CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 412 & Codon = Tcc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12412P412SP4804SnonsynCccTcc7446210.83467714674-14676

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12412P412SCccTcc621744All0.000119
ORF1ab/nsp12412P412SCccTcc163163AY.40.000254
ORF1ab/nsp12412P412SCccTcc9191B.1.617.20.000343
ORF1ab/nsp12412P412SCccTcc5151AY.1030.000317
ORF1ab/nsp12412P412SCccTcc3939B.1.617.10.00503
ORF1ab/nsp12412P412SCccTcc2828AY.440.00017
ORF1ab/nsp12412P412SCccTcc2222AY.430.000097
ORF1ab/nsp12412P412SCccTcc1515AY.200.000583
ORF1ab/nsp12412P412SCccTcc1313AY.1160.003728
ORF1ab/nsp12412P412SCccTcc1313AY.30.000129
ORF1ab/nsp12412P412SCccTcc1313AY.46.40.002139
ORF1ab/nsp12412P412SCccTcc1313B.1.20.000114
ORF1ab/nsp12412P412SCccTcc1010AY.250.00006
ORF1ab/nsp12412P412SCccTcc99AY.330.000601
ORF1ab/nsp12412P412SCccTcc88AY.98.10.000387
ORF1ab/nsp12412P412SCccTcc77AY.1110.001282
ORF1ab/nsp12412P412SCccTcc66AY.360.000889
ORF1ab/nsp12412P412SCccTcc66AY.470.000187
ORF1ab/nsp12412P412SCccTcc66AY.90.000406
ORF1ab/nsp12412P412SCccTcc66P.1.70.001916
ORF1ab/nsp12412P412SCccTcc55AY.1190.000177
ORF1ab/nsp12412P412SCccTcc55AY.290.000079
ORF1ab/nsp12412P412SCccTcc44AY.340.000388
ORF1ab/nsp12412P412SCccTcc44AY.390.000099
ORF1ab/nsp12412P412SCccTcc44AY.4.20.000087
ORF1ab/nsp12412P412SCccTcc44AY.50.000083
ORF1ab/nsp12412P412SCccTcc44AY.610.000419
ORF1ab/nsp12412P412SCccTcc44P.10.000063
ORF1ab/nsp12412P412SCccTcc33AY.1170.000254
ORF1ab/nsp12412P412SCccTcc33AY.260.000085
ORF1ab/nsp12412P412SCccTcc33AY.420.000121
ORF1ab/nsp12412P412SCccTcc33AY.530.000863
ORF1ab/nsp12412P412SCccTcc33AY.9.10.000251
ORF1ab/nsp12412P412SCccTcc33B.10.000027
ORF1ab/nsp12412P412SCccTcc23B.1.10.000036
ORF1ab/nsp12412P412SCccTcc33D.20.000225
ORF1ab/nsp12412P412SCccTcc22AY.1020.000053
ORF1ab/nsp12412P412SCccTcc22AY.230.000139
ORF1ab/nsp12412P412SCccTcc22AY.450.000243
ORF1ab/nsp12412P412SCccTcc22AY.60.000082
ORF1ab/nsp12412P412SCccTcc22AY.990.002099
ORF1ab/nsp12412P412SCccTcc22B.1.1.370.000386
ORF1ab/nsp12412P412SCccTcc22B.1.5960.000174
ORF1ab/nsp12412P412SCccTcc11AD.20.000219
ORF1ab/nsp12412P412SCccTcc11AY.1000.000046
ORF1ab/nsp12412P412SCccTcc11AY.1050.000643
ORF1ab/nsp12412P412SCccTcc11AY.1180.000063
ORF1ab/nsp12412P412SCccTcc11AY.16.10.00047
ORF1ab/nsp12412P412SCccTcc11AY.270.000065
ORF1ab/nsp12412P412SCccTcc11AY.39.10.00004
ORF1ab/nsp12412P412SCccTcc11AY.4.2.10.000149
ORF1ab/nsp12412P412SCccTcc11AY.4.40.000409
ORF1ab/nsp12412P412SCccTcc11AY.4.50.000107
ORF1ab/nsp12412P412SCccTcc11AY.460.000104
ORF1ab/nsp12412P412SCccTcc11AY.690.000187
ORF1ab/nsp12412P412SCccTcc11AY.7.10.000113
ORF1ab/nsp12412P412SCccTcc11AY.740.000116
ORF1ab/nsp12412P412SCccTcc11AY.750.000056
ORF1ab/nsp12412P412SCccTcc11AY.870.000833
ORF1ab/nsp12412P412SCccTcc11AY.9.20.000037
ORF1ab/nsp12412P412SCccTcc11B.1.1.1610.003534
ORF1ab/nsp12412P412SCccTcc11B.1.1.3110.000358
ORF1ab/nsp12412P412SCccTcc11B.1.1600.000031
ORF1ab/nsp12412P412SCccTcc11B.1.1770.000013
ORF1ab/nsp12412P412SCccTcc11B.1.177.440.000519
ORF1ab/nsp12412P412SCccTcc11B.1.177.480.003125
ORF1ab/nsp12412P412SCccTcc11B.1.2430.00007
ORF1ab/nsp12412P412SCccTcc11B.1.3510.00003
ORF1ab/nsp12412P412SCccTcc11B.1.3560.001727
ORF1ab/nsp12412P412SCccTcc11B.1.4270.00005
ORF1ab/nsp12412P412SCccTcc11B.1.5260.000024
ORF1ab/nsp12412P412SCccTcc11B.1.5700.002941
ORF1ab/nsp12412P412SCccTcc11C.310.017857
ORF1ab/nsp12412P412SCccTcc11P.1.10.000318