CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 293 & Codon = Cca

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12293T293PT4685PnonsynAcaCca42410.9761914317-14319

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12293T293PAcaCca4142All0.000008
ORF1ab/nsp12293T293PAcaCca1818B.1.1.70.000016
ORF1ab/nsp12293T293PAcaCca77AY.440.000043
ORF1ab/nsp12293T293PAcaCca120.055556
ORF1ab/nsp12293T293PAcaCca22AY.250.000012
ORF1ab/nsp12293T293PAcaCca22AY.410.000588
ORF1ab/nsp12293T293PAcaCca11AY.1020.000027
ORF1ab/nsp12293T293PAcaCca11AY.1060.000335
ORF1ab/nsp12293T293PAcaCca11AY.260.000028
ORF1ab/nsp12293T293PAcaCca11AY.290.000016
ORF1ab/nsp12293T293PAcaCca11AY.40.000002
ORF1ab/nsp12293T293PAcaCca11AY.400.000964
ORF1ab/nsp12293T293PAcaCca11B.1.2430.00007
ORF1ab/nsp12293T293PAcaCca11B.1.4290.000024
ORF1ab/nsp12293T293PAcaCca11B.1.5880.00091
ORF1ab/nsp12293T293PAcaCca11B.1.617.20.000004
ORF1ab/nsp12293T293PAcaCca11C.160.00106