CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 300 & Codon = aaT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12300N300NN4692NsynaaCaaT1202112021114338-14340

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12300N300NaaCaaT1202112021All0.002299
ORF1ab/nsp12300N300NaaCaaT1107511075R.10.99685
ORF1ab/nsp12300N300NaaCaaT262262B.1.10.004753
ORF1ab/nsp12300N300NaaCaaT100100B.1.1.2200.185874
ORF1ab/nsp12300N300NaaCaaT8181B.10.000742
ORF1ab/nsp12300N300NaaCaaT6161B.1.1.70.000055
ORF1ab/nsp12300N300NaaCaaT5757B.1.617.20.000215
ORF1ab/nsp12300N300NaaCaaT5555AY.30.000547
ORF1ab/nsp12300N300NaaCaaT3939B.1.20.000343
ORF1ab/nsp12300N300NaaCaaT3434B.1.1.5250.185792
ORF1ab/nsp12300N300NaaCaaT2424AY.40.000037
ORF1ab/nsp12300N300NaaCaaT1717B.1.1.3170.006999
ORF1ab/nsp12300N300NaaCaaT1616B.1.1770.000211
ORF1ab/nsp12300N300NaaCaaT1414AY.1030.000087
ORF1ab/nsp12300N300NaaCaaT1414B.1.4160.017766
ORF1ab/nsp12300N300NaaCaaT1313AY.350.00303
ORF1ab/nsp12300N300NaaCaaT1212B.1.1.100.013378
ORF1ab/nsp12300N300NaaCaaT1111AY.390.000272
ORF1ab/nsp12300N300NaaCaaT1010AY.250.00006
ORF1ab/nsp12300N300NaaCaaT88AY.1170.000676
ORF1ab/nsp12300N300NaaCaaT66B.1.1.2220.001224
ORF1ab/nsp12300N300NaaCaaT66D.20.00045
ORF1ab/nsp12300N300NaaCaaT55AY.16.10.00235
ORF1ab/nsp12300N300NaaCaaT44AY.430.000018
ORF1ab/nsp12300N300NaaCaaT44AY.440.000024
ORF1ab/nsp12300N300NaaCaaT44AY.9.10.000335
ORF1ab/nsp12300N300NaaCaaT33AY.1200.000112
ORF1ab/nsp12300N300NaaCaaT33B.1.1.390.001529
ORF1ab/nsp12300N300NaaCaaT33B.1.1.5210.016043
ORF1ab/nsp12300N300NaaCaaT33B.1.1080.017442
ORF1ab/nsp12300N300NaaCaaT33B.1.5240.004219
ORF1ab/nsp12300N300NaaCaaT22AY.1070.000932
ORF1ab/nsp12300N300NaaCaaT22AY.200.000078
ORF1ab/nsp12300N300NaaCaaT22AY.480.00093
ORF1ab/nsp12300N300NaaCaaT22AY.99.20.000184
ORF1ab/nsp12300N300NaaCaaT22B.1.1.250.001137
ORF1ab/nsp12300N300NaaCaaT22B.1.1.2630.003115
ORF1ab/nsp12300N300NaaCaaT22B.1.1.2910.001485
ORF1ab/nsp12300N300NaaCaaT22B.1.1.510.003436
ORF1ab/nsp12300N300NaaCaaT22B.1.1.5190.000079
ORF1ab/nsp12300N300NaaCaaT22B.1.1.830.00542
ORF1ab/nsp12300N300NaaCaaT22B.1.2580.000133
ORF1ab/nsp12300N300NaaCaaT22B.1.3490.00143
ORF1ab/nsp12300N300NaaCaaT22B.1.5680.002222
ORF1ab/nsp12300N300NaaCaaT22P.10.000032
ORF1ab/nsp12300N300NaaCaaT22Q.70.002222
ORF1ab/nsp12300N300NaaCaaT11AY.1210.000135
ORF1ab/nsp12300N300NaaCaaT11AY.290.000016
ORF1ab/nsp12300N300NaaCaaT11AY.3.10.000085
ORF1ab/nsp12300N300NaaCaaT11AY.330.000067
ORF1ab/nsp12300N300NaaCaaT11AY.4.20.000022
ORF1ab/nsp12300N300NaaCaaT11AY.4.50.000107
ORF1ab/nsp12300N300NaaCaaT11AY.460.000104
ORF1ab/nsp12300N300NaaCaaT11AY.50.000021
ORF1ab/nsp12300N300NaaCaaT11AY.750.000056
ORF1ab/nsp12300N300NaaCaaT11AY.960.002075
ORF1ab/nsp12300N300NaaCaaT11B.1.1.10.000327
ORF1ab/nsp12300N300NaaCaaT11B.1.1.1960.005714
ORF1ab/nsp12300N300NaaCaaT11B.1.1.1980.001468
ORF1ab/nsp12300N300NaaCaaT11B.1.1.2140.000055
ORF1ab/nsp12300N300NaaCaaT11B.1.1.2360.006897
ORF1ab/nsp12300N300NaaCaaT11B.1.1.2580.003257
ORF1ab/nsp12300N300NaaCaaT11B.1.1.3050.003861
ORF1ab/nsp12300N300NaaCaaT11B.1.1.330.000421
ORF1ab/nsp12300N300NaaCaaT11B.1.1.4640.001473
ORF1ab/nsp12300N300NaaCaaT11B.1.1.5220.017241
ORF1ab/nsp12300N300NaaCaaT11B.1.1.5280.004808
ORF1ab/nsp12300N300NaaCaaT11B.1.1.560.017857
ORF1ab/nsp12300N300NaaCaaT11B.1.1.80.003584
ORF1ab/nsp12300N300NaaCaaT11B.1.1600.000031
ORF1ab/nsp12300N300NaaCaaT11B.1.1610.017241
ORF1ab/nsp12300N300NaaCaaT11B.1.177.230.003236
ORF1ab/nsp12300N300NaaCaaT11B.1.177.840.006667
ORF1ab/nsp12300N300NaaCaaT11B.1.214.20.0006
ORF1ab/nsp12300N300NaaCaaT11B.1.2340.000132
ORF1ab/nsp12300N300NaaCaaT11B.1.2650.001271
ORF1ab/nsp12300N300NaaCaaT11B.1.36.190.009259
ORF1ab/nsp12300N300NaaCaaT11B.1.3750.00082
ORF1ab/nsp12300N300NaaCaaT11B.1.4270.00005
ORF1ab/nsp12300N300NaaCaaT11B.1.4290.000024
ORF1ab/nsp12300N300NaaCaaT11B.1.4360.001029
ORF1ab/nsp12300N300NaaCaaT11B.1.4680.005714
ORF1ab/nsp12300N300NaaCaaT11B.1.5170.000427
ORF1ab/nsp12300N300NaaCaaT11B.1.5330.009615
ORF1ab/nsp12300N300NaaCaaT11B.1.5640.000426
ORF1ab/nsp12300N300NaaCaaT11B.1.5960.000087
ORF1ab/nsp12300N300NaaCaaT11B.1.6040.017241
ORF1ab/nsp12300N300NaaCaaT11B.1.617.10.000129
ORF1ab/nsp12300N300NaaCaaT11B.230.002924
ORF1ab/nsp12300N300NaaCaaT11P.1.140.000048