CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 499 & Codon = gaA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12499D499ED4891EnonsyngaCgaA85840.98823514935-14937

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12499D499EgaCgaA8485All0.000016
ORF1ab/nsp12499D499EgaCgaA1717B.1.617.20.000064
ORF1ab/nsp12499D499EgaCgaA1212B.1.1.70.000011
ORF1ab/nsp12499D499EgaCgaA66AY.40.000009
ORF1ab/nsp12499D499EgaCgaA55B.1.10.000091
ORF1ab/nsp12499D499EgaCgaA440.222222
ORF1ab/nsp12499D499EgaCgaA44AY.1190.000141
ORF1ab/nsp12499D499EgaCgaA44B.10.000037
ORF1ab/nsp12499D499EgaCgaA33AY.30.00003
ORF1ab/nsp12499D499EgaCgaA33B.1.2360.00616
ORF1ab/nsp12499D499EgaCgaA33P.10.000047
ORF1ab/nsp12499D499EgaCgaA22AY.1140.000462
ORF1ab/nsp12499D499EgaCgaA22B.1.1.5190.000079
ORF1ab/nsp12499D499EgaCgaA22B.1.1770.000026
ORF1ab/nsp12499D499EgaCgaA22P.20.000373
ORF1ab/nsp12499D499EgaCgaA11AD.20.000219
ORF1ab/nsp12499D499EgaCgaA11AY.1000.000046
ORF1ab/nsp12499D499EgaCgaA11AY.1180.000063
ORF1ab/nsp12499D499EgaCgaA11AY.250.000006
ORF1ab/nsp12499D499EgaCgaA11AY.340.000097
ORF1ab/nsp12499D499EgaCgaA11AY.440.000006
ORF1ab/nsp12499D499EgaCgaA11AY.700.000209
ORF1ab/nsp12499D499EgaCgaA11AY.99.20.000092
ORF1ab/nsp12499D499EgaCgaA11B.1.1100.004525
ORF1ab/nsp12499D499EgaCgaA11B.1.20.000009
ORF1ab/nsp12499D499EgaCgaA11B.1.2210.000071
ORF1ab/nsp12499D499EgaCgaA11B.1.4270.00005
ORF1ab/nsp12499D499EgaCgaA11B.1.5650.00081
ORF1ab/nsp12499D499EgaCgaA11B.1.5750.000303
ORF1ab/nsp12499D499EgaCgaA11D.20.000075