CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 399 & Codon = gcC

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12399A399AA4791AsyngcTgcC4401390.31590914635-14637

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12399A399AgcTgcC139440All0.000027
ORF1ab/nsp12399A399AgcTgcC1742B.1.1.70.000015
ORF1ab/nsp12399A399AgcTgcC1828B.1.617.20.000068
ORF1ab/nsp12399A399AgcTgcC2627AY.430.000115
ORF1ab/nsp12399A399AgcTgcC1218AY.40.000019
ORF1ab/nsp12399A399AgcTgcC1212B.1.177.350.008293
ORF1ab/nsp12399A399AgcTgcC48AY.1020.000106
ORF1ab/nsp12399A399AgcTgcC47AY.440.000024
ORF1ab/nsp12399A399AgcTgcC77AY.50.000145
ORF1ab/nsp12399A399AgcTgcC17B.10.000009
ORF1ab/nsp12399A399AgcTgcC77B.1.177.420.006261
ORF1ab/nsp12399A399AgcTgcC26B.1.20.000018
ORF1ab/nsp12399A399AgcTgcC15AY.1030.000006
ORF1ab/nsp12399A399AgcTgcC55AY.46.60.000361
ORF1ab/nsp12399A399AgcTgcC13AY.250.000006
ORF1ab/nsp12399A399AgcTgcC23AY.290.000032
ORF1ab/nsp12399A399AgcTgcC23B.1.5260.000047
ORF1ab/nsp12399A399AgcTgcC33B.400.001093
ORF1ab/nsp12399A399AgcTgcC22AY.280.003781
ORF1ab/nsp12399A399AgcTgcC11AY.1190.000035
ORF1ab/nsp12399A399AgcTgcC11AY.260.000028
ORF1ab/nsp12399A399AgcTgcC11AY.390.000025
ORF1ab/nsp12399A399AgcTgcC11AY.4.2.10.000149
ORF1ab/nsp12399A399AgcTgcC11AY.450.000122
ORF1ab/nsp12399A399AgcTgcC11AY.690.000187
ORF1ab/nsp12399A399AgcTgcC11AY.770.001127
ORF1ab/nsp12399A399AgcTgcC11B.1.1.330.000421
ORF1ab/nsp12399A399AgcTgcC11B.1.1.4160.000905
ORF1ab/nsp12399A399AgcTgcC11B.1.177.560.000668
ORF1ab/nsp12399A399AgcTgcC11B.1.360.000146
ORF1ab/nsp12399A399AgcTgcC11B.1.5090.000866
ORF1ab/nsp12399A399AgcTgcC11B.1.5950.000261