CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 382

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12382A382VA4774VnonsyngCtgTt347334700.99913614584-14586
ORF1ab/nsp12382A382VA4774VnonsyngCTgTA347320.00057587114584-14586
ORF1ab/nsp12382A382VA4774VnonsyngCTgTG347310.00028793614584-14586
ORF1ab/nsp12382A382TA4774TnonsynGctAct174017390.99942514584-14586
ORF1ab/nsp12382A382TA4774TnonsynGcTAcG174010.00057471314584-14586
ORF1ab/nsp12382A382AA4774AsyngcTgcC4462750.61659214584-14586
ORF1ab/nsp12382A382AA4774AsyngcTgcA4461550.34753414584-14586
ORF1ab/nsp12382A382AA4774AsyngcTgcG446160.035874414584-14586
ORF1ab/nsp12382A382SA4774SnonsynGctTct87830.95402314584-14586
ORF1ab/nsp12382A382SA4774SnonsynGcTTcA8740.04597714584-14586
ORF1ab/nsp12382A382delA4774deldelGCT---8585114584-14586
ORF1ab/nsp12382A382PA4774PnonsynGctCct1070.714584-14586
ORF1ab/nsp12382A382PA4774PnonsynGcTCcA1010.114584-14586
ORF1ab/nsp12382A382PA4774PnonsynGcTCcG1010.114584-14586
ORF1ab/nsp12382A382PA4774PnonsynGcTCcC1010.114584-14586
ORF1ab/nsp12382A382DA4774DnonsyngCtgAt88114584-14586
ORF1ab/nsp12382A382LA4774LnonsynGCTTTA420.514584-14586
ORF1ab/nsp12382A382LA4774LnonsynGCtCTt410.2514584-14586
ORF1ab/nsp12382A382LA4774LnonsynGCTCTG410.2514584-14586
ORF1ab/nsp12382A382GA4774GnonsyngCtgGt33114584-14586
ORF1ab/nsp12382A382YA4774YnonsynGCtTAt33114584-14586
ORF1ab/nsp12382A382FA4774FnonsynGCtTTt33114584-14586
ORF1ab/nsp12382A382del1A4774del1delgCtg-t22114584-14586
ORF1ab/nsp12382A382XA4774XnonsynGCTTAA22114584-14586
ORF1ab/nsp12382A382EA4774EnonsyngCTgAA22114584-14586
ORF1ab/nsp12382A382HA4774HnonsynGCTCAC11114584-14586
ORF1ab/nsp12382A382MA4774MnonsynGCTATG11114584-14586
ORF1ab/nsp12382A382IA4774InonsynGCtATt11114584-14586

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12382A382VgCtgTt34703473All0.000664
ORF1ab/nsp12382A382VgCTgTA23473All0
ORF1ab/nsp12382A382VgCTgTG13473All0
ORF1ab/nsp12382A382TGctAct17391740All0.000333
ORF1ab/nsp12382A382TGcTAcG11740All0
ORF1ab/nsp12382A382VgCtgTt837837AY.40.001303
ORF1ab/nsp12382A382TGctAct693693B.1.1.4330.987179
ORF1ab/nsp12382A382AgcTgcC275446All0.000053
ORF1ab/nsp12382A382AgcTgcA155446All0.00003
ORF1ab/nsp12382A382AgcTgcG16446All0.000003
ORF1ab/nsp12382A382TGctAct395395AY.1030.002453
ORF1ab/nsp12382A382VgCtgTt317317B.1.617.20.001194
ORF1ab/nsp12382A382VgCtgTt233234B.1.1.70.000209
ORF1ab/nsp12382A382VgCTgTA1234B.1.1.70.000001
ORF1ab/nsp12382A382AgcTgcC133183B.1.1.70.000119
ORF1ab/nsp12382A382AgcTgcA50183B.1.1.70.000045
ORF1ab/nsp12382A382VgCtgTt169169AY.1020.004481
ORF1ab/nsp12382A382VgCtgTt169169AY.250.001017
ORF1ab/nsp12382A382VgCtgTt119119B.1.20.001048
ORF1ab/nsp12382A382VgCtgTt118118AY.30.001174
ORF1ab/nsp12382A382VgCtgTt114114B.1.1.2140.006322
ORF1ab/nsp12382A382VgCtgTt9494B.10.000861
ORF1ab/nsp12382A382SGctTct8387All0.000016
ORF1ab/nsp12382A382SGcTTcA487All0.000001
ORF1ab/nsp12382A382delGCT---8585All0.000016
ORF1ab/nsp12382A382TGctAct8585B.1.1.70.000076
ORF1ab/nsp12382A382VgCtgTt8484AY.1030.000522
ORF1ab/nsp12382A382TGctAct7979AY.46.60.005704
ORF1ab/nsp12382A382VgCtgTt7575AY.440.000457
ORF1ab/nsp12382A382VgCtgTt6969AY.430.000306
ORF1ab/nsp12382A382VgCtgTt5656AY.4.20.001215
ORF1ab/nsp12382A382VgCtgTt5050AY.390.001236
ORF1ab/nsp12382A382VgCtgTt5050B.1.1.5190.001986
ORF1ab/nsp12382A382TGctAct4949B.1.617.20.000185
ORF1ab/nsp12382A382VgCtgTt4747B.1.1770.000619
ORF1ab/nsp12382A382TGctAct4646B.1.5770.031615
ORF1ab/nsp12382A382TGctAct4444AY.40.000068
ORF1ab/nsp12382A382TGctAct4242P.10.000662
ORF1ab/nsp12382A382VgCtgTt3939AY.200.001516
ORF1ab/nsp12382A382delGCT---3636B.1.1.70.000032
ORF1ab/nsp12382A382VgCtgTt3535AY.46.60.002527
ORF1ab/nsp12382A382VgCtgTt3434AY.1200.001264
ORF1ab/nsp12382A382VgCtgTt3333B.1.2210.002344
ORF1ab/nsp12382A382VgCtgTt2929B.1.3340.527273
ORF1ab/nsp12382A382VgCtgTt2929R.10.00261
ORF1ab/nsp12382A382AgcTgcC1825AY.40.000028
ORF1ab/nsp12382A382AgcTgcA725AY.40.000011
ORF1ab/nsp12382A382VgCtgTt2525AY.5.30.008435
ORF1ab/nsp12382A382VgCtgTt2424AY.50.000496
ORF1ab/nsp12382A382VgCtgTt2222C.390.415094
ORF1ab/nsp12382A382TGctAct2121B.1.20.000185
ORF1ab/nsp12382A382AgcTgcA1121B.1.617.20.000041
ORF1ab/nsp12382A382AgcTgcC1021B.1.617.20.000038
ORF1ab/nsp12382A382VgCtgTt2020AY.3.10.001705
ORF1ab/nsp12382A382TGctAct2020AY.440.000122
ORF1ab/nsp12382A382VgCtgTt2020AY.540.001907
ORF1ab/nsp12382A382VgCtgTt2020B.1.10.000363
ORF1ab/nsp12382A382TGctAct2020B.1.1600.000624
ORF1ab/nsp12382A382VgCtgTt1919AY.290.0003
ORF1ab/nsp12382A382VgCtgTt1919AY.750.001064
ORF1ab/nsp12382A382TGctAct1717AY.250.000102
ORF1ab/nsp12382A382TGctAct1717B.1.5950.004436
ORF1ab/nsp12382A382TGctAct1616B.1.10.00029
ORF1ab/nsp12382A382VgCtgTt1616B.1.3510.000476
ORF1ab/nsp12382A382VgCtgTt1515AY.470.000467
ORF1ab/nsp12382A382TGctAct1515B.10.000137
ORF1ab/nsp12382A382SGctTct1215B.1.1.70.000011
ORF1ab/nsp12382A382SGcTTcA315B.1.1.70.000003
ORF1ab/nsp12382A382VgCtgTt1515B.1.1600.000468
ORF1ab/nsp12382A382AgcTgcG1415B.1.2210.000994
ORF1ab/nsp12382A382AgcTgcC115B.1.2210.000071
ORF1ab/nsp12382A382AgcTgcA1314AY.1030.000081
ORF1ab/nsp12382A382AgcTgcC114AY.1030.000006
ORF1ab/nsp12382A382VgCtgTt1313AY.1000.000598
ORF1ab/nsp12382A382TGctAct1313AY.430.000058
ORF1ab/nsp12382A382VgCtgTt1313B.1.160.140.027542
ORF1ab/nsp12382A382AgcTgcA812AY.250.000048
ORF1ab/nsp12382A382AgcTgcC412AY.250.000024
ORF1ab/nsp12382A382VgCtgTt1212AY.550.011009
ORF1ab/nsp12382A382AgcTgcA1212B.1.1770.000158
ORF1ab/nsp12382A382VgCtgTt1212B.1.36.360.007225
ORF1ab/nsp12382A382VgCtgTt1212B.1.4290.000282
ORF1ab/nsp12382A382VgCtgTt1212B.1.5820.005888
ORF1ab/nsp12382A382VgCtgTt1111AY.99.20.001014
ORF1ab/nsp12382A382AgcTgcC1111B.1.1.3170.004529
ORF1ab/nsp12382A382PGctCct710All0.000001
ORF1ab/nsp12382A382PGcTCcG110All0
ORF1ab/nsp12382A382PGcTCcC110All0
ORF1ab/nsp12382A382PGcTCcA110All0
ORF1ab/nsp12382A382VgCtgTt1010AY.1190.000353
ORF1ab/nsp12382A382VgCtgTt1010AY.230.000697
ORF1ab/nsp12382A382TGctAct1010AY.30.000099
ORF1ab/nsp12382A382VgCtgTt1010AY.610.001048
ORF1ab/nsp12382A382AgcTgcC910B.1.1.5190.000357
ORF1ab/nsp12382A382AgcTgcA110B.1.1.5190.00004
ORF1ab/nsp12382A382AgcTgcA910B.1.4290.000212
ORF1ab/nsp12382A382AgcTgcC110B.1.4290.000024
ORF1ab/nsp12382A382VgCtgTt99AY.1170.000761
ORF1ab/nsp12382A382AgcTgcA59B.1.20.000044
ORF1ab/nsp12382A382AgcTgcC49B.1.20.000035
ORF1ab/nsp12382A382AgcTgcC89B.1.5250.000905
ORF1ab/nsp12382A382AgcTgcG19B.1.5250.000113
ORF1ab/nsp12382A382VgCtgTt99P.10.000142
ORF1ab/nsp12382A382DgCtgAt88All0.000002
ORF1ab/nsp12382A382VgCtgTt88AY.1140.001849
ORF1ab/nsp12382A382SGctTct88AY.30.00008
ORF1ab/nsp12382A382SGctTct88AY.40.000012
ORF1ab/nsp12382A382VgCtgTt88AY.420.000322
ORF1ab/nsp12382A382SGctTct88B.1.617.20.00003
ORF1ab/nsp12382A382VgCtgTt77AY.120.10.002247
ORF1ab/nsp12382A382AgcTgcC67AY.30.00006
ORF1ab/nsp12382A382AgcTgcA17AY.30.00001
ORF1ab/nsp12382A382VgCtgTt77AY.4.50.000752
ORF1ab/nsp12382A382VgCtgTt77AY.980.000553
ORF1ab/nsp12382A382VgCtgTt77AY.98.10.000339
ORF1ab/nsp12382A382delGCT---77B.10.000064
ORF1ab/nsp12382A382VgCtgTt77B.1.3750.005738
ORF1ab/nsp12382A382VgCtgTt77B.1.4350.079545
ORF1ab/nsp12382A382TGctAct77B.1.466.20.002739
ORF1ab/nsp12382A382VgCtgTt77B.1.5610.002779
ORF1ab/nsp12382A382AgcTgcA66AY.1140.001387
ORF1ab/nsp12382A382TGctAct66AY.4.20.00013
ORF1ab/nsp12382A382VgCtgTt66AY.400.005786
ORF1ab/nsp12382A382SGctTct66AY.430.000027
ORF1ab/nsp12382A382VgCtgTt66AY.450.00073
ORF1ab/nsp12382A382VgCtgTt66AY.460.000624
ORF1ab/nsp12382A382VgCtgTt66AY.740.000694
ORF1ab/nsp12382A382VgCtgTt66AY.9.10.000502
ORF1ab/nsp12382A382TGctAct66B.1.4270.000303
ORF1ab/nsp12382A382TGctAct66Q.40.002729
ORF1ab/nsp12382A382AgcTgcC55AY.1020.000133
ORF1ab/nsp12382A382VgCtgTt55AY.1210.000677
ORF1ab/nsp12382A382delGCT---55AY.250.00003
ORF1ab/nsp12382A382VgCtgTt55AY.260.000142
ORF1ab/nsp12382A382VgCtgTt55AY.270.000324
ORF1ab/nsp12382A382AgcTgcC55AY.390.000124
ORF1ab/nsp12382A382TGctAct55AY.4.50.000537
ORF1ab/nsp12382A382AgcTgcC45AY.440.000024
ORF1ab/nsp12382A382AgcTgcA15AY.440.000006
ORF1ab/nsp12382A382TGctAct55AY.50.000103
ORF1ab/nsp12382A382AgcTgcC55AY.610.000524
ORF1ab/nsp12382A382VgCtgTt55AY.75.10.000902
ORF1ab/nsp12382A382SGctTct55AY.98.10.000242
ORF1ab/nsp12382A382SGctTct55B.10.000046
ORF1ab/nsp12382A382AgcTgcC45B.10.000037
ORF1ab/nsp12382A382PGctCct35B.10.000027
ORF1ab/nsp12382A382PGcTCcC15B.10.000009
ORF1ab/nsp12382A382AgcTgcA15B.10.000009
ORF1ab/nsp12382A382PGcTCcA15B.10.000009
ORF1ab/nsp12382A382VgCtgTt55B.1.1.10.001633
ORF1ab/nsp12382A382VgCtgTt55B.1.3490.003574
ORF1ab/nsp12382A382AgcTgcC35B.1.3510.000089
ORF1ab/nsp12382A382AgcTgcA25B.1.3510.000059
ORF1ab/nsp12382A382TGctAct55D.20.000375
ORF1ab/nsp12382A382AgcTgcC45P.10.000063
ORF1ab/nsp12382A382AgcTgcA15P.10.000016
ORF1ab/nsp12382A382VgCtgTt44A0.001548
ORF1ab/nsp12382A382LGCTTTA24All0
ORF1ab/nsp12382A382LGCTCTG14All0
ORF1ab/nsp12382A382LGCtCTt14All0
ORF1ab/nsp12382A382TGctAct44AY.1000.000184
ORF1ab/nsp12382A382TGctAct44AY.1190.000141
ORF1ab/nsp12382A382VgCtgTt44AY.220.008368
ORF1ab/nsp12382A382VgCtgTt44AY.39.10.000158
ORF1ab/nsp12382A382TGctAct44AY.460.000416
ORF1ab/nsp12382A382VgCtgTt44AY.46.20.002541
ORF1ab/nsp12382A382VgCtgTt44AY.690.000747
ORF1ab/nsp12382A382AgcTgcC24B.1.10.000036
ORF1ab/nsp12382A382AgcTgcA24B.1.10.000036
ORF1ab/nsp12382A382AgcTgcA34B.1.1.2220.000612
ORF1ab/nsp12382A382AgcTgcC14B.1.1.2220.000204
ORF1ab/nsp12382A382TGctAct44B.1.1.3330.004306
ORF1ab/nsp12382A382TGctAct44B.1.1.4860.006309
ORF1ab/nsp12382A382DgCtgAt44B.1.1.70.000004
ORF1ab/nsp12382A382TGctAct44B.1.258.30.0067
ORF1ab/nsp12382A382AgcTgcC44B.1.360.000584
ORF1ab/nsp12382A382VgCtgTt44B.1.438.10.000429
ORF1ab/nsp12382A382VgCtgTt44B.1.5960.000349
ORF1ab/nsp12382A382TGctAct44P.1.10.001271
ORF1ab/nsp12382A382YGCtTAt33All0.000001
ORF1ab/nsp12382A382FGCtTTt33All0.000001
ORF1ab/nsp12382A382GgCtgGt33All0.000001
ORF1ab/nsp12382A382SGctTct33AY.1030.000019
ORF1ab/nsp12382A382VgCtgTt33AY.1060.001005
ORF1ab/nsp12382A382TGctAct33AY.130.000483
ORF1ab/nsp12382A382VgCtgTt33AY.190.003421
ORF1ab/nsp12382A382TGctAct33AY.230.000209
ORF1ab/nsp12382A382VgCtgTt33AY.29.10.000662
ORF1ab/nsp12382A382VgCtgTt33AY.330.0002
ORF1ab/nsp12382A382VgCtgTt33AY.360.000445
ORF1ab/nsp12382A382delGCT---33AY.4.50.000322
ORF1ab/nsp12382A382delGCT---33AY.430.000013
ORF1ab/nsp12382A382TGctAct33AY.540.000286
ORF1ab/nsp12382A382VgCtgTt33AY.640.001786
ORF1ab/nsp12382A382VgCtgTt33AY.680.000821
ORF1ab/nsp12382A382VgCtgTt33AY.950.002283
ORF1ab/nsp12382A382VgCtgTt33B.1.1.2940.003797
ORF1ab/nsp12382A382YGCtTAt33B.1.1.70.000003
ORF1ab/nsp12382A382TGctAct33B.1.110.30.002155
ORF1ab/nsp12382A382VgCtgTt33B.1.2390.003663
ORF1ab/nsp12382A382TGctAct33B.1.3670.002377
ORF1ab/nsp12382A382VgCtgTt33B.1.4280.003061
ORF1ab/nsp12382A382VgCtgTt23B.1.5760.001813
ORF1ab/nsp12382A382VgCTgTA13B.1.5760.000907
ORF1ab/nsp12382A382VgCtgTt33B.1.6310.010101
ORF1ab/nsp12382A382TGctAct33B.1.6370.000219
ORF1ab/nsp12382A382VgCtgTt33C.36.30.001702
ORF1ab/nsp12382A382VgCtgTt33P.1.140.000143
ORF1ab/nsp12382A382AgcTgcA23P.1.140.000096
ORF1ab/nsp12382A382AgcTgcG13P.1.140.000048
ORF1ab/nsp12382A382VgCtgTt22A.2.50.000998
ORF1ab/nsp12382A382del1gCtg-t22All0
ORF1ab/nsp12382A382EgCTgAA22All0
ORF1ab/nsp12382A382XGCTTAA22All0
ORF1ab/nsp12382A382VgCtgTt22AY.10.000791
ORF1ab/nsp12382A382TGctAct22AY.1020.000053
ORF1ab/nsp12382A382SGctTct22AY.1020.000053
ORF1ab/nsp12382A382delGCT---22AY.1030.000012
ORF1ab/nsp12382A382VgCtgTt22AY.1090.001479
ORF1ab/nsp12382A382VgCtgTt22AY.1110.000366
ORF1ab/nsp12382A382AgcTgcC22AY.1160.000574
ORF1ab/nsp12382A382AgcTgcC22AY.116.10.000623
ORF1ab/nsp12382A382VgCtgTt22AY.1180.000125
ORF1ab/nsp12382A382AgcTgcA22AY.1190.000071
ORF1ab/nsp12382A382AgcTgcA22AY.20.000712
ORF1ab/nsp12382A382TGctAct22AY.200.000078
ORF1ab/nsp12382A382TGctAct22AY.260.000057
ORF1ab/nsp12382A382SGctTct22AY.330.000134
ORF1ab/nsp12382A382VgCtgTt22AY.340.000194
ORF1ab/nsp12382A382SGctTct22AY.390.000049
ORF1ab/nsp12382A382GgCtgGt22AY.40.000003
ORF1ab/nsp12382A382TGctAct22AY.4.2.10.000298
ORF1ab/nsp12382A382TGctAct22AY.420.00008
ORF1ab/nsp12382A382AgcTgcA12AY.430.000004
ORF1ab/nsp12382A382AgcTgcC12AY.430.000004
ORF1ab/nsp12382A382SGctTct22AY.440.000012
ORF1ab/nsp12382A382TGctAct22AY.450.000243
ORF1ab/nsp12382A382AgcTgcC22AY.46.40.000329
ORF1ab/nsp12382A382SGctTct22AY.470.000062
ORF1ab/nsp12382A382AgcTgcC22AY.50.000041
ORF1ab/nsp12382A382AgcTgcC22AY.500.001599
ORF1ab/nsp12382A382AgcTgcA22AY.510.001818
ORF1ab/nsp12382A382AgcTgcA22AY.540.000191
ORF1ab/nsp12382A382TGctAct22AY.550.001835
ORF1ab/nsp12382A382SGctTct22AY.680.000547
ORF1ab/nsp12382A382VgCtgTt22AY.7.10.000225
ORF1ab/nsp12382A382AgcTgcC22AY.700.000417
ORF1ab/nsp12382A382TGctAct22AY.840.000875
ORF1ab/nsp12382A382AgcTgcC22AY.840.000875
ORF1ab/nsp12382A382VgCtgTt22AY.850.000854
ORF1ab/nsp12382A382VgCtgTt22AY.9.20.000073
ORF1ab/nsp12382A382VgCtgTt22AY.910.001461
ORF1ab/nsp12382A382TGctAct22AY.920.000575
ORF1ab/nsp12382A382TGctAct22B0.000256
ORF1ab/nsp12382A382VgCtgTt22B0.000256
ORF1ab/nsp12382A382DgCtgAt22B.10.000018
ORF1ab/nsp12382A382delGCT---22B.1.10.000036
ORF1ab/nsp12382A382TGctAct22B.1.1.2140.000111
ORF1ab/nsp12382A382VgCtgTt22B.1.1.2220.000408
ORF1ab/nsp12382A382VgCtgTt22B.1.1.2690.002706
ORF1ab/nsp12382A382VgCtgTt22B.1.1.2840.000215
ORF1ab/nsp12382A382VgCtgTt22B.1.1.330.000842
ORF1ab/nsp12382A382FGCtTTt22B.1.1.70.000002
ORF1ab/nsp12382A382XGCTTAA22B.1.1.70.000002
ORF1ab/nsp12382A382EgCTgAA22B.1.1.70.000002
ORF1ab/nsp12382A382AgcTgcC22B.1.1110.00235
ORF1ab/nsp12382A382TGctAct22B.1.160.320.008584
ORF1ab/nsp12382A382TGctAct22B.1.1770.000026
ORF1ab/nsp12382A382VgCtgTt22B.1.177.40.000422
ORF1ab/nsp12382A382VgCtgTt22B.1.177.860.000367
ORF1ab/nsp12382A382TGctAct22B.1.2340.000264
ORF1ab/nsp12382A382TGctAct22B.1.2360.004107
ORF1ab/nsp12382A382TGctAct22B.1.2580.000133
ORF1ab/nsp12382A382VgCtgTt22B.1.36.290.001035
ORF1ab/nsp12382A382VgCtgTt22B.1.4040.002604
ORF1ab/nsp12382A382VgCtgTt22B.1.4270.000101
ORF1ab/nsp12382A382SGctTct22B.1.4270.000101
ORF1ab/nsp12382A382AgcTgcA12B.1.4270.00005
ORF1ab/nsp12382A382AgcTgcC12B.1.4270.00005
ORF1ab/nsp12382A382VgCtgTt22B.1.4990.002101
ORF1ab/nsp12382A382PGcTCcG12B.1.5250.000113
ORF1ab/nsp12382A382LGCTCTG12B.1.5250.000113
ORF1ab/nsp12382A382TGctAct12B.1.5250.000113
ORF1ab/nsp12382A382LGCtCTt12B.1.5250.000113
ORF1ab/nsp12382A382TGcTAcG12B.1.5250.000113
ORF1ab/nsp12382A382PGctCct12B.1.5250.000113
ORF1ab/nsp12382A382VgCtgTt12B.1.5250.000113
ORF1ab/nsp12382A382VgCTgTG12B.1.5250.000113
ORF1ab/nsp12382A382VgCtgTt22B.1.5260.000047
ORF1ab/nsp12382A382VgCtgTt22B.1.5700.005882
ORF1ab/nsp12382A382SGctTct12B.1.5760.000907
ORF1ab/nsp12382A382SGcTTcA12B.1.5760.000907
ORF1ab/nsp12382A382delGCT---22B.1.617.20.000008
ORF1ab/nsp12382A382SGctTct22B.1.621.10.001012
ORF1ab/nsp12382A382VgCtgTt22C.370.000232
ORF1ab/nsp12382A382TGctAct22C.370.000232
ORF1ab/nsp12382A382VgCtgTt22D.20.00015
ORF1ab/nsp12382A382VgCtgTt22N.30.011628
ORF1ab/nsp12382A382VgCtgTt22Q.80.00033
ORF1ab/nsp12382A382SGctTct22R.10.00018
ORF1ab/nsp12382A382delGCT---11A0.000387
ORF1ab/nsp12382A382VgCtgTt11A.23.10.000704
ORF1ab/nsp12382A382AgcTgcC11AD.20.000219
ORF1ab/nsp12382A382TGctAct11AD.20.000219
ORF1ab/nsp12382A382VgCtgTt11AE.50.018519
ORF1ab/nsp12382A382TGctAct11AE.80.000489
ORF1ab/nsp12382A382VgCtgTt11AL.10.012987
ORF1ab/nsp12382A382MGCTATG11All0
ORF1ab/nsp12382A382IGCtATt11All0
ORF1ab/nsp12382A382HGCTCAC11All0
ORF1ab/nsp12382A382PGctCct11AY.1030.000006
ORF1ab/nsp12382A382VgCtgTt11AY.1040.001984
ORF1ab/nsp12382A382delGCT---11AY.1110.000183
ORF1ab/nsp12382A382VgCtgTt11AY.1130.000142
ORF1ab/nsp12382A382VgCtgTt11AY.1160.000287
ORF1ab/nsp12382A382VgCtgTt11AY.120.000316
ORF1ab/nsp12382A382PGctCct11AY.1200.000037
ORF1ab/nsp12382A382TGctAct11AY.1200.000037
ORF1ab/nsp12382A382VgCtgTt11AY.120.20.001285
ORF1ab/nsp12382A382AgcTgcC11AY.1210.000135
ORF1ab/nsp12382A382VgCtgTt11AY.130.000161
ORF1ab/nsp12382A382VgCtgTt11AY.160.00038
ORF1ab/nsp12382A382AgcTgcC11AY.160.00038
ORF1ab/nsp12382A382VgCtgTt11AY.16.10.00047
ORF1ab/nsp12382A382AgcTgcC11AY.200.000039
ORF1ab/nsp12382A382SGctTct11AY.230.00007
ORF1ab/nsp12382A382delGCT---11AY.230.00007
ORF1ab/nsp12382A382VgCtgTt11AY.240.000431
ORF1ab/nsp12382A382SGctTct11AY.290.000016
ORF1ab/nsp12382A382VgCtgTt11AY.300.000396
ORF1ab/nsp12382A382VgCtgTt11AY.320.000532
ORF1ab/nsp12382A382VgCtgTt11AY.34.10.00051
ORF1ab/nsp12382A382TGctAct11AY.350.000233
ORF1ab/nsp12382A382AgcTgcA11AY.350.000233
ORF1ab/nsp12382A382VgCtgTt11AY.350.000233
ORF1ab/nsp12382A382TGctAct11AY.360.000148
ORF1ab/nsp12382A382TGctAct11AY.390.000025
ORF1ab/nsp12382A382delGCT---11AY.40.000002
ORF1ab/nsp12382A382SGctTct11AY.4.20.000022
ORF1ab/nsp12382A382VgCtgTt11AY.4.30.000842
ORF1ab/nsp12382A382VgCtgTt11AY.4.40.000409
ORF1ab/nsp12382A382del1gCtg-t11AY.430.000004
ORF1ab/nsp12382A382delGCT---11AY.450.000122
ORF1ab/nsp12382A382SGctTct11AY.460.000104
ORF1ab/nsp12382A382GgCtgGt11AY.460.000104
ORF1ab/nsp12382A382delGCT---11AY.46.20.000635
ORF1ab/nsp12382A382VgCtgTt11AY.46.40.000165
ORF1ab/nsp12382A382delGCT---11AY.470.000031
ORF1ab/nsp12382A382TGctAct11AY.470.000031
ORF1ab/nsp12382A382AgcTgcA11AY.470.000031
ORF1ab/nsp12382A382delGCT---11AY.5.30.000337
ORF1ab/nsp12382A382VgCtgTt11AY.500.000799
ORF1ab/nsp12382A382VgCtgTt11AY.510.000909
ORF1ab/nsp12382A382VgCtgTt11AY.520.000814
ORF1ab/nsp12382A382VgCtgTt11AY.560.001605
ORF1ab/nsp12382A382VgCtgTt11AY.580.000907
ORF1ab/nsp12382A382TGctAct11AY.590.00053
ORF1ab/nsp12382A382VgCtgTt11AY.590.00053
ORF1ab/nsp12382A382VgCtgTt11AY.60.000041
ORF1ab/nsp12382A382AgcTgcA11AY.60.000041
ORF1ab/nsp12382A382VgCtgTt11AY.630.000387
ORF1ab/nsp12382A382delGCT---11AY.650.000533
ORF1ab/nsp12382A382TGctAct11AY.660.00107
ORF1ab/nsp12382A382delGCT---11AY.660.00107
ORF1ab/nsp12382A382VgCtgTt11AY.700.000209
ORF1ab/nsp12382A382TGctAct11AY.730.000665
ORF1ab/nsp12382A382TGctAct11AY.740.000116
ORF1ab/nsp12382A382TGctAct11AY.750.000056
ORF1ab/nsp12382A382SGctTct11AY.750.000056
ORF1ab/nsp12382A382delGCT---11AY.75.10.00018
ORF1ab/nsp12382A382VgCtgTt11AY.770.001127
ORF1ab/nsp12382A382delGCT---11AY.770.001127
ORF1ab/nsp12382A382VgCtgTt11AY.790.001211
ORF1ab/nsp12382A382delGCT---11AY.90.000068
ORF1ab/nsp12382A382TGctAct11AY.90.000068
ORF1ab/nsp12382A382delGCT---11AY.9.20.000037
ORF1ab/nsp12382A382VgCtgTt11AY.900.000684
ORF1ab/nsp12382A382VgCtgTt11AY.940.000443
ORF1ab/nsp12382A382TGctAct11AY.980.000079
ORF1ab/nsp12382A382delGCT---11AY.990.001049
ORF1ab/nsp12382A382TGctAct11AY.990.001049
ORF1ab/nsp12382A382delGCT---11AY.99.10.001553
ORF1ab/nsp12382A382AgcTgcC11B0.000128
ORF1ab/nsp12382A382DgCtgAt11B.1.10.000018
ORF1ab/nsp12382A382SGctTct11B.1.10.000018
ORF1ab/nsp12382A382VgCtgTt11B.1.1.1920.002309
ORF1ab/nsp12382A382TGctAct11B.1.1.2170.003636
ORF1ab/nsp12382A382TGctAct11B.1.1.2220.000204
ORF1ab/nsp12382A382VgCtgTt11B.1.1.2410.00207
ORF1ab/nsp12382A382VgCtgTt11B.1.1.250.000569
ORF1ab/nsp12382A382TGctAct11B.1.1.250.000569
ORF1ab/nsp12382A382VgCtgTt11B.1.1.3060.000438
ORF1ab/nsp12382A382AgcTgcC11B.1.1.3340.016393
ORF1ab/nsp12382A382VgCtgTt11B.1.1.3690.000446
ORF1ab/nsp12382A382TGctAct11B.1.1.390.00051
ORF1ab/nsp12382A382AgcTgcC11B.1.1.410.006329
ORF1ab/nsp12382A382AgcTgcC11B.1.1.4480.002033
ORF1ab/nsp12382A382TGctAct11B.1.1.5140.038462
ORF1ab/nsp12382A382LGCTTTA11B.1.1.70.000001
ORF1ab/nsp12382A382delGCT---11B.1.1.700.000341
ORF1ab/nsp12382A382VgCtgTt11B.1.1110.001175
ORF1ab/nsp12382A382TGctAct11B.1.1390.000733
ORF1ab/nsp12382A382VgCtgTt11B.1.1470.000756
ORF1ab/nsp12382A382SGctTct11B.1.1600.000031
ORF1ab/nsp12382A382delGCT---11B.1.1600.000031
ORF1ab/nsp12382A382VgCtgTt11B.1.160.230.004831
ORF1ab/nsp12382A382TGctAct11B.1.160.280.002924
ORF1ab/nsp12382A382TGctAct11B.1.177.110.001698
ORF1ab/nsp12382A382TGctAct11B.1.177.120.000152
ORF1ab/nsp12382A382VgCtgTt11B.1.177.420.000894
ORF1ab/nsp12382A382VgCtgTt11B.1.177.50.001242
ORF1ab/nsp12382A382delGCT---11B.1.177.540.000606
ORF1ab/nsp12382A382VgCtgTt11B.1.177.60.000977
ORF1ab/nsp12382A382AgcTgcA11B.1.177.60.000977
ORF1ab/nsp12382A382VgCtgTt11B.1.177.600.000218
ORF1ab/nsp12382A382VgCtgTt11B.1.177.70.000165
ORF1ab/nsp12382A382VgCtgTt11B.1.177.730.000566
ORF1ab/nsp12382A382VgCtgTt11B.1.177.830.001481
ORF1ab/nsp12382A382VgCtgTt11B.1.177.870.000728
ORF1ab/nsp12382A382TGctAct11B.1.2210.000071
ORF1ab/nsp12382A382delGCT---11B.1.2210.000071
ORF1ab/nsp12382A382VgCtgTt11B.1.2340.000132
ORF1ab/nsp12382A382VgCtgTt11B.1.2580.000067
ORF1ab/nsp12382A382delGCT---11B.1.2580.000067
ORF1ab/nsp12382A382AgcTgcA11B.1.2580.000067
ORF1ab/nsp12382A382AgcTgcC11B.1.2680.010417
ORF1ab/nsp12382A382VgCtgTt11B.1.3110.000275
ORF1ab/nsp12382A382HGCTCAC11B.1.3110.000275
ORF1ab/nsp12382A382AgcTgcC11B.1.3360.002439
ORF1ab/nsp12382A382TGctAct11B.1.3510.00003
ORF1ab/nsp12382A382VgCtgTt11B.1.360.000146
ORF1ab/nsp12382A382AgcTgcA11B.1.3600.012658
ORF1ab/nsp12382A382VgCtgTt11B.1.3630.012987
ORF1ab/nsp12382A382VgCtgTt11B.1.3670.000792
ORF1ab/nsp12382A382VgCtgTt11B.1.3960.000706
ORF1ab/nsp12382A382TGctAct11B.1.4020.009804
ORF1ab/nsp12382A382VgCtgTt11B.1.4360.001029
ORF1ab/nsp12382A382AgcTgcC11B.1.4530.003236
ORF1ab/nsp12382A382AgcTgcA11B.1.466.20.000391
ORF1ab/nsp12382A382TGctAct11B.1.5170.000427
ORF1ab/nsp12382A382VgCtgTt11B.1.5170.000427
ORF1ab/nsp12382A382delGCT---11B.1.5250.000113
ORF1ab/nsp12382A382MGCTATG11B.1.5250.000113
ORF1ab/nsp12382A382IGCtATt11B.1.5250.000113
ORF1ab/nsp12382A382TGctAct11B.1.5260.000024
ORF1ab/nsp12382A382AgcTgcC11B.1.5510.00129
ORF1ab/nsp12382A382VgCtgTt11B.1.5600.00463
ORF1ab/nsp12382A382delGCT---11B.1.5610.000397
ORF1ab/nsp12382A382SGctTct11B.1.5670.003333
ORF1ab/nsp12382A382AgcTgcA11B.1.5760.000907
ORF1ab/nsp12382A382LGCTTTA11B.1.5760.000907
ORF1ab/nsp12382A382FGCtTTt11B.1.5760.000907
ORF1ab/nsp12382A382TGctAct11B.1.5890.007576
ORF1ab/nsp12382A382AgcTgcA11B.1.6000.005848
ORF1ab/nsp12382A382TGctAct11B.1.6090.000479
ORF1ab/nsp12382A382VgCtgTt11B.1.617.10.000129
ORF1ab/nsp12382A382del1gCtg-t11B.1.617.20.000004
ORF1ab/nsp12382A382DgCtgAt11B.1.617.20.000004
ORF1ab/nsp12382A382VgCtgTt11B.1.6200.000946
ORF1ab/nsp12382A382TGctAct11B.1.6210.000089
ORF1ab/nsp12382A382VgCtgTt11B.1.6280.000352
ORF1ab/nsp12382A382TGctAct11B.1.6280.000352
ORF1ab/nsp12382A382AgcTgcC11B.1.6360.006711
ORF1ab/nsp12382A382VgCtgTt11B.1.6370.000073
ORF1ab/nsp12382A382TGctAct11B.1.930.000934
ORF1ab/nsp12382A382VgCtgTt11B.110.005128
ORF1ab/nsp12382A382VgCtgTt11B.30.000831
ORF1ab/nsp12382A382VgCtgTt11B.310.003731
ORF1ab/nsp12382A382TGctAct11B.490.05
ORF1ab/nsp12382A382VgCtgTt11B.6.20.0625
ORF1ab/nsp12382A382SGctTct11D.20.000075
ORF1ab/nsp12382A382PGctCct11D.20.000075
ORF1ab/nsp12382A382VgCtgTt11N.50.001767
ORF1ab/nsp12382A382delGCT---11P.1.10.000318
ORF1ab/nsp12382A382VgCtgTt11P.1.120.000484
ORF1ab/nsp12382A382TGctAct11P.1.150.000232
ORF1ab/nsp12382A382VgCtgTt11P.20.000187
ORF1ab/nsp12382A382delGCT---11Q.20.000613
ORF1ab/nsp12382A382AgcTgcA11Q.40.000455
ORF1ab/nsp12382A382AgcTgcC11R.10.00009
ORF1ab/nsp12382A382VgCtgTt11Z.10.00289