CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 323 & Codon = TTt

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12323P323FP4715FnonsynCCtTTt13412134100.99985114407-14409

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12323P323FCCtTTt1341013412All0.002565
ORF1ab/nsp12323P323FCCtTTt87748774B.1.5250.992871
ORF1ab/nsp12323P323FCCtTTt841841B.1.20.007405
ORF1ab/nsp12323P323FCCtTTt641641AY.40.000998
ORF1ab/nsp12323P323FCCtTTt432432B.1.617.20.001627
ORF1ab/nsp12323P323FCCtTTt414414B.1.1.70.000371
ORF1ab/nsp12323P323FCCtTTt408408AY.430.001808
ORF1ab/nsp12323P323FCCtTTt184184AY.30.00183
ORF1ab/nsp12323P323FCCtTTt161161AY.290.00254
ORF1ab/nsp12323P323FCCtTTt103103B.10.000943
ORF1ab/nsp12323P323FCCtTTt102102AY.1110.018681
ORF1ab/nsp12323P323FCCtTTt9191B.1.5861
ORF1ab/nsp12323P323FCCtTTt7878AY.440.000475
ORF1ab/nsp12323P323FCCtTTt6363AY.1030.000391
ORF1ab/nsp12323P323FCCtTTt5656AY.1020.001485
ORF1ab/nsp12323P323FCCtTTt4343B.1.1770.000566
ORF1ab/nsp12323P323FCCtTTt4040AY.1170.003381
ORF1ab/nsp12323P323FCCtTTt3333AY.250.000198
ORF1ab/nsp12323P323FCCtTTt3232B.1.2430.002227
ORF1ab/nsp12323P323FCCtTTt3131B.1.4290.000729
ORF1ab/nsp12323P323FCCtTTt2727AY.230.001883
ORF1ab/nsp12323P323FCCtTTt2727AY.260.000764
ORF1ab/nsp12323P323FCCtTTt2727B.1.10.00049
ORF1ab/nsp12323P323FCCtTTt2626AY.470.000809
ORF1ab/nsp12323P323FCCtTTt2626B.1.2400.005605
ORF1ab/nsp12323P323FCCtTTt2424AY.390.000593
ORF1ab/nsp12323P323FCCtTTt2424B.1.3200.029888
ORF1ab/nsp12323P323FCCtTTt2323B.1.1.3170.009469
ORF1ab/nsp12323P323FCCtTTt2222P.10.000347
ORF1ab/nsp12323P323FCCtTTt2121AY.4.20.000455
ORF1ab/nsp12323P323FCCtTTt2121AY.460.002186
ORF1ab/nsp12323P323FCCtTTt1919AY.200.000738
ORF1ab/nsp12323P323FCCtTTt1919AY.34.10.009689
ORF1ab/nsp12323P323FCCtTTt1818B.1.6210.001593
ORF1ab/nsp12323P323FCCtTTt1616AY.3.10.001364
ORF1ab/nsp12323P323FCCtTTt1616AY.50.00033
ORF1ab/nsp12323P323FCCtTTt1515B.1.177.810.00284
ORF1ab/nsp12323P323FCCtTTt1515B.1.617.10.001934
ORF1ab/nsp12323P323FCCtTTt1414AY.46.40.002303
ORF1ab/nsp12323P323FCCtTTt1414B.1.3510.000416
ORF1ab/nsp12323P323FCCtTTt1414B.1.5960.00122
ORF1ab/nsp12323P323FCCtTTt1212B.1.1470.00907
ORF1ab/nsp12323P323FCCtTTt1010AY.130.00161
ORF1ab/nsp12323P323FCCtTTt1010B.1.36.180.004202
ORF1ab/nsp12323P323FCCtTTt99AY.360.001334
ORF1ab/nsp12323P323FCCtTTt99AY.5.40.00249
ORF1ab/nsp12323P323FCCtTTt99AY.520.007329
ORF1ab/nsp12323P323FCCtTTt99B.1.360.001313
ORF1ab/nsp12323P323FCCtTTt88AY.98.10.000387
ORF1ab/nsp12323P323FCCtTTt88B.1.1600.00025
ORF1ab/nsp12323P323FCCtTTt88B.1.36.10.009122
ORF1ab/nsp12323P323FCCtTTt88B.1.4270.000404
ORF1ab/nsp12323P323FCCtTTt570.277778
ORF1ab/nsp12323P323FCCtTTt77AY.120.002212
ORF1ab/nsp12323P323FCCtTTt77AY.1200.00026
ORF1ab/nsp12323P323FCCtTTt77AY.330.000467
ORF1ab/nsp12323P323FCCtTTt77AY.4.50.000752
ORF1ab/nsp12323P323FCCtTTt77B.1.1.2220.001428
ORF1ab/nsp12323P323FCCtTTt77B.1.5260.000165
ORF1ab/nsp12323P323FCCtTTt66AY.1000.000276
ORF1ab/nsp12323P323FCCtTTt66AY.1190.000212
ORF1ab/nsp12323P323FCCtTTt66AY.850.002563
ORF1ab/nsp12323P323FCCtTTt66AY.980.000474
ORF1ab/nsp12323P323FCCtTTt66AY.99.20.000553
ORF1ab/nsp12323P323FCCtTTt66B.1.1.2440.092308
ORF1ab/nsp12323P323FCCtTTt66B.1.177.210.000459
ORF1ab/nsp12323P323FCCtTTt66B.1.2580.000399
ORF1ab/nsp12323P323FCCtTTt66B.1.36.290.003104
ORF1ab/nsp12323P323FCCtTTt66B.1.3690.001711
ORF1ab/nsp12323P323FCCtTTt66B.1.4700.008427
ORF1ab/nsp12323P323FCCtTTt66B.1.4990.006303
ORF1ab/nsp12323P323FCCtTTt66P.1.160.002245
ORF1ab/nsp12323P323FCCtTTt55AY.1130.000712
ORF1ab/nsp12323P323FCCtTTt55AY.1160.001434
ORF1ab/nsp12323P323FCCtTTt55AY.1210.000677
ORF1ab/nsp12323P323FCCtTTt55AY.270.000324
ORF1ab/nsp12323P323FCCtTTt55AY.340.000485
ORF1ab/nsp12323P323FCCtTTt55AY.370.00158
ORF1ab/nsp12323P323FCCtTTt55AY.5.30.001687
ORF1ab/nsp12323P323FCCtTTt55AY.9.20.000184
ORF1ab/nsp12323P323FCCtTTt55B.1.1.5190.000199
ORF1ab/nsp12323P323FCCtTTt55C.370.00058
ORF1ab/nsp12323P323FCCtTTt44AY.1180.000251
ORF1ab/nsp12323P323FCCtTTt44AY.420.000161
ORF1ab/nsp12323P323FCCtTTt44AY.740.000463
ORF1ab/nsp12323P323FCCtTTt44AY.950.003044
ORF1ab/nsp12323P323FCCtTTt44B.1.1.3720.002755
ORF1ab/nsp12323P323FCCtTTt44B.1.3110.001098
ORF1ab/nsp12323P323FCCtTTt44B.1.5950.001044
ORF1ab/nsp12323P323FCCtTTt44P.1.140.000191
ORF1ab/nsp12323P323FCCtTTt33AY.100.00159
ORF1ab/nsp12323P323FCCtTTt33AY.29.10.000662
ORF1ab/nsp12323P323FCCtTTt33AY.39.10.000119
ORF1ab/nsp12323P323FCCtTTt33AY.570.001969
ORF1ab/nsp12323P323FCCtTTt33AY.60.000123
ORF1ab/nsp12323P323FCCtTTt33AY.840.001312
ORF1ab/nsp12323P323FCCtTTt33AY.920.000862
ORF1ab/nsp12323P323FCCtTTt33B.1.1.3010.003538
ORF1ab/nsp12323P323FCCtTTt33B.1.177.600.000655
ORF1ab/nsp12323P323FCCtTTt33B.1.595.40.021898
ORF1ab/nsp12323P323FCCtTTt33D.50.014925
ORF1ab/nsp12323P323FCCtTTt33P.1.100.000808
ORF1ab/nsp12323P323FCCtTTt33P.1.70.000958
ORF1ab/nsp12323P323FCCtTTt22AY.1090.001479
ORF1ab/nsp12323P323FCCtTTt22AY.300.000791
ORF1ab/nsp12323P323FCCtTTt22AY.350.000466
ORF1ab/nsp12323P323FCCtTTt22AY.4.2.10.000298
ORF1ab/nsp12323P323FCCtTTt22AY.480.00093
ORF1ab/nsp12323P323FCCtTTt22AY.540.000191
ORF1ab/nsp12323P323FCCtTTt22AY.700.000417
ORF1ab/nsp12323P323FCCtTTt22AY.790.002421
ORF1ab/nsp12323P323FCCtTTt22AY.90.000135
ORF1ab/nsp12323P323FCCtTTt22AY.900.001369
ORF1ab/nsp12323P323FCCtTTt22B.1.1.2070.002364
ORF1ab/nsp12323P323FCCtTTt22B.1.1.2650.006309
ORF1ab/nsp12323P323FCCtTTt22B.1.1.2690.002706
ORF1ab/nsp12323P323FCCtTTt22B.1.1.280.000622
ORF1ab/nsp12323P323FCCtTTt22B.1.1.3670.111111
ORF1ab/nsp12323P323FCCtTTt22B.1.1.5230.003125
ORF1ab/nsp12323P323FCCtTTt22B.1.177.120.000303
ORF1ab/nsp12323P323FCCtTTt22B.1.177.730.001133
ORF1ab/nsp12323P323FCCtTTt22B.1.6020.013072
ORF1ab/nsp12323P323FCCtTTt22P.1.170.000324
ORF1ab/nsp12323P323FCCtTTt22P.1.60.003891
ORF1ab/nsp12323P323FCCtTTt22P.20.000373
ORF1ab/nsp12323P323FCCtTTt11AY.1050.000643
ORF1ab/nsp12323P323FCCtTTt11AY.1140.000231
ORF1ab/nsp12323P323FCCtTTt11AY.120.2.10.000498
ORF1ab/nsp12323P323FCCtTTt11AY.140.000088
ORF1ab/nsp12323P323FCCtTTt11AY.210.001898
ORF1ab/nsp12323P323FCCtTTt11AY.450.000122
ORF1ab/nsp12323P323FCCtTTt11AY.46.20.000635
ORF1ab/nsp12323P323FCCtTTt11AY.46.60.000072
ORF1ab/nsp12323P323FCCtTTt11AY.670.000464
ORF1ab/nsp12323P323FCCtTTt11AY.680.000274
ORF1ab/nsp12323P323FCCtTTt11AY.690.000187
ORF1ab/nsp12323P323FCCtTTt11AY.710.000475
ORF1ab/nsp12323P323FCCtTTt11AY.720.001361
ORF1ab/nsp12323P323FCCtTTt11AY.770.001127
ORF1ab/nsp12323P323FCCtTTt11AY.80.000606
ORF1ab/nsp12323P323FCCtTTt11AY.820.001357
ORF1ab/nsp12323P323FCCtTTt11AY.9.2.10.001976
ORF1ab/nsp12323P323FCCtTTt11AY.940.000443
ORF1ab/nsp12323P323FCCtTTt11AY.960.002075
ORF1ab/nsp12323P323FCCtTTt11AZ.20.000821
ORF1ab/nsp12323P323FCCtTTt11B.1.1.10.000327
ORF1ab/nsp12323P323FCCtTTt11B.1.1.1360.021277
ORF1ab/nsp12323P323FCCtTTt11B.1.1.2140.000055
ORF1ab/nsp12323P323FCCtTTt11B.1.1.2210.010101
ORF1ab/nsp12323P323FCCtTTt11B.1.1.2370.005405
ORF1ab/nsp12323P323FCCtTTt11B.1.1.2770.000759
ORF1ab/nsp12323P323FCCtTTt11B.1.1.2840.000107
ORF1ab/nsp12323P323FCCtTTt11B.1.1.2940.001266
ORF1ab/nsp12323P323FCCtTTt11B.1.1.3180.000302
ORF1ab/nsp12323P323FCCtTTt11B.1.1.3490.010309
ORF1ab/nsp12323P323FCCtTTt11B.1.1.4110.014706
ORF1ab/nsp12323P323FCCtTTt11B.1.1.4160.000905
ORF1ab/nsp12323P323FCCtTTt11B.1.1.4480.002033
ORF1ab/nsp12323P323FCCtTTt11B.1.1280.000635
ORF1ab/nsp12323P323FCCtTTt11B.1.1310.008772
ORF1ab/nsp12323P323FCCtTTt11B.1.160.150.00495
ORF1ab/nsp12323P323FCCtTTt11B.1.160.320.004292
ORF1ab/nsp12323P323FCCtTTt11B.1.177.70.000165
ORF1ab/nsp12323P323FCCtTTt11B.1.177.820.000477
ORF1ab/nsp12323P323FCCtTTt11B.1.2140.003663
ORF1ab/nsp12323P323FCCtTTt11B.1.2210.000071
ORF1ab/nsp12323P323FCCtTTt11B.1.2340.000132
ORF1ab/nsp12323P323FCCtTTt11B.1.2410.000812
ORF1ab/nsp12323P323FCCtTTt11B.1.258.110.000396
ORF1ab/nsp12323P323FCCtTTt11B.1.3460.001311
ORF1ab/nsp12323P323FCCtTTt11B.1.351.20.000303
ORF1ab/nsp12323P323FCCtTTt11B.1.36.160.001425
ORF1ab/nsp12323P323FCCtTTt11B.1.36.270.000763
ORF1ab/nsp12323P323FCCtTTt11B.1.36.310.001751
ORF1ab/nsp12323P323FCCtTTt11B.1.3610.001289
ORF1ab/nsp12323P323FCCtTTt11B.1.3670.000792
ORF1ab/nsp12323P323FCCtTTt11B.1.3890.001002
ORF1ab/nsp12323P323FCCtTTt11B.1.4000.000429
ORF1ab/nsp12323P323FCCtTTt11B.1.4090.000781
ORF1ab/nsp12323P323FCCtTTt11B.1.438.10.000107
ORF1ab/nsp12323P323FCCtTTt11B.1.4510.008197
ORF1ab/nsp12323P323FCCtTTt11B.1.4560.003268
ORF1ab/nsp12323P323FCCtTTt11B.1.5090.000866
ORF1ab/nsp12323P323FCCtTTt11B.1.5710.009709
ORF1ab/nsp12323P323FCCtTTt11B.1.5820.000491
ORF1ab/nsp12323P323FCCtTTt11B.1.6250.002353
ORF1ab/nsp12323P323FCCtTTt11B.1.6370.000073
ORF1ab/nsp12323P323FCCtTTt11Q.10.000126
ORF1ab/nsp12323P323FCCtTTt11Q.40.000455
ORF1ab/nsp12323P323FCCtTTt11R.10.00009