CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 424 & Codon = gtT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12424V424VV4816VsyngtGgtT393736150.91821214710-14712

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12424V424VgtGgtT36153937All0.000691
ORF1ab/nsp12424V424VgtGgtT13251328AY.1030.008227
ORF1ab/nsp12424V424VgtGgtT364388B.1.1.70.000326
ORF1ab/nsp12424V424VgtGgtT353367AY.40.000549
ORF1ab/nsp12424V424VgtGgtT97248P.10.001528
ORF1ab/nsp12424V424VgtGgtT196198AY.440.001193
ORF1ab/nsp12424V424VgtGgtT126137B.1.617.20.000474
ORF1ab/nsp12424V424VgtGgtT9999C.370.01149
ORF1ab/nsp12424V424VgtGgtT9396AY.430.000412
ORF1ab/nsp12424V424VgtGgtT4963B.10.000449
ORF1ab/nsp12424V424VgtGgtT5051B.1.20.00044
ORF1ab/nsp12424V424VgtGgtT4141B.1.177.460.037649
ORF1ab/nsp12424V424VgtGgtT3340AY.250.000198
ORF1ab/nsp12424V424VgtGgtT3737B.1.36.220.044686
ORF1ab/nsp12424V424VgtGgtT3132B.1.1.2840.003329
ORF1ab/nsp12424V424VgtGgtT3030AY.1020.000795
ORF1ab/nsp12424V424VgtGgtT2929AY.340.002812
ORF1ab/nsp12424V424VgtGgtT2929B.1.1.390.014781
ORF1ab/nsp12424V424VgtGgtT2829B.1.1770.000369
ORF1ab/nsp12424V424VgtGgtT1026AY.4.20.000217
ORF1ab/nsp12424V424VgtGgtT2123AY.390.000519
ORF1ab/nsp12424V424VgtGgtT723AY.50.000145
ORF1ab/nsp12424V424VgtGgtT2222B.1.5950.005741
ORF1ab/nsp12424V424VgtGgtT2121AY.260.000595
ORF1ab/nsp12424V424VgtGgtT2121B.1.1.4640.030928
ORF1ab/nsp12424V424VgtGgtT1919AY.590.010064
ORF1ab/nsp12424V424VgtGgtT1919B.1.4060.115152
ORF1ab/nsp12424V424VgtGgtT917B.1.1.5260.031915
ORF1ab/nsp12424V424VgtGgtT1717B.1.1600.00053
ORF1ab/nsp12424V424VgtGgtT1515B.1.5610.005955
ORF1ab/nsp12424V424VgtGgtT1214B.1.10.000218
ORF1ab/nsp12424V424VgtGgtT1212AY.98.10.000581
ORF1ab/nsp12424V424VgtGgtT1212B.1.4270.000606
ORF1ab/nsp12424V424VgtGgtT1111AY.60.000452
ORF1ab/nsp12424V424VgtGgtT1010AZ.30.015198
ORF1ab/nsp12424V424VgtGgtT1010B.1.360.001459
ORF1ab/nsp12424V424VgtGgtT89AY.230.000558
ORF1ab/nsp12424V424VgtGgtT99AY.290.000142
ORF1ab/nsp12424V424VgtGgtT99B.1.3510.000268
ORF1ab/nsp12424V424VgtGgtT99B.400.003279
ORF1ab/nsp12424V424VgtGgtT69P.1.140.000287
ORF1ab/nsp12424V424VgtGgtT88AY.140.000704
ORF1ab/nsp12424V424VgtGgtT88AY.610.000838
ORF1ab/nsp12424V424VgtGgtT88AY.90.000541
ORF1ab/nsp12424V424VgtGgtT88B.1.1.2220.001632
ORF1ab/nsp12424V424VgtGgtT88B.1.1.5190.000318
ORF1ab/nsp12424V424VgtGgtT77AY.1200.00026
ORF1ab/nsp12424V424VgtGgtT77AY.1210.000947
ORF1ab/nsp12424V424VgtGgtT67AY.30.00006
ORF1ab/nsp12424V424VgtGgtT77AY.620.00305
ORF1ab/nsp12424V424VgtGgtT67B.1.5260.000141
ORF1ab/nsp12424V424VgtGgtT77C.230.040698
ORF1ab/nsp12424V424VgtGgtT66AY.200.000233
ORF1ab/nsp12424V424VgtGgtT66AY.740.000694
ORF1ab/nsp12424V424VgtGgtT66B.1.1.3570.75
ORF1ab/nsp12424V424VgtGgtT66B.1.6210.000531
ORF1ab/nsp12424V424VgtGgtT45AY.580.00363
ORF1ab/nsp12424V424VgtGgtT55AY.850.002136
ORF1ab/nsp12424V424VgtGgtT55B.1.617.10.000645
ORF1ab/nsp12424V424VgtGgtT55B.1.6200.00473
ORF1ab/nsp12424V424VgtGgtT44AY.1170.000338
ORF1ab/nsp12424V424VgtGgtT34AY.460.000312
ORF1ab/nsp12424V424VgtGgtT44AY.680.001095
ORF1ab/nsp12424V424VgtGgtT44B.1.1.2530.010025
ORF1ab/nsp12424V424VgtGgtT44B.1.177.190.005722
ORF1ab/nsp12424V424VgtGgtT44B.1.177.60.003906
ORF1ab/nsp12424V424VgtGgtT44B.1.5170.001708
ORF1ab/nsp12424V424VgtGgtT44Q.40.001819
ORF1ab/nsp12424V424VgtGgtT33AY.1190.000106
ORF1ab/nsp12424V424VgtGgtT33AY.360.000445
ORF1ab/nsp12424V424VgtGgtT33AY.39.10.000119
ORF1ab/nsp12424V424VgtGgtT33AY.450.000365
ORF1ab/nsp12424V424VgtGgtT33AY.9.20.00011
ORF1ab/nsp12424V424VgtGgtT33AY.980.000237
ORF1ab/nsp12424V424VgtGgtT33B.1.1.1890.004539
ORF1ab/nsp12424V424VgtGgtT33B.1.1.330.001263
ORF1ab/nsp12424V424VgtGgtT33B.1.1.4090.008499
ORF1ab/nsp12424V424VgtGgtT33B.1.1.4220.136364
ORF1ab/nsp12424V424VgtGgtT23B.1.1.500.001358
ORF1ab/nsp12424V424VgtGgtT33B.1.1260.003827
ORF1ab/nsp12424V424VgtGgtT33B.1.2190.028302
ORF1ab/nsp12424V424VgtGgtT33B.1.3370.01676
ORF1ab/nsp12424V424VgtGgtT33B.1.351.30.002629
ORF1ab/nsp12424V424VgtGgtT33B.1.4040.003906
ORF1ab/nsp12424V424VgtGgtT33B.1.5640.001278
ORF1ab/nsp12424V424VgtGgtT33D.20.000225
ORF1ab/nsp12424V424VgtGgtT13P.1.120.000484
ORF1ab/nsp12424V424VgtGgtT22A.250.036364
ORF1ab/nsp12424V424VgtGgtT12AY.1000.000046
ORF1ab/nsp12424V424VgtGgtT22AY.270.000129
ORF1ab/nsp12424V424VgtGgtT22AY.330.000134
ORF1ab/nsp12424V424VgtGgtT22AY.350.000466
ORF1ab/nsp12424V424VgtGgtT22AY.4.2.10.000298
ORF1ab/nsp12424V424VgtGgtT22AY.4.50.000215
ORF1ab/nsp12424V424VgtGgtT22AY.420.00008
ORF1ab/nsp12424V424VgtGgtT22AY.46.20.001271
ORF1ab/nsp12424V424VgtGgtT22AY.470.000062
ORF1ab/nsp12424V424VgtGgtT22AY.550.001835
ORF1ab/nsp12424V424VgtGgtT12AY.750.000056
ORF1ab/nsp12424V424VgtGgtT22AY.920.000575
ORF1ab/nsp12424V424VgtGgtT22B.1.1.10.000653
ORF1ab/nsp12424V424VgtGgtT22B.1.1.250.001137
ORF1ab/nsp12424V424VgtGgtT22B.1.1.3480.001592
ORF1ab/nsp12424V424VgtGgtT22B.1.1.40.005952
ORF1ab/nsp12424V424VgtGgtT22B.1.177.210.000153
ORF1ab/nsp12424V424VgtGgtT22B.1.2210.000142
ORF1ab/nsp12424V424VgtGgtT12B.1.2430.00007
ORF1ab/nsp12424V424VgtGgtT22B.1.3350.020619
ORF1ab/nsp12424V424VgtGgtT22B.1.466.20.000782
ORF1ab/nsp12424V424VgtGgtT22B.1.5160.003914
ORF1ab/nsp12424V424VgtGgtT22C.36.30.001134
ORF1ab/nsp12424V424VgtGgtT22P.20.000373
ORF1ab/nsp12424V424VgtGgtT11AY.10.000396
ORF1ab/nsp12424V424VgtGgtT11AY.1060.000335
ORF1ab/nsp12424V424VgtGgtT11AY.1110.000183
ORF1ab/nsp12424V424VgtGgtT11AY.1130.000142
ORF1ab/nsp12424V424VgtGgtT11AY.120.10.000321
ORF1ab/nsp12424V424VgtGgtT11AY.120.20.001285
ORF1ab/nsp12424V424VgtGgtT11AY.16.10.00047
ORF1ab/nsp12424V424VgtGgtT11AY.3.10.000085
ORF1ab/nsp12424V424VgtGgtT11AY.380.000499
ORF1ab/nsp12424V424VgtGgtT11AY.46.10.001027
ORF1ab/nsp12424V424VgtGgtT11AY.46.50.000198
ORF1ab/nsp12424V424VgtGgtT11AY.46.60.000072
ORF1ab/nsp12424V424VgtGgtT11AY.5.40.000277
ORF1ab/nsp12424V424VgtGgtT11AY.560.001605
ORF1ab/nsp12424V424VgtGgtT11AY.640.000595
ORF1ab/nsp12424V424VgtGgtT11AY.650.000533
ORF1ab/nsp12424V424VgtGgtT11AY.660.00107
ORF1ab/nsp12424V424VgtGgtT11AY.7.10.000113
ORF1ab/nsp12424V424VgtGgtT11AY.700.000209
ORF1ab/nsp12424V424VgtGgtT11AY.75.10.00018
ORF1ab/nsp12424V424VgtGgtT11AY.9.10.000084
ORF1ab/nsp12424V424VgtGgtT11AY.900.000684
ORF1ab/nsp12424V424VgtGgtT11AY.99.20.000092
ORF1ab/nsp12424V424VgtGgtT11B0.000128
ORF1ab/nsp12424V424VgtGgtT11B.1.1.1180.010204
ORF1ab/nsp12424V424VgtGgtT11B.1.1.1700.001247
ORF1ab/nsp12424V424VgtGgtT11B.1.1.2140.000055
ORF1ab/nsp12424V424VgtGgtT11B.1.1.2190.005
ORF1ab/nsp12424V424VgtGgtT11B.1.1.2310.003096
ORF1ab/nsp12424V424VgtGgtT11B.1.1.280.000311
ORF1ab/nsp12424V424VgtGgtT11B.1.1.2820.011628
ORF1ab/nsp12424V424VgtGgtT11B.1.1.3170.000412
ORF1ab/nsp12424V424VgtGgtT11B.1.1.3740.002375
ORF1ab/nsp12424V424VgtGgtT11B.1.1.3980.003226
ORF1ab/nsp12424V424VgtGgtT11B.1.1.410.006329
ORF1ab/nsp12424V424VgtGgtT11B.1.1.4860.001577
ORF1ab/nsp12424V424VgtGgtT11B.1.1.630.000386
ORF1ab/nsp12424V424VgtGgtT11B.1.1390.000733
ORF1ab/nsp12424V424VgtGgtT11B.1.177.200.001517
ORF1ab/nsp12424V424VgtGgtT11B.1.177.230.003236
ORF1ab/nsp12424V424VgtGgtT11B.1.2320.000537
ORF1ab/nsp12424V424VgtGgtT11B.1.2400.000216
ORF1ab/nsp12424V424VgtGgtT11B.1.2410.000812
ORF1ab/nsp12424V424VgtGgtT11B.1.2580.000067
ORF1ab/nsp12424V424VgtGgtT11B.1.258.110.000396
ORF1ab/nsp12424V424VgtGgtT11B.1.2600.003344
ORF1ab/nsp12424V424VgtGgtT11B.1.351.20.000303
ORF1ab/nsp12424V424VgtGgtT11B.1.36.270.000763
ORF1ab/nsp12424V424VgtGgtT11B.1.36.360.000602
ORF1ab/nsp12424V424VgtGgtT11B.1.4160.001269
ORF1ab/nsp12424V424VgtGgtT11B.1.4620.007246
ORF1ab/nsp12424V424VgtGgtT11B.1.4970.000315
ORF1ab/nsp12424V424VgtGgtT11B.1.5580.004566
ORF1ab/nsp12424V424VgtGgtT11B.1.619.10.000641
ORF1ab/nsp12424V424VgtGgtT11B.1.621.10.000506
ORF1ab/nsp12424V424VgtGgtT11B.1.6360.006711
ORF1ab/nsp12424V424VgtGgtT11B.550.00295
ORF1ab/nsp12424V424VgtGgtT11C.10.002392
ORF1ab/nsp12424V424VgtGgtT11P.1.70.000319
ORF1ab/nsp12424V424VgtGgtT11Q.10.000126
ORF1ab/nsp12424V424VgtGgtT11Q.80.000165