.1.160.230.004831
ORF1ab/nsp12558A558delGCT---11B.1.177.540.000606
ORF1ab/nsp12558A558delGCT---11B.1.177.680.015152
ORF1ab/nsp12558A558delGCT---11B.1.20.000009
ORF1ab/nsp12558A558delGCT---11P.1.40.000977
ORF1ab/nsp12558A558delGCT---11Q.20.000613