CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 401 & Codon = Ttt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12401L401FL4793FnonsynCttTtt419419114641-14643

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12401L401FCttTtt419419All0.00008
ORF1ab/nsp12401L401FCttTtt281281AY.40.000437
ORF1ab/nsp12401L401FCttTtt1717AY.1050.010932
ORF1ab/nsp12401L401FCttTtt1212B.1.617.20.000045
ORF1ab/nsp12401L401FCttTtt1010AY.1020.000265
ORF1ab/nsp12401L401FCttTtt99B.1.1.1570.008219
ORF1ab/nsp12401L401FCttTtt99B.1.1.5190.000357
ORF1ab/nsp12401L401FCttTtt88B.1.5950.002088
ORF1ab/nsp12401L401FCttTtt55AY.1030.000031
ORF1ab/nsp12401L401FCttTtt55AY.30.00005
ORF1ab/nsp12401L401FCttTtt55B.1.1770.000066
ORF1ab/nsp12401L401FCttTtt44AY.440.000024
ORF1ab/nsp12401L401FCttTtt33AY.250.000018
ORF1ab/nsp12401L401FCttTtt33AY.320.001597
ORF1ab/nsp12401L401FCttTtt33AY.390.000074
ORF1ab/nsp12401L401FCttTtt33AY.46.10.00308
ORF1ab/nsp12401L401FCttTtt33B.1.4290.000071
ORF1ab/nsp12401L401FCttTtt33B.1.5610.001191
ORF1ab/nsp12401L401FCttTtt22A.2.50.000998
ORF1ab/nsp12401L401FCttTtt22AY.1040.003968
ORF1ab/nsp12401L401FCttTtt22AY.1160.000574
ORF1ab/nsp12401L401FCttTtt22AY.290.000032
ORF1ab/nsp12401L401FCttTtt22B.1.10.000036
ORF1ab/nsp12401L401FCttTtt22B.1.20.000018
ORF1ab/nsp12401L401FCttTtt22B.1.6050.011905
ORF1ab/nsp12401L401FCttTtt22R.10.00018
ORF1ab/nsp12401L401FCttTtt11A.2.5.10.004808
ORF1ab/nsp12401L401FCttTtt11AY.1060.000335
ORF1ab/nsp12401L401FCttTtt11AY.140.000088
ORF1ab/nsp12401L401FCttTtt11AY.200.000039
ORF1ab/nsp12401L401FCttTtt11AY.330.000067
ORF1ab/nsp12401L401FCttTtt11AY.400.000964
ORF1ab/nsp12401L401FCttTtt11AY.430.000004
ORF1ab/nsp12401L401FCttTtt11AY.610.000105
ORF1ab/nsp12401L401FCttTtt11AY.90.000068
ORF1ab/nsp12401L401FCttTtt11AY.9.20.000037
ORF1ab/nsp12401L401FCttTtt11B0.000128
ORF1ab/nsp12401L401FCttTtt11B.10.000009
ORF1ab/nsp12401L401FCttTtt11B.1.1.580.005376
ORF1ab/nsp12401L401FCttTtt11B.1.1.70.000001
ORF1ab/nsp12401L401FCttTtt11B.1.177.210.000076
ORF1ab/nsp12401L401FCttTtt11B.1.2650.001271
ORF1ab/nsp12401L401FCttTtt11B.1.36.380.001642
ORF1ab/nsp12401L401FCttTtt11B.1.3770.004566
ORF1ab/nsp12401L401FCttTtt11B.280.003279
ORF1ab/nsp12401L401FCttTtt11D.20.000075