CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 449

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12449A449VA4841VnonsyngCtgTt37423742114785-14787
ORF1ab/nsp12449A449AA4841AsyngcTgcC8534860.56975414785-14787
ORF1ab/nsp12449A449AA4841AsyngcTgcA8533660.42907414785-14787
ORF1ab/nsp12449A449AA4841AsyngcTgcG85310.0011723314785-14787
ORF1ab/nsp12449A449SA4841SnonsynGctTct2582560.99224814785-14787
ORF1ab/nsp12449A449SA4841SnonsynGCtAGt25820.0077519414785-14787
ORF1ab/nsp12449A449TA4841TnonsynGctAct212212114785-14787
ORF1ab/nsp12449A449delA4841deldelGCT---6060114785-14787
ORF1ab/nsp12449A449DA4841DnonsyngCtgAt1313114785-14787
ORF1ab/nsp12449A449PA4841PnonsynGctCct66114785-14787
ORF1ab/nsp12449A449GA4841GnonsyngCtgGt650.83333314785-14787
ORF1ab/nsp12449A449GA4841GnonsyngCTgGC610.16666714785-14787
ORF1ab/nsp12449A449del1A4841del1delgcTgc-320.66666714785-14787
ORF1ab/nsp12449A449del1A4841del1delGct-ct310.33333314785-14787
ORF1ab/nsp12449A449del2A4841del2delGCt--t22114785-14787
ORF1ab/nsp12449A449EA4841EnonsyngCTgAG11114785-14787
ORF1ab/nsp12449A449IA4841InonsynGCtATt11114785-14787
ORF1ab/nsp12449A449YA4841YnonsynGCtTAt11114785-14787

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12449A449VgCtgTt37423742All0.000716
ORF1ab/nsp12449A449AgcTgcC486853All0.000093
ORF1ab/nsp12449A449AgcTgcA366853All0.00007
ORF1ab/nsp12449A449AgcTgcG1853All0
ORF1ab/nsp12449A449VgCtgTt403403B.1.1.70.000361
ORF1ab/nsp12449A449AgcTgcA360380B.1.1.70.000322
ORF1ab/nsp12449A449AgcTgcC19380B.1.1.70.000017
ORF1ab/nsp12449A449AgcTgcG1380B.1.1.70.000001
ORF1ab/nsp12449A449VgCtgTt344344B.1.10.00624
ORF1ab/nsp12449A449VgCtgTt319319B.1.130.75772
ORF1ab/nsp12449A449VgCtgTt316316B.1.20.002782
ORF1ab/nsp12449A449VgCtgTt266266B.1.1.2690.359946
ORF1ab/nsp12449A449SGctTct256258All0.000049
ORF1ab/nsp12449A449SGCtAGt2258All0
ORF1ab/nsp12449A449TGctAct212212All0.000041
ORF1ab/nsp12449A449VgCtgTt171171AY.40.000266
ORF1ab/nsp12449A449VgCtgTt151151B.1.2430.010507
ORF1ab/nsp12449A449VgCtgTt147147B.10.001346
ORF1ab/nsp12449A449AgcTgcC100100B.1.617.20.000377
ORF1ab/nsp12449A449AgcTgcC9898AY.30.000975
ORF1ab/nsp12449A449VgCtgTt9696B.1.4230.979592
ORF1ab/nsp12449A449VgCtgTt8787B.1.1.2670.878788
ORF1ab/nsp12449A449SGctTct8181AY.40.000126
ORF1ab/nsp12449A449VgCtgTt8181B.1.617.20.000305
ORF1ab/nsp12449A449VgCtgTt7979B.1.1770.00104
ORF1ab/nsp12449A449VgCtgTt7777AY.250.000463
ORF1ab/nsp12449A449VgCtgTt7474B.1.4290.001741
ORF1ab/nsp12449A449SGctTct7171B.1.617.20.000267
ORF1ab/nsp12449A449delGCT---6060All0.000011
ORF1ab/nsp12449A449TGctAct6060B.1.1.70.000054
ORF1ab/nsp12449A449TGctAct6060B.1.6210.005311
ORF1ab/nsp12449A449VgCtgTt5555AY.750.003081
ORF1ab/nsp12449A449VgCtgTt5050AY.30.000497
ORF1ab/nsp12449A449VgCtgTt4040AY.330.002671
ORF1ab/nsp12449A449VgCtgTt3636AY.290.000568
ORF1ab/nsp12449A449VgCtgTt3535B.1.2840.460526
ORF1ab/nsp12449A449AgcTgcC3232AY.40.00005
ORF1ab/nsp12449A449VgCtgTt3030AY.1030.000186
ORF1ab/nsp12449A449delGCT---2929B.1.1.70.000026
ORF1ab/nsp12449A449TGctAct2828AY.1030.000174
ORF1ab/nsp12449A449AgcTgcC2828AY.1050.018006
ORF1ab/nsp12449A449VgCtgTt2828AY.440.00017
ORF1ab/nsp12449A449VgCtgTt2828B.1.177.350.01935
ORF1ab/nsp12449A449VgCtgTt2727B.1.3510.000803
ORF1ab/nsp12449A449VgCtgTt2626AY.4.20.000564
ORF1ab/nsp12449A449VgCtgTt2626B.1.2210.001847
ORF1ab/nsp12449A449VgCtgTt2323B.1.2770.547619
ORF1ab/nsp12449A449VgCtgTt2323B.1.5960.002004
ORF1ab/nsp12449A449VgCtgTt2020AY.1180.001253
ORF1ab/nsp12449A449VgCtgTt2020AY.390.000494
ORF1ab/nsp12449A449VgCtgTt2020AY.430.000089
ORF1ab/nsp12449A449VgCtgTt1818AY.50.000372
ORF1ab/nsp12449A449VgCtgTt1818B.1.1.1900.9
ORF1ab/nsp12449A449AgcTgcC1617AY.430.000071
ORF1ab/nsp12449A449AgcTgcA117AY.430.000004
ORF1ab/nsp12449A449AgcTgcC1717B.10.000156
ORF1ab/nsp12449A449VgCtgTt1616B.1.1.5190.000635
ORF1ab/nsp12449A449VgCtgTt1616P.10.000252
ORF1ab/nsp12449A449AgcTgcC1515AY.1020.000398
ORF1ab/nsp12449A449VgCtgTt1515AY.980.001185
ORF1ab/nsp12449A449VgCtgTt1515B.1.5260.000353
ORF1ab/nsp12449A449AgcTgcC1414AY.980.001106
ORF1ab/nsp12449A449VgCtgTt1414B.1.2340.001847
ORF1ab/nsp12449A449DgCtgAt1313All0.000002
ORF1ab/nsp12449A449AgcTgcC1212B.1.20.000106
ORF1ab/nsp12449A449AgcTgcC1011AY.1030.000062
ORF1ab/nsp12449A449AgcTgcA111AY.1030.000006
ORF1ab/nsp12449A449VgCtgTt1111AY.130.001771
ORF1ab/nsp12449A449AgcTgcC1111AY.230.000767
ORF1ab/nsp12449A449SGctTct1111AY.430.000049
ORF1ab/nsp12449A449VgCtgTt1111B.1.5750.003337
ORF1ab/nsp12449A449VgCtgTt1111C.360.010018
ORF1ab/nsp12449A449SGctTct1010AY.440.000061
ORF1ab/nsp12449A449VgCtgTt1010AY.540.000953
ORF1ab/nsp12449A449VgCtgTt1010B.1.3610.012887
ORF1ab/nsp12449A449AgcTgcC1010P.10.000158
ORF1ab/nsp12449A449VgCtgTt99AY.200.00035
ORF1ab/nsp12449A449TGctAct99AY.30.00009
ORF1ab/nsp12449A449VgCtgTt99AY.3.10.000767
ORF1ab/nsp12449A449VgCtgTt99B.1.1.700.00307
ORF1ab/nsp12449A449TGctAct88AY.40.000012
ORF1ab/nsp12449A449AgcTgcC88AY.640.004762
ORF1ab/nsp12449A449AgcTgcC88B.1.1.2220.001632
ORF1ab/nsp12449A449SGctTct88B.1.1.70.000007
ORF1ab/nsp12449A449VgCtgTt88B.1.1600.00025
ORF1ab/nsp12449A449VgCtgTt88B.1.177.210.000612
ORF1ab/nsp12449A449VgCtgTt88B.1.177.810.001515
ORF1ab/nsp12449A449VgCtgTt88B.1.2580.000532
ORF1ab/nsp12449A449VgCtgTt88B.1.3690.002282
ORF1ab/nsp12449A449VgCtgTt77AY.1020.000186
ORF1ab/nsp12449A449SGctTct77AY.470.000218
ORF1ab/nsp12449A449VgCtgTt77B.1.1.1700.008728
ORF1ab/nsp12449A449VgCtgTt77B.1.1.2680.104478
ORF1ab/nsp12449A449VgCtgTt77B.1.177.860.001284
ORF1ab/nsp12449A449VgCtgTt77B.1.2400.001509
ORF1ab/nsp12449A449VgCtgTt77B.1.360.001021
ORF1ab/nsp12449A449VgCtgTt77B.1.4270.000353
ORF1ab/nsp12449A449VgCtgTt77D.20.000525
ORF1ab/nsp12449A449PGctCct66All0.000001
ORF1ab/nsp12449A449GgCtgGt56All0.000001
ORF1ab/nsp12449A449GgCTgGC16All0
ORF1ab/nsp12449A449AgcTgcC66AY.39.10.000238
ORF1ab/nsp12449A449VgCtgTt66AY.470.000187
ORF1ab/nsp12449A449VgCtgTt66B0.000767
ORF1ab/nsp12449A449VgCtgTt66B.1.177.120.00091
ORF1ab/nsp12449A449SGctTct66B.1.2580.000399
ORF1ab/nsp12449A449VgCtgTt55A.270.008278
ORF1ab/nsp12449A449VgCtgTt55AU.10.006329
ORF1ab/nsp12449A449VgCtgTt55AY.1200.000186
ORF1ab/nsp12449A449VgCtgTt55AY.29.10.001103
ORF1ab/nsp12449A449AgcTgcC55AY.390.000124
ORF1ab/nsp12449A449SGctTct55AY.50.000103
ORF1ab/nsp12449A449SGctTct55AY.75.10.000902
ORF1ab/nsp12449A449TGctAct55B.10.000046
ORF1ab/nsp12449A449VgCtgTt55B.1.1.2220.00102
ORF1ab/nsp12449A449VgCtgTt55B.1.1.4860.007886
ORF1ab/nsp12449A449VgCtgTt55B.1.177.70.000824
ORF1ab/nsp12449A449VgCtgTt55B.1.36.290.002587
ORF1ab/nsp12449A449VgCtgTt55B.1.3670.003962
ORF1ab/nsp12449A449VgCtgTt55B.1.564.10.007886
ORF1ab/nsp12449A449VgCtgTt55B.1.617.10.000645
ORF1ab/nsp12449A449VgCtgTt44AY.1000.000184
ORF1ab/nsp12449A449SGctTct44AY.1020.000106
ORF1ab/nsp12449A449VgCtgTt44AY.230.000279
ORF1ab/nsp12449A449AgcTgcC44AY.250.000024
ORF1ab/nsp12449A449VgCtgTt44AY.260.000113
ORF1ab/nsp12449A449TGctAct44AY.390.000099
ORF1ab/nsp12449A449TGctAct44AY.430.000018
ORF1ab/nsp12449A449AgcTgcC44AY.440.000024
ORF1ab/nsp12449A449VgCtgTt44AY.570.002625
ORF1ab/nsp12449A449SGctTct44AY.610.000419
ORF1ab/nsp12449A449AgcTgcA24AY.850.000854
ORF1ab/nsp12449A449AgcTgcC24AY.850.000854
ORF1ab/nsp12449A449VgCtgTt44AY.98.10.000194
ORF1ab/nsp12449A449delGCT---44B.1.1770.000053
ORF1ab/nsp12449A449AgcTgcC34B.1.1770.00004
ORF1ab/nsp12449A449AgcTgcA14B.1.1770.000013
ORF1ab/nsp12449A449VgCtgTt44B.1.177.90.005326
ORF1ab/nsp12449A449VgCtgTt44B.1.466.20.001565
ORF1ab/nsp12449A449delGCT---44B.1.5250.000453
ORF1ab/nsp12449A449VgCtgTt44B.1.5250.000453
ORF1ab/nsp12449A449VgCtgTt44B.1.6370.000292
ORF1ab/nsp12449A449VgCtgTt44P.1.150.000929
ORF1ab/nsp12449A449VgCtgTt33AD.20.000657
ORF1ab/nsp12449A449VgCtgTt33AE.80.001467
ORF1ab/nsp12449A449del1gcTgc-23All0
ORF1ab/nsp12449A449del1Gct-ct13All0
ORF1ab/nsp12449A449VgCtgTt33AP.10.004505
ORF1ab/nsp12449A449VgCtgTt33AY.1190.000106
ORF1ab/nsp12449A449VgCtgTt33AY.140.000264
ORF1ab/nsp12449A449TGctAct33AY.200.000117
ORF1ab/nsp12449A449VgCtgTt33AY.320.001597
ORF1ab/nsp12449A449VgCtgTt33AY.340.000291
ORF1ab/nsp12449A449SGctTct33AY.39.1.10.002174
ORF1ab/nsp12449A449delGCT---33AY.40.000005
ORF1ab/nsp12449A449AgcTgcC33AY.420.000121
ORF1ab/nsp12449A449SGctTct33AY.420.000121
ORF1ab/nsp12449A449VgCtgTt33AY.450.000365
ORF1ab/nsp12449A449AgcTgcC33AY.460.000312
ORF1ab/nsp12449A449VgCtgTt33AY.60.000123
ORF1ab/nsp12449A449VgCtgTt33AY.70.000588
ORF1ab/nsp12449A449SGctTct33B.10.000027
ORF1ab/nsp12449A449VgCtgTt33B.1.1.2090.026786
ORF1ab/nsp12449A449AgcTgcC33B.1.1.250.001706
ORF1ab/nsp12449A449VgCtgTt33B.1.1.3070.007595
ORF1ab/nsp12449A449VgCtgTt33B.1.1.3180.000905
ORF1ab/nsp12449A449AgcTgcC33B.1.1.330.001263
ORF1ab/nsp12449A449VgCtgTt33B.1.1.4090.008499
ORF1ab/nsp12449A449VgCtgTt33B.1.1.4340.001046
ORF1ab/nsp12449A449VgCtgTt33B.1.1470.002268
ORF1ab/nsp12449A449VgCtgTt33B.1.177.320.004049
ORF1ab/nsp12449A449VgCtgTt33B.1.1790.011278
ORF1ab/nsp12449A449VgCtgTt33B.1.1890.012876
ORF1ab/nsp12449A449VgCtgTt33B.1.2320.001612
ORF1ab/nsp12449A449TGctAct33B.1.2400.000647
ORF1ab/nsp12449A449AgcTgcC23B.1.2430.000139
ORF1ab/nsp12449A449AgcTgcA13B.1.2430.00007
ORF1ab/nsp12449A449VgCtgTt33B.1.2980.006342
ORF1ab/nsp12449A449VgCtgTt33B.1.36.310.005254
ORF1ab/nsp12449A449AgcTgcC33B.1.3620.004622
ORF1ab/nsp12449A449SGctTct33B.1.3980.008929
ORF1ab/nsp12449A449VgCtgTt33B.1.4000.001287
ORF1ab/nsp12449A449TGctAct33B.1.4290.000071
ORF1ab/nsp12449A449AgcTgcC33B.1.4290.000071
ORF1ab/nsp12449A449AgcTgcC33B.1.5260.000071
ORF1ab/nsp12449A449VgCtgTt33B.1.5510.003871
ORF1ab/nsp12449A449VgCtgTt33B.1.5880.00273
ORF1ab/nsp12449A449delGCT---33B.1.617.20.000011
ORF1ab/nsp12449A449VgCtgTt33B.1.6210.000266
ORF1ab/nsp12449A449VgCtgTt33P.1.140.000143
ORF1ab/nsp12449A449VgCtgTt33R.10.00027
ORF1ab/nsp12449A449VgCtgTt22A0.000774
ORF1ab/nsp12449A449VgCtgTt22A.2.50.000998
ORF1ab/nsp12449A449AgcTgcC22A.2.50.000998
ORF1ab/nsp12449A449VgCtgTt22AE.50.037037
ORF1ab/nsp12449A449del2GCt--t22All0
ORF1ab/nsp12449A449TGctAct22AY.1100.000225
ORF1ab/nsp12449A449VgCtgTt22AY.1170.000169
ORF1ab/nsp12449A449VgCtgTt22AY.120.000632
ORF1ab/nsp12449A449TGctAct22AY.1200.000074
ORF1ab/nsp12449A449TGctAct22AY.250.000012
ORF1ab/nsp12449A449PGctCct22AY.340.000194
ORF1ab/nsp12449A449VgCtgTt22AY.360.000296
ORF1ab/nsp12449A449DgCtgAt22AY.40.000003
ORF1ab/nsp12449A449delGCT---22AY.4.50.000215
ORF1ab/nsp12449A449VgCtgTt22AY.460.000208
ORF1ab/nsp12449A449AgcTgcC22AY.46.40.000329
ORF1ab/nsp12449A449VgCtgTt22AY.610.00021
ORF1ab/nsp12449A449AgcTgcC22AY.7.10.000225
ORF1ab/nsp12449A449VgCtgTt22AY.75.10.000361
ORF1ab/nsp12449A449VgCtgTt22AY.880.001768
ORF1ab/nsp12449A449VgCtgTt22AY.9.20.000073
ORF1ab/nsp12449A449VgCtgTt22AY.930.000546
ORF1ab/nsp12449A449VgCtgTt22B.1.1.1570.001826
ORF1ab/nsp12449A449VgCtgTt22B.1.1.1760.000879
ORF1ab/nsp12449A449AgcTgcC22B.1.1.1760.000879
ORF1ab/nsp12449A449VgCtgTt22B.1.1.250.001137
ORF1ab/nsp12449A449VgCtgTt22B.1.1.3040.005618
ORF1ab/nsp12449A449VgCtgTt22B.1.1.5230.003125
ORF1ab/nsp12449A449del2GCt--t22B.1.1.70.000002
ORF1ab/nsp12449A449DgCtgAt22B.1.1.70.000002
ORF1ab/nsp12449A449VgCtgTt22B.1.120.016
ORF1ab/nsp12449A449VgCtgTt22B.1.177.150.001262
ORF1ab/nsp12449A449VgCtgTt22B.1.177.30.015267
ORF1ab/nsp12449A449VgCtgTt22B.1.177.570.000562
ORF1ab/nsp12449A449SGctTct22B.1.177.720.00678
ORF1ab/nsp12449A449SGctTct12B.1.20.000009
ORF1ab/nsp12449A449SGCtAGt12B.1.20.000009
ORF1ab/nsp12449A449VgCtgTt22B.1.36.180.00084
ORF1ab/nsp12449A449AgcTgcC22B.1.3990.003868
ORF1ab/nsp12449A449GgCtgGt12B.1.4170.028571
ORF1ab/nsp12449A449GgCTgGC12B.1.4170.028571
ORF1ab/nsp12449A449AgcTgcC22B.1.4270.000101
ORF1ab/nsp12449A449VgCtgTt22B.1.5230.004902
ORF1ab/nsp12449A449VgCtgTt22B.1.5770.001375
ORF1ab/nsp12449A449VgCtgTt22B.1.5950.000522
ORF1ab/nsp12449A449TGctAct22B.1.617.20.000008
ORF1ab/nsp12449A449VgCtgTt22B.1.910.004149
ORF1ab/nsp12449A449VgCtgTt22C.370.000232
ORF1ab/nsp12449A449AgcTgcC22C.370.000232
ORF1ab/nsp12449A449SGctTct22P.10.000032
ORF1ab/nsp12449A449TGctAct22P.1.140.000096
ORF1ab/nsp12449A449AgcTgcC22Q.10.000253
ORF1ab/nsp12449A449YGCtTAt110.055556
ORF1ab/nsp12449A449SGctTct110.055556
ORF1ab/nsp12449A449DgCtgAt110.055556
ORF1ab/nsp12449A449VgCtgTt11A.2.30.004739
ORF1ab/nsp12449A449VgCtgTt11A.280.002646
ORF1ab/nsp12449A449IGCtATt11All0
ORF1ab/nsp12449A449YGCtTAt11All0
ORF1ab/nsp12449A449EgCTgAG11All0
ORF1ab/nsp12449A449VgCtgTt11AY.10.000396
ORF1ab/nsp12449A449SGctTct11AY.1000.000046
ORF1ab/nsp12449A449PGctCct11AY.1020.000027
ORF1ab/nsp12449A449TGctAct11AY.1020.000027
ORF1ab/nsp12449A449DgCtgAt11AY.1030.000006
ORF1ab/nsp12449A449GgCtgGt11AY.1030.000006
ORF1ab/nsp12449A449VgCtgTt11AY.1050.000643
ORF1ab/nsp12449A449VgCtgTt11AY.1130.000142
ORF1ab/nsp12449A449SGctTct11AY.1170.000085
ORF1ab/nsp12449A449SGctTct11AY.1180.000063
ORF1ab/nsp12449A449AgcTgcC11AY.1190.000035
ORF1ab/nsp12449A449SGctTct11AY.1200.000037
ORF1ab/nsp12449A449AgcTgcC11AY.1200.000037
ORF1ab/nsp12449A449TGctAct11AY.120.2.10.000498
ORF1ab/nsp12449A449AgcTgcC11AY.1210.000135
ORF1ab/nsp12449A449VgCtgTt11AY.1210.000135
ORF1ab/nsp12449A449VgCtgTt11AY.160.00038
ORF1ab/nsp12449A449SGctTct11AY.190.00114
ORF1ab/nsp12449A449SGctTct11AY.200.000039
ORF1ab/nsp12449A449AgcTgcC11AY.240.000431
ORF1ab/nsp12449A449SGctTct11AY.250.000006
ORF1ab/nsp12449A449VgCtgTt11AY.270.000065
ORF1ab/nsp12449A449TGctAct11AY.290.000016
ORF1ab/nsp12449A449TGctAct11AY.29.10.000221
ORF1ab/nsp12449A449AgcTgcC11AY.300.000396
ORF1ab/nsp12449A449delGCT---11AY.360.000148
ORF1ab/nsp12449A449SGctTct11AY.390.000025
ORF1ab/nsp12449A449SGctTct11AY.39.10.00004
ORF1ab/nsp12449A449VgCtgTt11AY.4.40.000409
ORF1ab/nsp12449A449VgCtgTt11AY.4.50.000107
ORF1ab/nsp12449A449AgcTgcC11AY.4.50.000107
ORF1ab/nsp12449A449SGctTct11AY.400.000964
ORF1ab/nsp12449A449AgcTgcC11AY.400.000964
ORF1ab/nsp12449A449delGCT---11AY.430.000004
ORF1ab/nsp12449A449TGctAct11AY.440.000006
ORF1ab/nsp12449A449GgCtgGt11AY.440.000006
ORF1ab/nsp12449A449PGctCct11AY.440.000006
ORF1ab/nsp12449A449AgcTgcC11AY.46.10.001027
ORF1ab/nsp12449A449VgCtgTt11AY.46.40.000165
ORF1ab/nsp12449A449VgCtgTt11AY.46.60.000072
ORF1ab/nsp12449A449SGctTct11AY.46.60.000072
ORF1ab/nsp12449A449AgcTgcC11AY.470.000031
ORF1ab/nsp12449A449PGctCct11AY.50.000021
ORF1ab/nsp12449A449TGctAct11AY.50.000021
ORF1ab/nsp12449A449DgCtgAt11AY.5.40.000277
ORF1ab/nsp12449A449VgCtgTt11AY.500.000799
ORF1ab/nsp12449A449delGCT---11AY.520.000814
ORF1ab/nsp12449A449VgCtgTt11AY.520.000814
ORF1ab/nsp12449A449VgCtgTt11AY.550.000917
ORF1ab/nsp12449A449VgCtgTt11AY.590.00053
ORF1ab/nsp12449A449GgCtgGt11AY.60.000041
ORF1ab/nsp12449A449VgCtgTt11AY.600.000938
ORF1ab/nsp12449A449SGctTct11AY.650.000533
ORF1ab/nsp12449A449AgcTgcC11AY.660.00107
ORF1ab/nsp12449A449SGctTct11AY.680.000274
ORF1ab/nsp12449A449TGctAct11AY.710.000475
ORF1ab/nsp12449A449VgCtgTt11AY.740.000116
ORF1ab/nsp12449A449VgCtgTt11AY.830.001724
ORF1ab/nsp12449A449VgCtgTt11AY.850.000427
ORF1ab/nsp12449A449VgCtgTt11AY.90.000068
ORF1ab/nsp12449A449TGctAct11AY.90.000068
ORF1ab/nsp12449A449VgCtgTt11AY.9.10.000084
ORF1ab/nsp12449A449AgcTgcC11AY.9.20.000037
ORF1ab/nsp12449A449AgcTgcC11AY.910.00073
ORF1ab/nsp12449A449SGctTct11AY.920.000287
ORF1ab/nsp12449A449TGctAct11B0.000128
ORF1ab/nsp12449A449delGCT---11B.10.000009
ORF1ab/nsp12449A449DgCtgAt11B.10.000009
ORF1ab/nsp12449A449TGctAct11B.1.10.000018
ORF1ab/nsp12449A449delGCT---11B.1.10.000018
ORF1ab/nsp12449A449del1gcTgc-11B.1.10.000018
ORF1ab/nsp12449A449VgCtgTt11B.1.1.100.001115
ORF1ab/nsp12449A449delGCT---11B.1.1.1390.022727
ORF1ab/nsp12449A449VgCtgTt11B.1.1.1810.004545
ORF1ab/nsp12449A449VgCtgTt11B.1.1.1890.001513
ORF1ab/nsp12449A449VgCtgTt11B.1.1.1910.004762
ORF1ab/nsp12449A449TGctAct11B.1.1.2100.005714
ORF1ab/nsp12449A449VgCtgTt11B.1.1.2140.000055
ORF1ab/nsp12449A449VgCtgTt11B.1.1.2200.001859
ORF1ab/nsp12449A449delGCT---11B.1.1.2360.006897
ORF1ab/nsp12449A449VgCtgTt11B.1.1.2610.008621
ORF1ab/nsp12449A449VgCtgTt11B.1.1.2650.003155
ORF1ab/nsp12449A449SGctTct11B.1.1.2740.005051
ORF1ab/nsp12449A449VgCtgTt11B.1.1.2770.000759
ORF1ab/nsp12449A449VgCtgTt11B.1.1.280.000311
ORF1ab/nsp12449A449VgCtgTt11B.1.1.2840.000107
ORF1ab/nsp12449A449VgCtgTt11B.1.1.2940.001266
ORF1ab/nsp12449A449AgcTgcC11B.1.1.2970.002237
ORF1ab/nsp12449A449delGCT---11B.1.1.3060.000438
ORF1ab/nsp12449A449delGCT---11B.1.1.3110.000358
ORF1ab/nsp12449A449VgCtgTt11B.1.1.3170.000412
ORF1ab/nsp12449A449VgCtgTt11B.1.1.3290.003846
ORF1ab/nsp12449A449VgCtgTt11B.1.1.330.000421
ORF1ab/nsp12449A449DgCtgAt11B.1.1.3350.012987
ORF1ab/nsp12449A449SGctTct11B.1.1.340.013158
ORF1ab/nsp12449A449VgCtgTt11B.1.1.4160.000905
ORF1ab/nsp12449A449VgCtgTt11B.1.1.4180.022727
ORF1ab/nsp12449A449VgCtgTt11B.1.1.4200.001006
ORF1ab/nsp12449A449VgCtgTt11B.1.1.630.000386
ORF1ab/nsp12449A449del1gcTgc-11B.1.1.70.000001
ORF1ab/nsp12449A449VgCtgTt11B.1.1.80.003584
ORF1ab/nsp12449A449VgCtgTt11B.1.1050.009615
ORF1ab/nsp12449A449VgCtgTt11B.1.110.30.000718
ORF1ab/nsp12449A449VgCtgTt11B.1.1110.001175
ORF1ab/nsp12449A449VgCtgTt11B.1.1120.005181
ORF1ab/nsp12449A449DgCtgAt11B.1.140.017544
ORF1ab/nsp12449A449AgcTgcC11B.1.160.160.000929
ORF1ab/nsp12449A449VgCtgTt11B.1.160.160.000929
ORF1ab/nsp12449A449VgCtgTt11B.1.160.200.008929
ORF1ab/nsp12449A449delGCT---11B.1.160.230.004831
ORF1ab/nsp12449A449VgCtgTt11B.1.1630.02439
ORF1ab/nsp12449A449SGctTct11B.1.1770.000013
ORF1ab/nsp12449A449EgCTgAG11B.1.1770.000013
ORF1ab/nsp12449A449VgCtgTt11B.1.177.170.000821
ORF1ab/nsp12449A449GgCtgGt11B.1.177.180.00116
ORF1ab/nsp12449A449delGCT---11B.1.177.180.00116
ORF1ab/nsp12449A449TGctAct11B.1.177.210.000076
ORF1ab/nsp12449A449VgCtgTt11B.1.177.330.001645
ORF1ab/nsp12449A449delGCT---11B.1.177.40.000211
ORF1ab/nsp12449A449VgCtgTt11B.1.177.40.000211
ORF1ab/nsp12449A449AgcTgcC11B.1.177.430.001477
ORF1ab/nsp12449A449VgCtgTt11B.1.177.50.001242
ORF1ab/nsp12449A449delGCT---11B.1.177.510.004566
ORF1ab/nsp12449A449VgCtgTt11B.1.177.520.001757
ORF1ab/nsp12449A449delGCT---11B.1.177.540.000606
ORF1ab/nsp12449A449VgCtgTt11B.1.177.540.000606
ORF1ab/nsp12449A449AgcTgcC11B.1.177.580.001332
ORF1ab/nsp12449A449VgCtgTt11B.1.177.650.000665
ORF1ab/nsp12449A449VgCtgTt11B.1.177.730.000566
ORF1ab/nsp12449A449VgCtgTt11B.1.177.760.002494
ORF1ab/nsp12449A449VgCtgTt11B.1.177.80.000752
ORF1ab/nsp12449A449DgCtgAt11B.1.20.000009
ORF1ab/nsp12449A449TGctAct11B.1.20.000009
ORF1ab/nsp12449A449VgCtgTt11B.1.2250.015385
ORF1ab/nsp12449A449VgCtgTt11B.1.2360.002053
ORF1ab/nsp12449A449SGctTct11B.1.2400.000216
ORF1ab/nsp12449A449SGctTct11B.1.2430.00007
ORF1ab/nsp12449A449VgCtgTt11B.1.258.110.000396
ORF1ab/nsp12449A449VgCtgTt11B.1.258.170.000104
ORF1ab/nsp12449A449VgCtgTt11B.1.258.30.001675
ORF1ab/nsp12449A449VgCtgTt11B.1.2700.005618
ORF1ab/nsp12449A449IGCtATt11B.1.2770.02381
ORF1ab/nsp12449A449VgCtgTt11B.1.2930.0125
ORF1ab/nsp12449A449SGctTct11B.1.30.002618
ORF1ab/nsp12449A449VgCtgTt11B.1.3200.001245
ORF1ab/nsp12449A449VgCtgTt11B.1.3360.002439
ORF1ab/nsp12449A449VgCtgTt11B.1.3460.001311
ORF1ab/nsp12449A449VgCtgTt11B.1.3490.000715
ORF1ab/nsp12449A449AgcTgcC11B.1.3510.00003
ORF1ab/nsp12449A449VgCtgTt11B.1.351.20.000303
ORF1ab/nsp12449A449VgCtgTt11B.1.3570.009524
ORF1ab/nsp12449A449VgCtgTt11B.1.36.170.000494
ORF1ab/nsp12449A449SGctTct11B.1.36.170.000494
ORF1ab/nsp12449A449delGCT---11B.1.36.170.000494
ORF1ab/nsp12449A449VgCtgTt11B.1.36.250.002208
ORF1ab/nsp12449A449SGctTct11B.1.36.290.000517
ORF1ab/nsp12449A449VgCtgTt11B.1.36.370.002778
ORF1ab/nsp12449A449TGctAct11B.1.3690.000285
ORF1ab/nsp12449A449VgCtgTt11B.1.3700.008
ORF1ab/nsp12449A449VgCtgTt11B.1.3750.00082
ORF1ab/nsp12449A449SGCtAGt11B.1.3770.004566
ORF1ab/nsp12449A449VgCtgTt11B.1.3890.001002
ORF1ab/nsp12449A449SGctTct11B.1.3960.000706
ORF1ab/nsp12449A449AgcTgcC11B.1.3970.004854
ORF1ab/nsp12449A449VgCtgTt11B.1.4090.000781
ORF1ab/nsp12449A449VgCtgTt11B.1.416.10.001563
ORF1ab/nsp12449A449AgcTgcC11B.1.4170.028571
ORF1ab/nsp12449A449VgCtgTt11B.1.438.10.000107
ORF1ab/nsp12449A449TGctAct11B.1.466.20.000391
ORF1ab/nsp12449A449DgCtgAt11B.1.5300.007143
ORF1ab/nsp12449A449VgCtgTt11B.1.5610.000397
ORF1ab/nsp12449A449VgCtgTt11B.1.5640.000426
ORF1ab/nsp12449A449VgCtgTt11B.1.5650.00081
ORF1ab/nsp12449A449VgCtgTt11B.1.575.10.002439
ORF1ab/nsp12449A449VgCtgTt11B.1.5870.001898
ORF1ab/nsp12449A449VgCtgTt11B.1.595.10.005848
ORF1ab/nsp12449A449AgcTgcC11B.1.5960.000087
ORF1ab/nsp12449A449AgcTgcC11B.1.617.10.000129
ORF1ab/nsp12449A449del1Gct-ct11B.1.617.20.000004
ORF1ab/nsp12449A449DgCtgAt11B.1.617.20.000004
ORF1ab/nsp12449A449VgCtgTt11B.1.6230.000536
ORF1ab/nsp12449A449VgCtgTt11B.310.003731
ORF1ab/nsp12449A449VgCtgTt11B.370.028571
ORF1ab/nsp12449A449VgCtgTt11B.400.000364
ORF1ab/nsp12449A449VgCtgTt11B.60.00091
ORF1ab/nsp12449A449VgCtgTt11B.6.60.000889
ORF1ab/nsp12449A449VgCtgTt11C.160.00106
ORF1ab/nsp12449A449VgCtgTt11C.350.000774
ORF1ab/nsp12449A449VgCtgTt11C.36.30.000567
ORF1ab/nsp12449A449AgcTgcC11C.37.10.002618
ORF1ab/nsp12449A449VgCtgTt11C.60.037037
ORF1ab/nsp12449A449PGctCct11D.20.000075
ORF1ab/nsp12449A449SGctTct11D.20.000075
ORF1ab/nsp12449A449AgcTgcC11N.40.004255
ORF1ab/nsp12449A449VgCtgTt11P.1.100.000269
ORF1ab/nsp12449A449AgcTgcC11P.1.140.000048
ORF1ab/nsp12449A449VgCtgTt11P.1.160.000374
ORF1ab/nsp12449A449VgCtgTt11P.20.000187
ORF1ab/nsp12449A449SGctTct11P.20.000187
ORF1ab/nsp12449A449VgCtgTt11Q.10.000126
ORF1ab/nsp12449A449VgCtgTt11Q.20.000613
ORF1ab/nsp12449A449VgCtgTt11Q.30.000145
ORF1ab/nsp12449A449AgcTgcC11Q.30.000145
ORF1ab/nsp12449A449VgCtgTt11Q.80.000165
ORF1ab/nsp12449A449SGctTct11Q.80.000165
ORF1ab/nsp12449A449VgCtgTt11W.40.001351