CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 399 & Codon = gcA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12399A399AA4791AsyngcTgcA4402700.61363614635-14637

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12399A399AgcTgcA270440All0.000052
ORF1ab/nsp12399A399AgcTgcA156156B.1.160.121
ORF1ab/nsp12399A399AgcTgcA1842B.1.1.70.000016
ORF1ab/nsp12399A399AgcTgcA228B.1.617.20.000008
ORF1ab/nsp12399A399AgcTgcA127AY.430.000004
ORF1ab/nsp12399A399AgcTgcA2727B.1.1600.000842
ORF1ab/nsp12399A399AgcTgcA518AY.40.000008
ORF1ab/nsp12399A399AgcTgcA38AY.1020.00008
ORF1ab/nsp12399A399AgcTgcA88B.1.1.3540.035088
ORF1ab/nsp12399A399AgcTgcA37AY.440.000018
ORF1ab/nsp12399A399AgcTgcA57B.10.000046
ORF1ab/nsp12399A399AgcTgcA36B.1.20.000026
ORF1ab/nsp12399A399AgcTgcA45AY.1030.000025
ORF1ab/nsp12399A399AgcTgcA44AY.39.10.000158
ORF1ab/nsp12399A399AgcTgcA44B.1.1770.000053
ORF1ab/nsp12399A399AgcTgcA44B.1.4270.000202
ORF1ab/nsp12399A399AgcTgcA23AY.250.000012
ORF1ab/nsp12399A399AgcTgcA13AY.290.000016
ORF1ab/nsp12399A399AgcTgcA13B.1.5260.000024
ORF1ab/nsp12399A399AgcTgcA12AY.30.00001
ORF1ab/nsp12399A399AgcTgcA22B.1.1.370.000386
ORF1ab/nsp12399A399AgcTgcA11A.23.10.000704
ORF1ab/nsp12399A399AgcTgcA11AY.1150.005208
ORF1ab/nsp12399A399AgcTgcA11AY.1160.000287
ORF1ab/nsp12399A399AgcTgcA11AY.1170.000085
ORF1ab/nsp12399A399AgcTgcA11AY.270.000065
ORF1ab/nsp12399A399AgcTgcA11B.1.10.000018
ORF1ab/nsp12399A399AgcTgcA11B.1.1.4490.022727
ORF1ab/nsp12399A399AgcTgcA11B.1.1.5190.00004
ORF1ab/nsp12399A399AgcTgcA11B.1.160.260.002421
ORF1ab/nsp12399A399AgcTgcA11B.1.177.440.000519
ORF1ab/nsp12399A399AgcTgcA11B.1.2210.000071
ORF1ab/nsp12399A399AgcTgcA11B.1.258.170.000104
ORF1ab/nsp12399A399AgcTgcA11B.1.3510.00003
ORF1ab/nsp12399A399AgcTgcA11B.1.4290.000024
ORF1ab/nsp12399A399AgcTgcA11D.20.000075
ORF1ab/nsp12399A399AgcTgcA11P.1.170.000162