CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 300 & Codon = aGc

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12300N300SN4692SnonsynaAcaGc166166114338-14340

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12300N300SaAcaGc166166All0.000032
ORF1ab/nsp12300N300SaAcaGc6666B.1.1.70.000059
ORF1ab/nsp12300N300SaAcaGc3434AY.1030.000211
ORF1ab/nsp12300N300SaAcaGc2222AY.40.000034
ORF1ab/nsp12300N300SaAcaGc1212AY.330.000801
ORF1ab/nsp12300N300SaAcaGc33AY.440.000018
ORF1ab/nsp12300N300SaAcaGc33B.1.2320.001612
ORF1ab/nsp12300N300SaAcaGc33B.1.3510.000089
ORF1ab/nsp12300N300SaAcaGc22AY.9.20.000073
ORF1ab/nsp12300N300SaAcaGc22B.1.20.000018
ORF1ab/nsp12300N300SaAcaGc22B.1.617.20.000008
ORF1ab/nsp12300N300SaAcaGc11A0.000387
ORF1ab/nsp12300N300SaAcaGc11A.2.50.000499
ORF1ab/nsp12300N300SaAcaGc11AW.10.003049
ORF1ab/nsp12300N300SaAcaGc11AY.230.00007
ORF1ab/nsp12300N300SaAcaGc11AY.30.00001
ORF1ab/nsp12300N300SaAcaGc11AY.3.10.000085
ORF1ab/nsp12300N300SaAcaGc11AY.39.10.00004
ORF1ab/nsp12300N300SaAcaGc11AY.430.000004
ORF1ab/nsp12300N300SaAcaGc11AY.46.40.000165
ORF1ab/nsp12300N300SaAcaGc11AY.850.000427
ORF1ab/nsp12300N300SaAcaGc11B.10.000009
ORF1ab/nsp12300N300SaAcaGc11B.1.1770.000013
ORF1ab/nsp12300N300SaAcaGc11B.1.177.540.000606
ORF1ab/nsp12300N300SaAcaGc11B.1.2060.000816
ORF1ab/nsp12300N300SaAcaGc11B.1.2580.000067
ORF1ab/nsp12300N300SaAcaGc11P.1.160.000374
ORF1ab/nsp12300N300SaAcaGc11Q.10.000126