CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 311 & Codon = gTa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12311A311VA4703VnonsyngCagTa2322310.9956914371-14373

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12311A311VgCagTa231232All0.000044
ORF1ab/nsp12311A311VgCagTa5555R.10.00495
ORF1ab/nsp12311A311VgCagTa2626B.1.1.70.000023
ORF1ab/nsp12311A311VgCagTa2222B.1.617.20.000083
ORF1ab/nsp12311A311VgCagTa1515AY.250.00009
ORF1ab/nsp12311A311VgCagTa1515AY.40.000023
ORF1ab/nsp12311A311VgCagTa1111AY.390.000272
ORF1ab/nsp12311A311VgCagTa88AY.440.000049
ORF1ab/nsp12311A311VgCagTa66AY.1030.000037
ORF1ab/nsp12311A311VgCagTa66AY.430.000027
ORF1ab/nsp12311A311VgCagTa66B.1.10.000109
ORF1ab/nsp12311A311VgCagTa66B.1.258.170.000624
ORF1ab/nsp12311A311VgCagTa66P.10.000095
ORF1ab/nsp12311A311VgCagTa44B.10.000037
ORF1ab/nsp12311A311VgCagTa33AY.290.000047
ORF1ab/nsp12311A311VgCagTa33AY.570.001969
ORF1ab/nsp12311A311VgCagTa22AY.1140.000462
ORF1ab/nsp12311A311VgCagTa22AY.200.000078
ORF1ab/nsp12311A311VgCagTa12AY.840.000437
ORF1ab/nsp12311A311VgCagTa22AY.99.20.000184
ORF1ab/nsp12311A311VgCagTa22B.1.1.4090.005666
ORF1ab/nsp12311A311VgCagTa11AY.1010.00049
ORF1ab/nsp12311A311VgCagTa11AY.1020.000027
ORF1ab/nsp12311A311VgCagTa11AY.1200.000037
ORF1ab/nsp12311A311VgCagTa11AY.240.000431
ORF1ab/nsp12311A311VgCagTa11AY.350.000233
ORF1ab/nsp12311A311VgCagTa11AY.460.000104
ORF1ab/nsp12311A311VgCagTa11AY.470.000031
ORF1ab/nsp12311A311VgCagTa11AY.550.000917
ORF1ab/nsp12311A311VgCagTa11AY.9.10.000084
ORF1ab/nsp12311A311VgCagTa11AY.9.20.000037
ORF1ab/nsp12311A311VgCagTa11AY.98.10.000048
ORF1ab/nsp12311A311VgCagTa11B.1.1.1530.001095
ORF1ab/nsp12311A311VgCagTa11B.1.1.3070.002532
ORF1ab/nsp12311A311VgCagTa11B.1.1.4340.000349
ORF1ab/nsp12311A311VgCagTa11B.1.1280.000635
ORF1ab/nsp12311A311VgCagTa11B.1.1770.000013
ORF1ab/nsp12311A311VgCagTa11B.1.177.820.000477
ORF1ab/nsp12311A311VgCagTa11B.1.20.000009
ORF1ab/nsp12311A311VgCagTa11B.1.2400.000216
ORF1ab/nsp12311A311VgCagTa11B.1.2410.000812
ORF1ab/nsp12311A311VgCagTa11B.1.2580.000067
ORF1ab/nsp12311A311VgCagTa11B.1.360.000146
ORF1ab/nsp12311A311VgCagTa11B.1.5260.000024
ORF1ab/nsp12311A311VgCagTa11B.1.5580.004566
ORF1ab/nsp12311A311VgCagTa11B.1.5950.000261
ORF1ab/nsp12311A311VgCagTa11C.350.000774
ORF1ab/nsp12311A311VgCagTa11C.37.10.002618
ORF1ab/nsp12311A311VgCagTa11D.20.000075
ORF1ab/nsp12311A311VgCagTa11D.30.005917
ORF1ab/nsp12311A311VgCagTa11P.1.130.000898