CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 293 & Codon = Gca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12293T293AT4685AnonsynAcaGca1461450.99315114317-14319

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12293T293AAcaGca145146All0.000028
ORF1ab/nsp12293T293AAcaGca8182B.1.617.20.000305
ORF1ab/nsp12293T293AAcaGca1010AY.590.005297
ORF1ab/nsp12293T293AAcaGca99AY.250.000054
ORF1ab/nsp12293T293AAcaGca88B.1.1.70.000007
ORF1ab/nsp12293T293AAcaGca55B.1.20.000044
ORF1ab/nsp12293T293AAcaGca44AY.40.000006
ORF1ab/nsp12293T293AAcaGca33AY.390.000074
ORF1ab/nsp12293T293AAcaGca33B.1.6210.000266
ORF1ab/nsp12293T293AAcaGca22B.1.1.2300.018349
ORF1ab/nsp12293T293AAcaGca22B.1.1770.000026
ORF1ab/nsp12293T293AAcaGca22P.10.000032
ORF1ab/nsp12293T293AAcaGca11AY.1030.000006
ORF1ab/nsp12293T293AAcaGca11AY.1170.000085
ORF1ab/nsp12293T293AAcaGca11AY.16.10.00047
ORF1ab/nsp12293T293AAcaGca11AY.39.10.00004
ORF1ab/nsp12293T293AAcaGca11AY.400.000964
ORF1ab/nsp12293T293AAcaGca11AY.440.000006
ORF1ab/nsp12293T293AAcaGca11AY.550.000917
ORF1ab/nsp12293T293AAcaGca11AY.650.000533
ORF1ab/nsp12293T293AAcaGca11AY.680.000274
ORF1ab/nsp12293T293AAcaGca11AY.750.000056
ORF1ab/nsp12293T293AAcaGca11AY.90.000068
ORF1ab/nsp12293T293AAcaGca11AY.9.20.000037
ORF1ab/nsp12293T293AAcaGca11B.1.1.1760.000439
ORF1ab/nsp12293T293AAcaGca11B.1.177.440.000519
ORF1ab/nsp12293T293AAcaGca11B.1.2430.00007
ORF1ab/nsp12293T293AAcaGca11B.1.360.000146