CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 449 & Codon = Act

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12449A449TA4841TnonsynGctAct212212114785-14787

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12449A449TGctAct212212All0.000041
ORF1ab/nsp12449A449TGctAct6060B.1.1.70.000054
ORF1ab/nsp12449A449TGctAct6060B.1.6210.005311
ORF1ab/nsp12449A449TGctAct2828AY.1030.000174
ORF1ab/nsp12449A449TGctAct99AY.30.00009
ORF1ab/nsp12449A449TGctAct88AY.40.000012
ORF1ab/nsp12449A449TGctAct55B.10.000046
ORF1ab/nsp12449A449TGctAct44AY.390.000099
ORF1ab/nsp12449A449TGctAct44AY.430.000018
ORF1ab/nsp12449A449TGctAct33AY.200.000117
ORF1ab/nsp12449A449TGctAct33B.1.2400.000647
ORF1ab/nsp12449A449TGctAct33B.1.4290.000071
ORF1ab/nsp12449A449TGctAct22AY.1100.000225
ORF1ab/nsp12449A449TGctAct22AY.1200.000074
ORF1ab/nsp12449A449TGctAct22AY.250.000012
ORF1ab/nsp12449A449TGctAct22B.1.617.20.000008
ORF1ab/nsp12449A449TGctAct22P.1.140.000096
ORF1ab/nsp12449A449TGctAct11AY.1020.000027
ORF1ab/nsp12449A449TGctAct11AY.120.2.10.000498
ORF1ab/nsp12449A449TGctAct11AY.290.000016
ORF1ab/nsp12449A449TGctAct11AY.29.10.000221
ORF1ab/nsp12449A449TGctAct11AY.440.000006
ORF1ab/nsp12449A449TGctAct11AY.50.000021
ORF1ab/nsp12449A449TGctAct11AY.710.000475
ORF1ab/nsp12449A449TGctAct11AY.90.000068
ORF1ab/nsp12449A449TGctAct11B0.000128
ORF1ab/nsp12449A449TGctAct11B.1.10.000018
ORF1ab/nsp12449A449TGctAct11B.1.1.2100.005714
ORF1ab/nsp12449A449TGctAct11B.1.177.210.000076
ORF1ab/nsp12449A449TGctAct11B.1.20.000009
ORF1ab/nsp12449A449TGctAct11B.1.3690.000285
ORF1ab/nsp12449A449TGctAct11B.1.466.20.000391