CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 481

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12481D481AD4873AnonsyngAtgCt90189018114881-14883
ORF1ab/nsp12481D481DD4873DsyngaTgaC502502114881-14883
ORF1ab/nsp12481D481GD4873GnonsyngAtgGt304304114881-14883
ORF1ab/nsp12481D481ND4873NnonsynGatAat8686114881-14883
ORF1ab/nsp12481D481ED4873EnonsyngaTgaG40350.87514881-14883
ORF1ab/nsp12481D481ED4873EnonsyngaTgaA4050.12514881-14883
ORF1ab/nsp12481D481YD4873YnonsynGatTat3232114881-14883
ORF1ab/nsp12481D481delD4873deldelGAT---2525114881-14883
ORF1ab/nsp12481D481VD4873VnonsyngAtgTt14130.92857114881-14883
ORF1ab/nsp12481D481VD4873VnonsyngATgTA1410.071428614881-14883
ORF1ab/nsp12481D481del2D4873del2delgATg--650.83333314881-14883
ORF1ab/nsp12481D481del2D4873del2delGAt--t610.16666714881-14883
ORF1ab/nsp12481D481XD4873XnonsynGaTTaA22114881-14883
ORF1ab/nsp12481D481FD4873FnonsynGAtTTt11114881-14883
ORF1ab/nsp12481D481LD4873LnonsynGATTTA11114881-14883
ORF1ab/nsp12481D481del1D4873del1delgaTga-11114881-14883
ORF1ab/nsp12481D481ID4873InonsynGAtATt11114881-14883

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12481D481AgAtgCt90189018All0.001725
ORF1ab/nsp12481D481AgAtgCt87568756AY.4.50.941202
ORF1ab/nsp12481D481DgaTgaC502502All0.000096
ORF1ab/nsp12481D481DgaTgaC354354AY.3.10.030182
ORF1ab/nsp12481D481GgAtgGt304304All0.000058
ORF1ab/nsp12481D481AgAtgCt211211AY.40.000328
ORF1ab/nsp12481D481GgAtgGt132132B.1.1.70.000118
ORF1ab/nsp12481D481DgaTgaC8787B.1.1.70.000078
ORF1ab/nsp12481D481NGatAat8686All0.000016
ORF1ab/nsp12481D481NGatAat7272B.1.1.70.000064
ORF1ab/nsp12481D481EgaTgaG3540All0.000007
ORF1ab/nsp12481D481EgaTgaA540All0.000001
ORF1ab/nsp12481D481YGatTat3232All0.000006
ORF1ab/nsp12481D481delGAT---2525All0.000005
ORF1ab/nsp12481D481DgaTgaC2525B.1.1.5190.000993
ORF1ab/nsp12481D481EgaTgaG2424B.1.1.70.000021
ORF1ab/nsp12481D481GgAtgGt2323AY.4.50.002472
ORF1ab/nsp12481D481GgAtgGt1717B.1.10.000308
ORF1ab/nsp12481D481GgAtgGt1515B.1.4270.000757
ORF1ab/nsp12481D481VgAtgTt1314All0.000002
ORF1ab/nsp12481D481VgATgTA114All0
ORF1ab/nsp12481D481GgAtgGt1414AY.30.000139
ORF1ab/nsp12481D481GgAtgGt1313AY.1030.000081
ORF1ab/nsp12481D481GgAtgGt1212B.10.00011
ORF1ab/nsp12481D481delGAT---1010B.1.1.70.000009
ORF1ab/nsp12481D481GgAtgGt99B.1.1110.010576
ORF1ab/nsp12481D481AgAtgCt99B.1.617.20.000034
ORF1ab/nsp12481D481AgAtgCt77AY.390.000173
ORF1ab/nsp12481D481AgAtgCt77AY.430.000031
ORF1ab/nsp12481D481AgAtgCt77B.1.1.70.000006
ORF1ab/nsp12481D481YGatTat77B.1.20.000062
ORF1ab/nsp12481D481del2gATg--56All0.000001
ORF1ab/nsp12481D481del2GAt--t16All0
ORF1ab/nsp12481D481GgAtgGt66B.1.177.210.000459
ORF1ab/nsp12481D481DgaTgaC55AY.200.000194
ORF1ab/nsp12481D481GgAtgGt55AY.250.00003
ORF1ab/nsp12481D481NGatAat55AY.30.00005
ORF1ab/nsp12481D481VgAtgTt55AY.4.50.000537
ORF1ab/nsp12481D481YGatTat440.222222
ORF1ab/nsp12481D481GgAtgGt44AY.390.000099
ORF1ab/nsp12481D481DgaTgaC44AY.430.000018
ORF1ab/nsp12481D481YGatTat44AY.440.000024
ORF1ab/nsp12481D481EgaTgaG44B.1.1770.000053
ORF1ab/nsp12481D481EgaTgaG44B.1.258.170.000416
ORF1ab/nsp12481D481EgaTgaA330.166667
ORF1ab/nsp12481D481DgaTgaC33AY.40.000005
ORF1ab/nsp12481D481GgAtgGt33AY.410.000882
ORF1ab/nsp12481D481GgAtgGt33AY.440.000018
ORF1ab/nsp12481D481AgAtgCt33AY.450.000365
ORF1ab/nsp12481D481DgaTgaC33B.1.1.500.002037
ORF1ab/nsp12481D481delGAT---33B.1.1770.00004
ORF1ab/nsp12481D481XGaTTaA220.111111
ORF1ab/nsp12481D481VgATgTA120.055556
ORF1ab/nsp12481D481VgAtgTt120.055556
ORF1ab/nsp12481D481GgAtgGt22A.10.000564
ORF1ab/nsp12481D481XGaTTaA22All0
ORF1ab/nsp12481D481DgaTgaC22AY.1170.000169
ORF1ab/nsp12481D481AgAtgCt22AY.1170.000169
ORF1ab/nsp12481D481GgAtgGt22AY.140.000176
ORF1ab/nsp12481D481AgAtgCt22AY.230.000139
ORF1ab/nsp12481D481DgaTgaC22AY.30.00002
ORF1ab/nsp12481D481YGatTat22AY.40.000003
ORF1ab/nsp12481D481AgAtgCt22AY.420.00008
ORF1ab/nsp12481D481YGatTat22AY.420.00008
ORF1ab/nsp12481D481AgAtgCt22AY.440.000012
ORF1ab/nsp12481D481GgAtgGt22AY.470.000062
ORF1ab/nsp12481D481GgAtgGt22AY.680.000547
ORF1ab/nsp12481D481VgAtgTt22AY.800.002257
ORF1ab/nsp12481D481DgaTgaC22AY.90.000135
ORF1ab/nsp12481D481YGatTat22B.10.000018
ORF1ab/nsp12481D481DgaTgaC22B.10.000018
ORF1ab/nsp12481D481GgAtgGt22B.1.1.3220.017544
ORF1ab/nsp12481D481del2gATg--22B.1.1.70.000002
ORF1ab/nsp12481D481VgAtgTt22B.1.1.70.000002
ORF1ab/nsp12481D481GgAtgGt22B.1.20.000018
ORF1ab/nsp12481D481GgAtgGt22B.1.2580.000133
ORF1ab/nsp12481D481GgAtgGt22B.1.5250.000226
ORF1ab/nsp12481D481GgAtgGt22B.1.617.20.000008
ORF1ab/nsp12481D481GgAtgGt22B.1.6370.000146
ORF1ab/nsp12481D481GgAtgGt22P.10.000032
ORF1ab/nsp12481D481FGAtTTt110.055556
ORF1ab/nsp12481D481LGATTTA110.055556
ORF1ab/nsp12481D481YGatTat11A0.000387
ORF1ab/nsp12481D481GgAtgGt11A.2.40.003367
ORF1ab/nsp12481D481GgAtgGt11A.2.50.000499
ORF1ab/nsp12481D481YGatTat11A.50.001923
ORF1ab/nsp12481D481del1gaTga-11All0
ORF1ab/nsp12481D481LGATTTA11All0
ORF1ab/nsp12481D481FGAtTTt11All0
ORF1ab/nsp12481D481IGAtATt11All0
ORF1ab/nsp12481D481GgAtgGt11AY.1000.000046
ORF1ab/nsp12481D481DgaTgaC11AY.1020.000027
ORF1ab/nsp12481D481NGatAat11AY.1030.000006
ORF1ab/nsp12481D481NGatAat11AY.1170.000085
ORF1ab/nsp12481D481AgAtgCt11AY.1190.000035
ORF1ab/nsp12481D481DgaTgaC11AY.1190.000035
ORF1ab/nsp12481D481NGatAat11AY.1200.000037
ORF1ab/nsp12481D481DgaTgaC11AY.1200.000037
ORF1ab/nsp12481D481VgAtgTt11AY.1210.000135
ORF1ab/nsp12481D481NGatAat11AY.140.000088
ORF1ab/nsp12481D481GgAtgGt11AY.190.00114
ORF1ab/nsp12481D481AgAtgCt11AY.200.000039
ORF1ab/nsp12481D481NGatAat11AY.200.000039
ORF1ab/nsp12481D481VgAtgTt11AY.250.000006
ORF1ab/nsp12481D481delGAT---11AY.250.000006
ORF1ab/nsp12481D481DgaTgaC11AY.250.000006
ORF1ab/nsp12481D481GgAtgGt11AY.260.000028
ORF1ab/nsp12481D481GgAtgGt11AY.270.000065
ORF1ab/nsp12481D481NGatAat11AY.3.10.000085
ORF1ab/nsp12481D481GgAtgGt11AY.360.000148
ORF1ab/nsp12481D481DgaTgaC11AY.390.000025
ORF1ab/nsp12481D481YGatTat11AY.390.000025
ORF1ab/nsp12481D481NGatAat11AY.390.000025
ORF1ab/nsp12481D481GgAtgGt11AY.40.000002
ORF1ab/nsp12481D481NGatAat11AY.4.20.000022
ORF1ab/nsp12481D481AgAtgCt11AY.4.20.000022
ORF1ab/nsp12481D481AgAtgCt11AY.4.30.000842
ORF1ab/nsp12481D481del2gATg--11AY.4.50.000107
ORF1ab/nsp12481D481delGAT---11AY.4.50.000107
ORF1ab/nsp12481D481delGAT---11AY.430.000004
ORF1ab/nsp12481D481GgAtgGt11AY.430.000004
ORF1ab/nsp12481D481VgAtgTt11AY.430.000004
ORF1ab/nsp12481D481GgAtgGt11AY.450.000122
ORF1ab/nsp12481D481GgAtgGt11AY.50.000021
ORF1ab/nsp12481D481GgAtgGt11AY.630.000387
ORF1ab/nsp12481D481AgAtgCt11AY.640.000595
ORF1ab/nsp12481D481GgAtgGt11AY.670.000464
ORF1ab/nsp12481D481AgAtgCt11AY.690.000187
ORF1ab/nsp12481D481DgaTgaC11AY.750.000056
ORF1ab/nsp12481D481GgAtgGt11AY.9.20.000037
ORF1ab/nsp12481D481YGatTat11AY.9.20.000037
ORF1ab/nsp12481D481AgAtgCt11AY.950.000761
ORF1ab/nsp12481D481AgAtgCt11AY.98.10.000048
ORF1ab/nsp12481D481GgAtgGt11AY.98.10.000048
ORF1ab/nsp12481D481YGatTat11AY.990.001049
ORF1ab/nsp12481D481delGAT---11AY.99.10.001553
ORF1ab/nsp12481D481YGatTat11B0.000128
ORF1ab/nsp12481D481DgaTgaC11B0.000128
ORF1ab/nsp12481D481delGAT---11B.10.000009
ORF1ab/nsp12481D481delGAT---11B.1.10.000018
ORF1ab/nsp12481D481DgaTgaC11B.1.10.000018
ORF1ab/nsp12481D481EgaTgaG11B.1.10.000018
ORF1ab/nsp12481D481delGAT---11B.1.1.1390.022727
ORF1ab/nsp12481D481GgAtgGt11B.1.1.1920.002309
ORF1ab/nsp12481D481DgaTgaC11B.1.1.2210.010101
ORF1ab/nsp12481D481GgAtgGt11B.1.1.2220.000204
ORF1ab/nsp12481D481YGatTat11B.1.1.2940.001266
ORF1ab/nsp12481D481delGAT---11B.1.1.3060.000438
ORF1ab/nsp12481D481DgaTgaC11B.1.1.3060.000438
ORF1ab/nsp12481D481YGatTat11B.1.1.390.00051
ORF1ab/nsp12481D481GgAtgGt11B.1.1.4340.000349
ORF1ab/nsp12481D481EgaTgaA11B.1.1.500.000679
ORF1ab/nsp12481D481YGatTat11B.1.1.70.000001
ORF1ab/nsp12481D481del1gaTga-11B.1.1.70.000001
ORF1ab/nsp12481D481AgAtgCt11B.1.1600.000031
ORF1ab/nsp12481D481delGAT---11B.1.160.230.004831
ORF1ab/nsp12481D481YGatTat11B.1.1770.000013
ORF1ab/nsp12481D481GgAtgGt11B.1.177.580.001332
ORF1ab/nsp12481D481NGatAat11B.1.177.650.000665
ORF1ab/nsp12481D481delGAT---11B.1.177.810.000189
ORF1ab/nsp12481D481del2GAt--t11B.1.20.000009
ORF1ab/nsp12481D481AgAtgCt11B.1.2180.005155
ORF1ab/nsp12481D481EgaTgaA11B.1.2210.000071
ORF1ab/nsp12481D481delGAT---11B.1.2580.000067
ORF1ab/nsp12481D481YGatTat11B.1.3010.005917
ORF1ab/nsp12481D481GgAtgGt11B.1.3490.000715
ORF1ab/nsp12481D481EgaTgaG11B.1.3510.00003
ORF1ab/nsp12481D481GgAtgGt11B.1.3510.00003
ORF1ab/nsp12481D481GgAtgGt11B.1.360.000146
ORF1ab/nsp12481D481IGAtATt11B.1.3770.004566
ORF1ab/nsp12481D481GgAtgGt11B.1.5260.000024
ORF1ab/nsp12481D481del2gATg--11B.1.5610.000397
ORF1ab/nsp12481D481DgaTgaC11B.1.617.20.000004
ORF1ab/nsp12481D481delGAT---11B.1.617.20.000004
ORF1ab/nsp12481D481del2gATg--11B.340.013699
ORF1ab/nsp12481D481DgaTgaC11C.350.000774
ORF1ab/nsp12481D481EgaTgaG11P.10.000016
ORF1ab/nsp12481D481GgAtgGt11P.1.120.000484
ORF1ab/nsp12481D481GgAtgGt11P.20.000187
ORF1ab/nsp12481D481DgaTgaC11Q.10.000126
ORF1ab/nsp12481D481GgAtgGt11Q.10.000126