CoV-GLUE | Mutations | Mutation
Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):
ORF | CodonNum | Mut | ORF1abMut | MutType | RefCodon | MutCodon | AACount | CodonCount | CodonProp | Genome Position |
ORF1ab/nsp12 | 274 | D274D | D4666D | syn | gaC | gaT | 6221 | 6221 | 1 | 14260-14262 |
ORF1ab/nsp12 | 274 | D274E | D4666E | nonsyn | gaC | gaA | 24 | 23 | 0.958333 | 14260-14262 |
ORF1ab/nsp12 | 274 | D274E | D4666E | nonsyn | gaC | gaG | 24 | 1 | 0.0416667 | 14260-14262 |
ORF1ab/nsp12 | 274 | D274Y | D4666Y | nonsyn | Gac | Tac | 19 | 19 | 1 | 14260-14262 |
ORF1ab/nsp12 | 274 | D274N | D4666N | nonsyn | Gac | Aac | 15 | 14 | 0.933333 | 14260-14262 |
ORF1ab/nsp12 | 274 | D274N | D4666N | nonsyn | GaC | AaT | 15 | 1 | 0.0666667 | 14260-14262 |
ORF1ab/nsp12 | 274 | D274del | D4666del | del | GAC | --- | 9 | 9 | 1 | 14260-14262 |
ORF1ab/nsp12 | 274 | D274V | D4666V | nonsyn | gAc | gTc | 4 | 4 | 1 | 14260-14262 |
ORF1ab/nsp12 | 274 | D274G | D4666G | nonsyn | gAc | gGc | 2 | 2 | 1 | 14260-14262 |
ORF1ab/nsp12 | 274 | D274T | D4666T | nonsyn | GAC | ACT | 2 | 1 | 0.5 | 14260-14262 |
ORF1ab/nsp12 | 274 | D274A | D4666A | nonsyn | gAc | gCc | 2 | 1 | 0.5 | 14260-14262 |
ORF1ab/nsp12 | 274 | D274A | D4666A | nonsyn | gAC | gCT | 2 | 1 | 0.5 | 14260-14262 |
ORF1ab/nsp12 | 274 | D274T | D4666T | nonsyn | GAc | ACc | 2 | 1 | 0.5 | 14260-14262 |
ORF1ab/nsp12 | 274 | D274H | D4666H | nonsyn | Gac | Cac | 1 | 1 | 1 | 14260-14262 |
Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):
ORF | CodonNum | Mut | RefCodon | MutCodon | CodonCount | AACount | Lineage | LineageCodonProp |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 6221 | 6221 | All | 0.00119 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2689 | 2689 | B.1.617.2 | 0.010125 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1233 | 1233 | R.1 | 0.110981 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 394 | 394 | B.1.1.7 | 0.000353 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 315 | 315 | B.1.1.519 | 0.012509 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 168 | 168 | B.1 | 0.001539 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 109 | 109 | B.1.619.1 | 0.069917 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 99 | 99 | B.1.351 | 0.002943 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 85 | 85 | AY.4 | 0.000132 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 84 | 84 | AY.40 | 0.081003 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 76 | 76 | AY.43 | 0.000337 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 51 | 51 | AY.103 | 0.000317 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 45 | 45 | AY.25 | 0.000271 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 43 | 43 | AY.31 | 0.796296 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 40 | 40 | B.1.240.1 | 1 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 39 | 39 | B.1.2 | 0.000343 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 29 | 29 | AY.29 | 0.000457 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 27 | 27 | AY.16.1 | 0.012688 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 25 | 25 | B.1.360 | 0.316456 |
ORF1ab/nsp12 | 274 | D274E | gaC | gaA | 23 | 24 | All | 0.000004 |
ORF1ab/nsp12 | 274 | D274E | gaC | gaG | 1 | 24 | All | 0 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 24 | 24 | B.1.1 | 0.000435 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 24 | 24 | B.1.221 | 0.001705 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 22 | 22 | AY.13 | 0.003542 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 22 | 22 | AY.44 | 0.000134 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 20 | 20 | B | 0.002556 |
ORF1ab/nsp12 | 274 | D274Y | Gac | Tac | 19 | 19 | All | 0.000004 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 18 | 18 | AY.54 | 0.001716 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 18 | 18 | AY.75 | 0.001008 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 17 | 17 | AY.68 | 0.004654 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 17 | 17 | B.1.1.337 | 0.061151 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 16 | 16 | AY.47 | 0.000498 |
ORF1ab/nsp12 | 274 | D274N | Gac | Aac | 14 | 15 | All | 0.000003 |
ORF1ab/nsp12 | 274 | D274N | GaC | AaT | 1 | 15 | All | 0 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 15 | 15 | AY.26 | 0.000425 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 15 | 15 | B.1.243 | 0.001044 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 13 | 13 | B.1.160 | 0.000405 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 11 | 11 | AY.61 | 0.001153 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 11 | 11 | P.1 | 0.000173 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 10 | 10 | AY.102 | 0.000265 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 10 | 10 | AY.65 | 0.00533 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 10 | 10 | AY.9 | 0.000676 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 10 | 10 | B.1.332 | 0.034965 |
ORF1ab/nsp12 | 274 | D274del | GAC | --- | 9 | 9 | All | 0.000002 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 9 | 9 | AY.37 | 0.002845 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 9 | 9 | AY.41 | 0.002646 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 9 | 9 | AY.75.1 | 0.001623 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 9 | 9 | AY.77 | 0.010147 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 9 | 9 | AY.9.2 | 0.000331 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 9 | 9 | B.1.36 | 0.001313 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 9 | 9 | B.1.427 | 0.000454 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 8 | 8 | AY.16 | 0.003037 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 8 | 8 | AY.24 | 0.003448 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 8 | 8 | AY.67 | 0.003714 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 8 | 8 | B.1.177.44 | 0.004152 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 8 | 8 | B.1.240 | 0.001725 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 7 | 7 | AY.119 | 0.000247 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 7 | 7 | AY.20 | 0.000272 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 7 | 7 | AY.27 | 0.000453 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 7 | 7 | AY.39 | 0.000173 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 7 | 7 | AY.6 | 0.000288 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 7 | 7 | B.1.177 | 0.000092 |
ORF1ab/nsp12 | 274 | D274E | gaC | gaA | 7 | 7 | B.1.617.2 | 0.000026 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 6 | 6 | A.27 | 0.009934 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 6 | 6 | B.1.637 | 0.000438 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 5 | 5 | AY.3 | 0.00005 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 5 | 5 | AY.45 | 0.000608 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 5 | 5 | AY.53 | 0.001438 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 5 | 5 | AY.98 | 0.000395 |
ORF1ab/nsp12 | 274 | D274Y | Gac | Tac | 5 | 5 | B.1 | 0.000046 |
ORF1ab/nsp12 | 274 | D274E | gaC | gaA | 5 | 5 | B.1.1.318 | 0.001509 |
ORF1ab/nsp12 | 274 | D274del | GAC | --- | 5 | 5 | B.1.1.7 | 0.000004 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 5 | 5 | B.1.526 | 0.000118 |
ORF1ab/nsp12 | 274 | D274V | gAc | gTc | 4 | 4 | All | 0.000001 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 4 | 4 | AY.5.3 | 0.00135 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 4 | 4 | AY.5.4 | 0.001107 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 4 | 4 | AY.59 | 0.002119 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 4 | 4 | AY.64 | 0.002381 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 4 | 4 | B.1.170 | 0.017241 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 4 | 4 | B.1.582 | 0.001963 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 4 | 4 | B.1.595 | 0.001044 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 4 | 4 | B.1.617.1 | 0.000516 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 4 | 4 | P.1.14 | 0.000191 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 4 | 4 | Q.4 | 0.001819 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 3 | 3 | AY.10 | 0.00159 |
ORF1ab/nsp12 | 274 | D274N | Gac | Aac | 3 | 3 | AY.103 | 0.000019 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 3 | 3 | AY.104 | 0.005952 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 3 | 3 | AY.121 | 0.000406 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 3 | 3 | AY.19 | 0.003421 |
ORF1ab/nsp12 | 274 | D274N | Gac | Aac | 3 | 3 | AY.4 | 0.000005 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 3 | 3 | AY.52 | 0.002443 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 3 | 3 | AY.71 | 0.001425 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 3 | 3 | AY.73 | 0.001996 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 3 | 3 | AY.85 | 0.001282 |
ORF1ab/nsp12 | 274 | D274Y | Gac | Tac | 3 | 3 | B.1.1.7 | 0.000003 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 3 | 3 | B.1.192 | 0.027778 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 3 | 3 | B.1.258 | 0.0002 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 3 | 3 | B.1.369 | 0.000856 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 3 | 3 | B.1.428 | 0.003061 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 3 | 3 | B.1.429 | 0.000071 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 3 | 3 | B.1.525 | 0.000339 |
ORF1ab/nsp12 | 274 | D274V | gAc | gTc | 3 | 3 | D.2 | 0.000225 |
ORF1ab/nsp12 | 274 | D274N | Gac | Aac | 1 | 2 | 0.055556 | |
ORF1ab/nsp12 | 274 | D274N | GaC | AaT | 1 | 2 | 0.055556 | |
ORF1ab/nsp12 | 274 | D274T | GAc | ACc | 1 | 2 | 0.055556 | |
ORF1ab/nsp12 | 274 | D274T | GAC | ACT | 1 | 2 | 0.055556 | |
ORF1ab/nsp12 | 274 | D274A | gAC | gCT | 1 | 2 | 0.055556 | |
ORF1ab/nsp12 | 274 | D274A | gAc | gCc | 1 | 2 | 0.055556 | |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | A.2.5.2 | 0.003145 |
ORF1ab/nsp12 | 274 | D274G | gAc | gGc | 2 | 2 | All | 0 |
ORF1ab/nsp12 | 274 | D274A | gAc | gCc | 1 | 2 | All | 0 |
ORF1ab/nsp12 | 274 | D274T | GAC | ACT | 1 | 2 | All | 0 |
ORF1ab/nsp12 | 274 | D274T | GAc | ACc | 1 | 2 | All | 0 |
ORF1ab/nsp12 | 274 | D274A | gAC | gCT | 1 | 2 | All | 0 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | AY.118 | 0.000125 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | AY.14 | 0.000176 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | AY.23 | 0.000139 |
ORF1ab/nsp12 | 274 | D274E | gaC | gaA | 2 | 2 | AY.3.1 | 0.000171 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | AY.33 | 0.000134 |
ORF1ab/nsp12 | 274 | D274del | GAC | --- | 2 | 2 | AY.4 | 0.000003 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | AY.4.1 | 0.001475 |
ORF1ab/nsp12 | 274 | D274Y | Gac | Tac | 2 | 2 | AY.43 | 0.000009 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | AY.49 | 0.00639 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | AY.5 | 0.000041 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | AY.51 | 0.001818 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | AY.60 | 0.001876 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | AY.70 | 0.000417 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | AY.84 | 0.000875 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | AY.86 | 0.00166 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | AY.9.1 | 0.000167 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | AY.99.2 | 0.000184 |
ORF1ab/nsp12 | 274 | D274E | gaC | gaA | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp12 | 274 | D274E | gaC | gaG | 1 | 2 | B.1 | 0.000009 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | B.1.1.222 | 0.000408 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | B.1.1.25 | 0.001137 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | B.1.1.28 | 0.000622 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | B.1.1.284 | 0.000215 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | B.1.177.33 | 0.003289 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | B.1.177.75 | 0.002081 |
ORF1ab/nsp12 | 274 | D274N | Gac | Aac | 2 | 2 | B.1.36 | 0.000292 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | B.1.375 | 0.001639 |
ORF1ab/nsp12 | 274 | D274E | gaC | gaA | 2 | 2 | B.1.397 | 0.009709 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | B.1.438.1 | 0.000215 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | B.1.466.2 | 0.000782 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | D.2 | 0.00015 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 2 | 2 | P.1.15 | 0.000465 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | 0.055556 | |
ORF1ab/nsp12 | 274 | D274Y | Gac | Tac | 1 | 1 | A | 0.000387 |
ORF1ab/nsp12 | 274 | D274H | Gac | Cac | 1 | 1 | All | 0 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | AY.105 | 0.000643 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | AY.113 | 0.000142 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | AY.114 | 0.000231 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | AY.120 | 0.000037 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | AY.29.1 | 0.000221 |
ORF1ab/nsp12 | 274 | D274N | Gac | Aac | 1 | 1 | AY.3 | 0.00001 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | AY.34 | 0.000097 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | AY.38 | 0.000499 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | AY.4.3 | 0.000842 |
ORF1ab/nsp12 | 274 | D274E | gaC | gaA | 1 | 1 | AY.43 | 0.000004 |
ORF1ab/nsp12 | 274 | D274Y | Gac | Tac | 1 | 1 | AY.46 | 0.000104 |
ORF1ab/nsp12 | 274 | D274Y | Gac | Tac | 1 | 1 | AY.52 | 0.000814 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | AY.55 | 0.000917 |
ORF1ab/nsp12 | 274 | D274Y | Gac | Tac | 1 | 1 | AY.6 | 0.000041 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | AY.62 | 0.000436 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | AY.63 | 0.000387 |
ORF1ab/nsp12 | 274 | D274E | gaC | gaA | 1 | 1 | AY.7.1 | 0.000113 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | AY.87 | 0.000833 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | AY.88 | 0.000884 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | AY.98.1 | 0.000048 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | AY.99.1 | 0.001553 |
ORF1ab/nsp12 | 274 | D274Y | Gac | Tac | 1 | 1 | B | 0.000128 |
ORF1ab/nsp12 | 274 | D274del | GAC | --- | 1 | 1 | B.1.1 | 0.000018 |
ORF1ab/nsp12 | 274 | D274del | GAC | --- | 1 | 1 | B.1.1.1 | 0.000327 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.1.157 | 0.000913 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.1.220 | 0.001859 |
ORF1ab/nsp12 | 274 | D274E | gaC | gaA | 1 | 1 | B.1.1.222 | 0.000204 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.1.265 | 0.003155 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.1.311 | 0.000358 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.1.33 | 0.000421 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.1.344 | 0.010753 |
ORF1ab/nsp12 | 274 | D274Y | Gac | Tac | 1 | 1 | B.1.1.372 | 0.000689 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.1.391 | 0.008547 |
ORF1ab/nsp12 | 274 | D274E | gaC | gaA | 1 | 1 | B.1.1.519 | 0.00004 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.1.525 | 0.005464 |
ORF1ab/nsp12 | 274 | D274G | gAc | gGc | 1 | 1 | B.1.1.7 | 0.000001 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.13 | 0.002375 |
ORF1ab/nsp12 | 274 | D274E | gaC | gaA | 1 | 1 | B.1.147 | 0.000756 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.177.4 | 0.000211 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.177.57 | 0.000281 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.177.60 | 0.000218 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.177.62 | 0.001192 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.177.86 | 0.000183 |
ORF1ab/nsp12 | 274 | D274V | gAc | gTc | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp12 | 274 | D274N | Gac | Aac | 1 | 1 | B.1.2 | 0.000009 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.214 | 0.003663 |
ORF1ab/nsp12 | 274 | D274H | Gac | Cac | 1 | 1 | B.1.243 | 0.00007 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.258.12 | 0.007874 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.258.7 | 0.001912 |
ORF1ab/nsp12 | 274 | D274Y | Gac | Tac | 1 | 1 | B.1.301 | 0.005917 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.306 | 0.005714 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.349 | 0.000715 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.36.29 | 0.000517 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.36.38 | 0.001642 |
ORF1ab/nsp12 | 274 | D274Y | Gac | Tac | 1 | 1 | B.1.369 | 0.000285 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.395 | 0.007042 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.402 | 0.009804 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.416.1 | 0.001563 |
ORF1ab/nsp12 | 274 | D274Y | Gac | Tac | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.459 | 0.004082 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.558 | 0.004566 |
ORF1ab/nsp12 | 274 | D274N | Gac | Aac | 1 | 1 | B.1.580 | 0.004065 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp12 | 274 | D274N | Gac | Aac | 1 | 1 | B.1.596 | 0.000087 |
ORF1ab/nsp12 | 274 | D274G | gAc | gGc | 1 | 1 | B.1.602 | 0.006536 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp12 | 274 | D274E | gaC | gaA | 1 | 1 | B.1.609 | 0.000479 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.1.619 | 0.000871 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | B.6 | 0.00091 |
ORF1ab/nsp12 | 274 | D274N | Gac | Aac | 1 | 1 | C.37.1 | 0.002618 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | N.5 | 0.001767 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | P.1.12 | 0.000484 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | P.1.17 | 0.000162 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | Q.8 | 0.000165 |
ORF1ab/nsp12 | 274 | D274D | gaC | gaT | 1 | 1 | Z.1 | 0.00289 |
![]() |
![]() |
CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk
|