CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp12 | 293 | T293I | T4685I | nonsyn | aCa | aTa | 5988 | 5987 | 0.999833 | 14317-14319 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 5987 | 5988 | All | 0.001145 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1000 | 1000 | AY.3 | 0.009946 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 846 | 846 | AY.20 | 0.03288 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 757 | 757 | B.1.1.7 | 0.000678 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 527 | 527 | AY.4 | 0.00082 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 358 | 358 | B.1.2 | 0.003152 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 303 | 303 | B.1.617.2 | 0.001141 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 218 | 218 | A.23.1 | 0.153521 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 164 | 164 | AY.25 | 0.000986 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 149 | 149 | B.1.177.4 | 0.031448 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 93 | 93 | AY.92 | 0.026716 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 82 | 82 | AY.103 | 0.000509 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 82 | 82 | AY.30 | 0.03245 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 75 | 75 | AY.43 | 0.000332 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 73 | 73 | AY.44 | 0.000444 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 68 | 68 | B.1.1 | 0.001234 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 61 | 61 | B.1 | 0.000559 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 53 | 53 | AY.74 | 0.006129 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 51 | 51 | B.1.177 | 0.000672 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 46 | 46 | B.1.351.5 | 0.027578 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 42 | 42 | B.1.1.384 | 1 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 42 | 42 | B.1.526 | 0.000987 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 39 | 39 | P.1 | 0.000614 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 36 | 36 | B.1.1.519 | 0.00143 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 33 | 33 | AY.100 | 0.001518 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 30 | 30 | B.1.369 | 0.008557 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 28 | 28 | AY.33 | 0.00187 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 22 | 22 | AY.102 | 0.000583 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 20 | 20 | AY.39 | 0.000494 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 20 | 20 | B.1.177.32 | 0.026991 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 19 | 19 | B.1.1.369 | 0.008478 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 17 | 17 | B.1.619.1 | 0.010904 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 16 | 16 | AY.3.1 | 0.001364 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 16 | 16 | Q.2 | 0.009816 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 15 | 15 | AD.2 | 0.003284 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 15 | 15 | AY.34 | 0.001454 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 14 | 14 | B.1.234 | 0.001847 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 14 | 14 | B.1.587 | 0.026565 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 13 | 13 | B.1.351 | 0.000386 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 13 | 13 | B.1.469 | 0.046931 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 12 | 12 | AY.13 | 0.001932 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 12 | 12 | B.1.596 | 0.001046 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 11 | 11 | AY.117 | 0.00093 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 11 | 11 | AY.120 | 0.000409 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 11 | 11 | AY.47 | 0.000342 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 11 | 11 | B.1.404 | 0.014323 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 9 | 9 | AY.22 | 0.018828 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 9 | 9 | B.1.258 | 0.000599 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 9 | 9 | B.1.428 | 0.009184 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 9 | 9 | B.1.525 | 0.001018 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 8 | 8 | AF.1 | 0.296296 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 8 | 8 | B.1.1.284 | 0.000859 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 8 | 8 | B.1.177.21 | 0.000612 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 8 | 8 | B.1.221 | 0.000568 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 8 | 8 | B.1.429 | 0.000188 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 8 | 8 | B.1.438.1 | 0.000858 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 8 | 8 | C.37 | 0.000929 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 8 | 8 | C.38 | 0.064516 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 8 | 8 | N.5 | 0.014134 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 8 | 8 | P.1.14 | 0.000382 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 7 | 7 | AY.119 | 0.000247 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 7 | 7 | AY.46.1 | 0.007187 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 7 | 7 | AY.79 | 0.008475 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 7 | 7 | B.1.1.33 | 0.002946 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 7 | 7 | B.1.258.17 | 0.000728 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 6 | 6 | AY.46 | 0.000624 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 6 | 6 | AY.5 | 0.000124 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 6 | 6 | AY.51 | 0.005455 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 5 | 5 | AY.106 | 0.001674 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 5 | 5 | AY.4.2 | 0.000108 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 5 | 5 | AY.69 | 0.000933 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 5 | 5 | B.1.1.157 | 0.004566 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 5 | 5 | B.1.1.174 | 0.016892 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 5 | 5 | B.1.1.263 | 0.007788 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 5 | 5 | B.1.637 | 0.000365 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 4 | 4 | AY.121 | 0.000541 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 4 | 4 | AY.29 | 0.000063 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 4 | 4 | AY.45 | 0.000487 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 4 | 4 | AY.88 | 0.003537 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 4 | 4 | AY.9 | 0.00027 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 4 | 4 | B.1.1.222 | 0.000816 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 4 | 4 | B.1.160 | 0.000125 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 4 | 4 | B.1.177.30 | 0.01005 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 4 | 4 | B.1.177.86 | 0.000734 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 4 | 4 | B.1.427 | 0.000202 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 4 | 4 | B.1.561 | 0.001588 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 4 | 4 | D.2 | 0.0003 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 3 | 3 | AY.118 | 0.000188 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 3 | 3 | AY.26 | 0.000085 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 3 | 3 | AY.42 | 0.000121 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 3 | 3 | AY.75 | 0.000168 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 3 | 3 | AY.94 | 0.001328 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 3 | 3 | AY.98.1 | 0.000145 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 3 | 3 | B.1.1.216 | 0.002671 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 3 | 3 | B.1.1.220 | 0.005576 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 3 | 3 | B.1.1.291 | 0.002227 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 3 | 3 | B.1.160.9 | 0.021583 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 3 | 3 | B.1.177.10 | 0.002634 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 3 | 3 | B.1.214.2 | 0.001799 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 3 | 3 | B.1.243 | 0.000209 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 3 | 3 | B.1.258.11 | 0.001189 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 3 | 3 | B.1.36.29 | 0.001552 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 3 | 3 | Q.8 | 0.000495 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 2 | 0.055556 | |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | A.1 | 0.000564 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | AY.1 | 0.000791 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | AY.24 | 0.000862 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | AY.27 | 0.000129 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | AY.37 | 0.000632 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | AY.4.5 | 0.000215 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | AY.5.3 | 0.000675 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | AY.54 | 0.000191 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | AY.61 | 0.00021 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | AY.71 | 0.00095 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | B | 0.000256 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | B.1.1.214 | 0.000111 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | B.1.1.28 | 0.000622 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | B.1.1.305 | 0.007722 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | B.1.1.306 | 0.000877 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | B.1.1.39 | 0.001019 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | B.1.1.409 | 0.005666 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | B.1.1.448 | 0.004065 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | B.1.1.486 | 0.003155 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | B.1.1.70 | 0.000682 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | B.1.177.17 | 0.001642 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | B.1.177.81 | 0.000379 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | B.1.22 | 0.002635 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | B.1.36.36 | 0.001204 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | B.1.621 | 0.000177 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | N.10 | 0.058824 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 2 | 2 | Q.3 | 0.00029 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | A | 0.000387 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | A.2.5 | 0.000499 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | A.23 | 0.010526 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AA.8 | 0.022222 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.108 | 0.001103 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.110 | 0.000113 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.111 | 0.000183 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.116 | 0.000287 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.120.2 | 0.001285 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.14 | 0.000088 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.16 | 0.00038 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.16.1 | 0.00047 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.21 | 0.001898 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.23 | 0.00007 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.4.4 | 0.000409 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.46.2 | 0.000635 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.46.4 | 0.000165 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.46.5 | 0.000198 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.46.6 | 0.000072 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.57 | 0.000656 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.64 | 0.000595 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.67 | 0.000464 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.68 | 0.000274 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.7 | 0.000196 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.73 | 0.000665 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.75.1 | 0.00018 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.84 | 0.000437 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.85 | 0.000427 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.9.1 | 0.000084 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.96 | 0.002075 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | AY.98 | 0.000079 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.1.121 | 0.002427 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.1.161 | 0.003534 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.1.198 | 0.001468 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.1.227 | 0.004348 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.1.265 | 0.003155 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.1.316 | 0.000925 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.1.317 | 0.000412 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.1.318 | 0.000302 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.1.37 | 0.000193 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.1.432 | 0.001266 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.170 | 0.00431 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.177.20 | 0.001517 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.177.23 | 0.003236 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.177.51 | 0.004566 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.177.55 | 0.002331 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.177.56 | 0.000668 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.177.75 | 0.001041 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.177.8 | 0.000752 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.177.82 | 0.000477 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.177.83 | 0.001481 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.206 | 0.000816 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.239 | 0.001221 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.258.4 | 0.003448 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.298 | 0.002114 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.311 | 0.000275 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.346 | 0.001311 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.36.16 | 0.001425 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.36.17 | 0.000494 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.36.31 | 0.001751 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.36.38 | 0.001642 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.361 | 0.001289 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.409 | 0.000781 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.413 | 0.004255 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.466.1 | 0.007194 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.468 | 0.005714 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.497 | 0.000315 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.540 | 0.009709 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.564 | 0.000426 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.568 | 0.001111 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.595.1 | 0.005848 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.617.1 | 0.000129 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.618 | 0.004032 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.628 | 0.000352 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.76 | 0.011364 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.8 | 0.001972 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.1.91 | 0.002075 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.29 | 0.003509 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | C.1 | 0.002392 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | C.35 | 0.000774 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | P.1.15 | 0.000232 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | P.1.2 | 0.001156 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | P.2 | 0.000187 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | Q.1 | 0.000126 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | R.1 | 0.00009 |
ORF1ab/nsp12 | 293 | T293I | aCa | aTa | 1 | 1 | Y.1 | 0.012821 |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
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