CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 451

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12451S451SS4843SsynagCagT15131513114791-14793
ORF1ab/nsp12451S451IS4843InonsynaGcaTc490490114791-14793
ORF1ab/nsp12451S451CS4843CnonsynAgcTgc374374114791-14793
ORF1ab/nsp12451S451RS4843RnonsynagCagA2282060.90350914791-14793
ORF1ab/nsp12451S451RS4843RnonsynAgcCgc228180.078947414791-14793
ORF1ab/nsp12451S451RS4843RnonsynagCagG22840.017543914791-14793
ORF1ab/nsp12451S451GS4843GnonsynAgcGgc9494114791-14793
ORF1ab/nsp12451S451NS4843NnonsynaGcaAc8484114791-14793
ORF1ab/nsp12451S451delS4843deldelAGC---5353114791-14793
ORF1ab/nsp12451S451del2S4843del2delaGCa--46450.97826114791-14793
ORF1ab/nsp12451S451del2S4843del2delAGc--c4610.021739114791-14793
ORF1ab/nsp12451S451del1S4843del1delagCag-31260.8387114791-14793
ORF1ab/nsp12451S451del1S4843del1delaGca-c3130.096774214791-14793
ORF1ab/nsp12451S451del1S4843del1delaGCa-N3110.032258114791-14793
ORF1ab/nsp12451S451del1S4843del1delAgc-gc3110.032258114791-14793
ORF1ab/nsp12451S451TS4843TnonsynaGcaCc430.7514791-14793
ORF1ab/nsp12451S451TS4843TnonsynaGCaCT410.2514791-14793
ORF1ab/nsp12451S451KS4843KnonsynaGCaAA11114791-14793
ORF1ab/nsp12451S451WS4843WnonsynAgCTgG11114791-14793

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12451S451SagCagT15131513All0.000289
ORF1ab/nsp12451S451IaGcaTc490490All0.000094
ORF1ab/nsp12451S451SagCagT454454B.1.1.70.000406
ORF1ab/nsp12451S451CAgcTgc374374All0.000072
ORF1ab/nsp12451S451CAgcTgc242242AY.99.20.022302
ORF1ab/nsp12451S451RagCagA206228All0.000039
ORF1ab/nsp12451S451RAgcCgc18228All0.000003
ORF1ab/nsp12451S451RagCagG4228All0.000001
ORF1ab/nsp12451S451IaGcaTc200200B.1.1.2530.501253
ORF1ab/nsp12451S451SagCagT180180AY.40.00028
ORF1ab/nsp12451S451RagCagA155155B.1.2430.010786
ORF1ab/nsp12451S451IaGcaTc111111B.1.1.70.000099
ORF1ab/nsp12451S451GAgcGgc9494All0.000018
ORF1ab/nsp12451S451SagCagT8585B.10.000779
ORF1ab/nsp12451S451NaGcaAc8484All0.000016
ORF1ab/nsp12451S451SagCagT6969AY.1030.000428
ORF1ab/nsp12451S451IaGcaTc6464AY.260.001812
ORF1ab/nsp12451S451CAgcTgc5959B.1.1.450.830986
ORF1ab/nsp12451S451GAgcGgc5858AY.430.000257
ORF1ab/nsp12451S451delAGC---5353All0.00001
ORF1ab/nsp12451S451SagCagT4949B.1.10.000889
ORF1ab/nsp12451S451del2aGCa--4546All0.000009
ORF1ab/nsp12451S451del2AGc--c146All0
ORF1ab/nsp12451S451SagCagT4444B.1.617.20.000166
ORF1ab/nsp12451S451CAgcTgc4040B.1.1.70.000036
ORF1ab/nsp12451S451SagCagT3737AY.360.005484
ORF1ab/nsp12451S451SagCagT3535AY.430.000155
ORF1ab/nsp12451S451SagCagT3434B.1.20.000299
ORF1ab/nsp12451S451del2aGCa--3233B.1.1.70.000029
ORF1ab/nsp12451S451del2AGc--c133B.1.1.70.000001
ORF1ab/nsp12451S451del1agCag-2631All0.000005
ORF1ab/nsp12451S451del1aGca-c331All0.000001
ORF1ab/nsp12451S451del1aGCa-N131All0
ORF1ab/nsp12451S451del1Agc-gc131All0
ORF1ab/nsp12451S451SagCagT3030B.1.4290.000706
ORF1ab/nsp12451S451del1agCag-2529B.1.1.70.000022
ORF1ab/nsp12451S451del1aGca-c329B.1.1.70.000003
ORF1ab/nsp12451S451del1aGCa-N129B.1.1.70.000001
ORF1ab/nsp12451S451delAGC---2626B.1.1.70.000023
ORF1ab/nsp12451S451SagCagT2626C.36.30.014748
ORF1ab/nsp12451S451IaGcaTc2222AY.430.000097
ORF1ab/nsp12451S451SagCagT2121P.10.000331
ORF1ab/nsp12451S451SagCagT2020B.1.1.2030.338983
ORF1ab/nsp12451S451IaGcaTc1919AY.40.00003
ORF1ab/nsp12451S451RagCagA1718AY.40.000026
ORF1ab/nsp12451S451RAgcCgc118AY.40.000002
ORF1ab/nsp12451S451SagCagT1818B.1.1770.000237
ORF1ab/nsp12451S451RagCagA1317B.1.1.70.000012
ORF1ab/nsp12451S451RAgcCgc417B.1.1.70.000004
ORF1ab/nsp12451S451SagCagT1717B.1.5260.0004
ORF1ab/nsp12451S451SagCagT1515AY.390.000371
ORF1ab/nsp12451S451SagCagT1515AY.9.10.001256
ORF1ab/nsp12451S451SagCagT1515AY.9.20.000551
ORF1ab/nsp12451S451SagCagT1414B.1.177.600.003058
ORF1ab/nsp12451S451SagCagT1414B.1.2430.000974
ORF1ab/nsp12451S451SagCagT1313AY.250.000078
ORF1ab/nsp12451S451SagCagT1313AY.260.000368
ORF1ab/nsp12451S451SagCagT1313AY.440.000079
ORF1ab/nsp12451S451NaGcaAc1313B.1.438.10.001394
ORF1ab/nsp12451S451SagCagT1212AY.4.20.00026
ORF1ab/nsp12451S451NaGcaAc1212AY.750.000672
ORF1ab/nsp12451S451SagCagT1212B.1.3510.000357
ORF1ab/nsp12451S451GAgcGgc1111AY.1030.000068
ORF1ab/nsp12451S451SagCagT1111B.1.2580.000732
ORF1ab/nsp12451S451SagCagT1010AY.130.00161
ORF1ab/nsp12451S451CAgcTgc1010B.10.000092
ORF1ab/nsp12451S451SagCagT1010B.1.1.3500.4
ORF1ab/nsp12451S451SagCagT99AY.1020.000239
ORF1ab/nsp12451S451NaGcaAc99AY.450.001095
ORF1ab/nsp12451S451SagCagT88B.1.1.2910.005939
ORF1ab/nsp12451S451NaGcaAc88B.1.1.70.000007
ORF1ab/nsp12451S451SagCagT88B.1.2340.001056
ORF1ab/nsp12451S451IaGcaTc88B.1.2580.000532
ORF1ab/nsp12451S451SagCagT88B.1.4270.000404
ORF1ab/nsp12451S451IaGcaTc88B.1.617.20.00003
ORF1ab/nsp12451S451IaGcaTc77AY.250.000042
ORF1ab/nsp12451S451GAgcGgc77B.1.1.70.000006
ORF1ab/nsp12451S451CAgcTgc77B.1.617.20.000026
ORF1ab/nsp12451S451SagCagT77Q.10.000884
ORF1ab/nsp12451S451SagCagT66AY.1000.000276
ORF1ab/nsp12451S451SagCagT66AY.1180.000376
ORF1ab/nsp12451S451IaGcaTc66AY.1190.000212
ORF1ab/nsp12451S451SagCagT66AY.290.000095
ORF1ab/nsp12451S451IaGcaTc66AY.390.000148
ORF1ab/nsp12451S451IaGcaTc66B.10.000055
ORF1ab/nsp12451S451RagCagA46B.10.000037
ORF1ab/nsp12451S451RagCagG16B.10.000009
ORF1ab/nsp12451S451RAgcCgc16B.10.000009
ORF1ab/nsp12451S451SagCagT55AY.1190.000177
ORF1ab/nsp12451S451SagCagT55AY.420.000201
ORF1ab/nsp12451S451SagCagT55AY.60.000206
ORF1ab/nsp12451S451NaGcaAc55B.1.1.3180.001509
ORF1ab/nsp12451S451SagCagT55B.1.1.3480.003981
ORF1ab/nsp12451S451SagCagT55B.1.177.50.006211
ORF1ab/nsp12451S451NaGcaAc55B.1.3510.000149
ORF1ab/nsp12451S451SagCagT55B.1.36.290.002587
ORF1ab/nsp12451S451SagCagT55B.1.6210.000443
ORF1ab/nsp12451S451IaGcaTc55B.1.6210.000443
ORF1ab/nsp12451S451SagCagT55C.10.011962
ORF1ab/nsp12451S451SagCagT55Q.30.000725
ORF1ab/nsp12451S451SagCagT44A.290.021277
ORF1ab/nsp12451S451TaGcaCc34All0.000001
ORF1ab/nsp12451S451TaGCaCT14All0
ORF1ab/nsp12451S451CAgcTgc44AY.1030.000025
ORF1ab/nsp12451S451SagCagT44AY.120.2.10.001993
ORF1ab/nsp12451S451SagCagT44AY.200.000155
ORF1ab/nsp12451S451SagCagT44AY.30.00004
ORF1ab/nsp12451S451NaGcaAc44AY.40.000006
ORF1ab/nsp12451S451SagCagT44AY.650.002132
ORF1ab/nsp12451S451delAGC---44B.1.1770.000053
ORF1ab/nsp12451S451IaGcaTc44B.1.1770.000053
ORF1ab/nsp12451S451RAgcCgc44B.1.351.50.002398
ORF1ab/nsp12451S451SagCagT44P.1.10.001271
ORF1ab/nsp12451S451RAgcCgc23AY.250.000012
ORF1ab/nsp12451S451RagCagA13AY.250.000006
ORF1ab/nsp12451S451NaGcaAc33AY.30.00003
ORF1ab/nsp12451S451IaGcaTc33AY.30.00003
ORF1ab/nsp12451S451IaGcaTc33AY.3.10.000256
ORF1ab/nsp12451S451delAGC---33AY.40.000005
ORF1ab/nsp12451S451SagCagT33AY.550.002752
ORF1ab/nsp12451S451RagCagA33B.1.1.4860.004732
ORF1ab/nsp12451S451SagCagT33B.1.1110.003525
ORF1ab/nsp12451S451SagCagT33B.1.177.810.000568
ORF1ab/nsp12451S451del2aGCa--33B.1.177.820.001432
ORF1ab/nsp12451S451SagCagT33B.1.2390.003663
ORF1ab/nsp12451S451SagCagT33B.1.3110.000824
ORF1ab/nsp12451S451del2aGCa--33B.1.3510.000089
ORF1ab/nsp12451S451NaGcaAc33B.1.4270.000151
ORF1ab/nsp12451S451delAGC---33B.1.617.20.000011
ORF1ab/nsp12451S451GAgcGgc22A0.000774
ORF1ab/nsp12451S451GAgcGgc22A.23.10.001408
ORF1ab/nsp12451S451SagCagT22AE.80.000978
ORF1ab/nsp12451S451CAgcTgc22AY.1020.000053
ORF1ab/nsp12451S451SagCagT22AY.1170.000169
ORF1ab/nsp12451S451GAgcGgc22AY.250.000012
ORF1ab/nsp12451S451GAgcGgc22AY.290.000032
ORF1ab/nsp12451S451RagCagA22AY.340.000194
ORF1ab/nsp12451S451delAGC---22AY.4.50.000215
ORF1ab/nsp12451S451SagCagT22AY.50.000041
ORF1ab/nsp12451S451SagCagT22AY.5.30.000675
ORF1ab/nsp12451S451del2aGCa--22AY.520.001629
ORF1ab/nsp12451S451RagCagG22AY.660.002139
ORF1ab/nsp12451S451SagCagT22AY.850.000854
ORF1ab/nsp12451S451IaGcaTc22B.1.10.000036
ORF1ab/nsp12451S451SagCagT22B.1.1.2140.000111
ORF1ab/nsp12451S451SagCagT22B.1.1.330.000842
ORF1ab/nsp12451S451SagCagT22B.1.1.5190.000079
ORF1ab/nsp12451S451SagCagT22B.1.1600.000062
ORF1ab/nsp12451S451del2aGCa--22B.1.1600.000062
ORF1ab/nsp12451S451SagCagT22B.1.177.870.001456
ORF1ab/nsp12451S451RagCagA12B.1.20.000009
ORF1ab/nsp12451S451RagCagG12B.1.20.000009
ORF1ab/nsp12451S451CAgcTgc22B.1.2060.001631
ORF1ab/nsp12451S451IaGcaTc22B.1.2210.000142
ORF1ab/nsp12451S451SagCagT22B.1.360.000292
ORF1ab/nsp12451S451SagCagT22B.1.36.180.00084
ORF1ab/nsp12451S451GAgcGgc22B.1.4290.000047
ORF1ab/nsp12451S451SagCagT22B.1.4330.00639
ORF1ab/nsp12451S451NaGcaAc22B.1.5260.000047
ORF1ab/nsp12451S451SagCagT22B.1.617.10.000258
ORF1ab/nsp12451S451NaGcaAc22B.1.617.20.000008
ORF1ab/nsp12451S451RAgcCgc22B.1.617.20.000008
ORF1ab/nsp12451S451SagCagT22P.1.140.000096
ORF1ab/nsp12451S451SagCagT22P.1.150.000465
ORF1ab/nsp12451S451SagCagT22P.20.000373
ORF1ab/nsp12451S451NaGcaAc110.055556
ORF1ab/nsp12451S451SagCagT11A.10.000282
ORF1ab/nsp12451S451SagCagT11AD.20.000219
ORF1ab/nsp12451S451WAgCTgG11All0
ORF1ab/nsp12451S451KaGCaAA11All0
ORF1ab/nsp12451S451IaGcaTc11AY.1020.000027
ORF1ab/nsp12451S451RagCagA11AY.1020.000027
ORF1ab/nsp12451S451NaGcaAc11AY.1030.000006
ORF1ab/nsp12451S451IaGcaTc11AY.1030.000006
ORF1ab/nsp12451S451RagCagA11AY.1030.000006
ORF1ab/nsp12451S451SagCagT11AY.1090.00074
ORF1ab/nsp12451S451SagCagT11AY.1100.000113
ORF1ab/nsp12451S451SagCagT11AY.1110.000183
ORF1ab/nsp12451S451SagCagT11AY.1130.000142
ORF1ab/nsp12451S451SagCagT11AY.1160.000287
ORF1ab/nsp12451S451RAgcCgc11AY.1190.000035
ORF1ab/nsp12451S451SagCagT11AY.1200.000037
ORF1ab/nsp12451S451SagCagT11AY.16.10.00047
ORF1ab/nsp12451S451GAgcGgc11AY.200.000039
ORF1ab/nsp12451S451SagCagT11AY.230.00007
ORF1ab/nsp12451S451NaGcaAc11AY.250.000006
ORF1ab/nsp12451S451CAgcTgc11AY.250.000006
ORF1ab/nsp12451S451GAgcGgc11AY.260.000028
ORF1ab/nsp12451S451SagCagT11AY.270.000065
ORF1ab/nsp12451S451TaGCaCT11AY.30.00001
ORF1ab/nsp12451S451GAgcGgc11AY.30.00001
ORF1ab/nsp12451S451SagCagT11AY.300.000396
ORF1ab/nsp12451S451NaGcaAc11AY.300.000396
ORF1ab/nsp12451S451SagCagT11AY.330.000067
ORF1ab/nsp12451S451CAgcTgc11AY.330.000067
ORF1ab/nsp12451S451delAGC---11AY.360.000148
ORF1ab/nsp12451S451NaGcaAc11AY.390.000025
ORF1ab/nsp12451S451TaGcaCc11AY.39.10.00004
ORF1ab/nsp12451S451SagCagT11AY.39.10.00004
ORF1ab/nsp12451S451CAgcTgc11AY.40.000002
ORF1ab/nsp12451S451GAgcGgc11AY.4.20.000022
ORF1ab/nsp12451S451delAGC---11AY.430.000004
ORF1ab/nsp12451S451CAgcTgc11AY.430.000004
ORF1ab/nsp12451S451NaGcaAc11AY.430.000004
ORF1ab/nsp12451S451TaGcaCc11AY.440.000006
ORF1ab/nsp12451S451SagCagT11AY.450.000122
ORF1ab/nsp12451S451SagCagT11AY.460.000104
ORF1ab/nsp12451S451NaGcaAc11AY.470.000031
ORF1ab/nsp12451S451RagCagA11AY.470.000031
ORF1ab/nsp12451S451delAGC---11AY.520.000814
ORF1ab/nsp12451S451SagCagT11AY.530.000288
ORF1ab/nsp12451S451SagCagT11AY.540.000095
ORF1ab/nsp12451S451SagCagT11AY.590.00053
ORF1ab/nsp12451S451IaGcaTc11AY.60.000041
ORF1ab/nsp12451S451SagCagT11AY.680.000274
ORF1ab/nsp12451S451SagCagT11AY.750.000056
ORF1ab/nsp12451S451IaGcaTc11AY.750.000056
ORF1ab/nsp12451S451WAgCTgG11AY.850.000427
ORF1ab/nsp12451S451GAgcGgc11AY.90.000068
ORF1ab/nsp12451S451SagCagT11AY.98.10.000048
ORF1ab/nsp12451S451IaGcaTc11AY.98.10.000048
ORF1ab/nsp12451S451delAGC---11B.10.000009
ORF1ab/nsp12451S451del1agCag-11B.10.000009
ORF1ab/nsp12451S451delAGC---11B.1.10.000018
ORF1ab/nsp12451S451CAgcTgc11B.1.10.000018
ORF1ab/nsp12451S451GAgcGgc11B.1.10.000018
ORF1ab/nsp12451S451TaGcaCc11B.1.10.000018
ORF1ab/nsp12451S451delAGC---11B.1.1.1390.022727
ORF1ab/nsp12451S451SagCagT11B.1.1.1810.004545
ORF1ab/nsp12451S451SagCagT11B.1.1.2200.001859
ORF1ab/nsp12451S451delAGC---11B.1.1.2360.006897
ORF1ab/nsp12451S451SagCagT11B.1.1.2410.00207
ORF1ab/nsp12451S451SagCagT11B.1.1.2430.004082
ORF1ab/nsp12451S451SagCagT11B.1.1.2690.001353
ORF1ab/nsp12451S451SagCagT11B.1.1.2890.002083
ORF1ab/nsp12451S451delAGC---11B.1.1.3060.000438
ORF1ab/nsp12451S451delAGC---11B.1.1.3110.000358
ORF1ab/nsp12451S451IaGcaTc11B.1.1.3150.008475
ORF1ab/nsp12451S451SagCagT11B.1.1.3160.000925
ORF1ab/nsp12451S451SagCagT11B.1.1.3170.000412
ORF1ab/nsp12451S451IaGcaTc11B.1.1.3690.000446
ORF1ab/nsp12451S451SagCagT11B.1.1.3720.000689
ORF1ab/nsp12451S451IaGcaTc11B.1.1.5190.00004
ORF1ab/nsp12451S451NaGcaAc11B.1.130.002375
ORF1ab/nsp12451S451SagCagT11B.1.1570.002985
ORF1ab/nsp12451S451NaGcaAc11B.1.1600.000031
ORF1ab/nsp12451S451NaGcaAc11B.1.160.220.006757
ORF1ab/nsp12451S451delAGC---11B.1.160.230.004831
ORF1ab/nsp12451S451KaGCaAA11B.1.1770.000013
ORF1ab/nsp12451S451delAGC---11B.1.177.180.00116
ORF1ab/nsp12451S451SagCagT11B.1.177.240.001295
ORF1ab/nsp12451S451delAGC---11B.1.177.40.000211
ORF1ab/nsp12451S451SagCagT11B.1.177.440.000519
ORF1ab/nsp12451S451delAGC---11B.1.177.510.004566
ORF1ab/nsp12451S451delAGC---11B.1.177.540.000606
ORF1ab/nsp12451S451SagCagT11B.1.177.570.000281
ORF1ab/nsp12451S451del2aGCa--11B.1.177.60.000977
ORF1ab/nsp12451S451SagCagT11B.1.177.820.000477
ORF1ab/nsp12451S451IaGcaTc11B.1.20.000009
ORF1ab/nsp12451S451NaGcaAc11B.1.20.000009
ORF1ab/nsp12451S451SagCagT11B.1.2100.002132
ORF1ab/nsp12451S451NaGcaAc11B.1.2340.000132
ORF1ab/nsp12451S451GAgcGgc11B.1.2430.00007
ORF1ab/nsp12451S451RagCagA11B.1.2580.000067
ORF1ab/nsp12451S451SagCagT11B.1.258.160.001637
ORF1ab/nsp12451S451SagCagT11B.1.258.170.000104
ORF1ab/nsp12451S451RagCagA11B.1.2650.001271
ORF1ab/nsp12451S451RagCagA11B.1.3200.001245
ORF1ab/nsp12451S451CAgcTgc11B.1.3510.00003
ORF1ab/nsp12451S451SagCagT11B.1.351.50.0006
ORF1ab/nsp12451S451NaGcaAc11B.1.360.000146
ORF1ab/nsp12451S451del2aGCa--11B.1.36.10.00114
ORF1ab/nsp12451S451delAGC---11B.1.36.170.000494
ORF1ab/nsp12451S451SagCagT11B.1.3670.000792
ORF1ab/nsp12451S451IaGcaTc11B.1.3910.001127
ORF1ab/nsp12451S451CAgcTgc11B.1.4270.00005
ORF1ab/nsp12451S451SagCagT11B.1.438.10.000107
ORF1ab/nsp12451S451NaGcaAc11B.1.5090.000866
ORF1ab/nsp12451S451SagCagT11B.1.5230.002451
ORF1ab/nsp12451S451del1Agc-gc11B.1.5250.000113
ORF1ab/nsp12451S451SagCagT11B.1.5610.000397
ORF1ab/nsp12451S451SagCagT11B.1.5700.002941
ORF1ab/nsp12451S451IaGcaTc11B.1.5800.004065
ORF1ab/nsp12451S451RAgcCgc11B.1.5820.000491
ORF1ab/nsp12451S451SagCagT11B.1.5870.001898
ORF1ab/nsp12451S451RagCagA11B.1.5880.00091
ORF1ab/nsp12451S451NaGcaAc11B.1.5950.000261
ORF1ab/nsp12451S451RagCagA11B.1.5960.000087
ORF1ab/nsp12451S451GAgcGgc11B.1.6000.005848
ORF1ab/nsp12451S451CAgcTgc11B.1.6060.006024
ORF1ab/nsp12451S451SagCagT11B.1.6230.000536
ORF1ab/nsp12451S451SagCagT11B.1.9.50.005682
ORF1ab/nsp12451S451SagCagT11C.1.10.076923
ORF1ab/nsp12451S451SagCagT11C.360.000911
ORF1ab/nsp12451S451IaGcaTc11C.36.30.000567
ORF1ab/nsp12451S451RAgcCgc11C.370.000116
ORF1ab/nsp12451S451NaGcaAc11C.370.000116
ORF1ab/nsp12451S451IaGcaTc11C.370.000116
ORF1ab/nsp12451S451SagCagT11C.370.000116
ORF1ab/nsp12451S451IaGcaTc11D.20.000075
ORF1ab/nsp12451S451RAgcCgc11P.10.000016
ORF1ab/nsp12451S451NaGcaAc11P.1.140.000048
ORF1ab/nsp12451S451RagCagA11P.1.140.000048
ORF1ab/nsp12451S451RagCagA11Q.10.000126
ORF1ab/nsp12451S451NaGcaAc11Q.10.000126
ORF1ab/nsp12451S451del2aGCa--11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.