CoV-GLUEGenomeCountriesLineagesMutationsInsertionsDeletionsUpdated:

CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 264

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12264P264SP4656SnonsynCctTct190719050.99895114230-14232
ORF1ab/nsp12264P264SP4656SnonsynCcTTcC190710.00052438414230-14232
ORF1ab/nsp12264P264SP4656SnonsynCcTTcA190710.00052438414230-14232
ORF1ab/nsp12264P264TP4656TnonsynCctAct12461246114230-14232
ORF1ab/nsp12264P264PP4656PsynccTccC4274110.96252914230-14232
ORF1ab/nsp12264P264PP4656PsynccTccA427120.02810314230-14232
ORF1ab/nsp12264P264PP4656PsynccTccG42740.0093676814230-14232
ORF1ab/nsp12264P264AP4656AnonsynCctGct77750.97402614230-14232
ORF1ab/nsp12264P264AP4656AnonsynCcTGcC7720.02597414230-14232
ORF1ab/nsp12264P264HP4656HnonsyncCtcAt6565114230-14232
ORF1ab/nsp12264P264LP4656LnonsyncCtcTt32280.87514230-14232
ORF1ab/nsp12264P264LP4656LnonsyncCTcTA3220.062514230-14232
ORF1ab/nsp12264P264LP4656LnonsyncCTcTC3210.0312514230-14232
ORF1ab/nsp12264P264LP4656LnonsynCCTTTA3210.0312514230-14232
ORF1ab/nsp12264P264delP4656deldelCCT---1818114230-14232
ORF1ab/nsp12264P264RP4656RnonsyncCtcGt1111114230-14232
ORF1ab/nsp12264P264del1P4656del1delccTcc-530.614230-14232
ORF1ab/nsp12264P264del1P4656del1delCct-ct520.414230-14232
ORF1ab/nsp12264P264del2P4656del2delCCt--t430.7514230-14232
ORF1ab/nsp12264P264del2P4656del2delcCTc--410.2514230-14232
ORF1ab/nsp12264P264FP4656FnonsynCCTTTC210.514230-14232
ORF1ab/nsp12264P264FP4656FnonsynCCtTTt210.514230-14232

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12264P264SCctTct19051907All0.000364
ORF1ab/nsp12264P264SCcTTcC11907All0
ORF1ab/nsp12264P264SCcTTcA11907All0
ORF1ab/nsp12264P264TCctAct12461246All0.000238
ORF1ab/nsp12264P264TCctAct11171117B.1.3670.885103
ORF1ab/nsp12264P264SCctTct716716B.1.1.3770.98895
ORF1ab/nsp12264P264PccTccC411427All0.000079
ORF1ab/nsp12264P264PccTccA12427All0.000002
ORF1ab/nsp12264P264PccTccG4427All0.000001
ORF1ab/nsp12264P264SCctTct219219B.1.1.70.000196
ORF1ab/nsp12264P264PccTccC168172B.1.1.70.00015
ORF1ab/nsp12264P264PccTccG2172B.1.1.70.000002
ORF1ab/nsp12264P264PccTccA2172B.1.1.70.000002
ORF1ab/nsp12264P264SCctTct134134AY.1130.01908
ORF1ab/nsp12264P264PccTccC122122AY.140.010738
ORF1ab/nsp12264P264SCctTct8282AY.390.002026
ORF1ab/nsp12264P264SCctTct8181B.1.617.20.000305
ORF1ab/nsp12264P264ACctGct7577All0.000014
ORF1ab/nsp12264P264ACcTGcC277All0
ORF1ab/nsp12264P264TCctAct7474B.10.000678
ORF1ab/nsp12264P264SCctTct6666AY.40.000103
ORF1ab/nsp12264P264HcCtcAt6565All0.000012
ORF1ab/nsp12264P264ACctGct6464AY.40.0001
ORF1ab/nsp12264P264SCctTct4343AY.1030.000267
ORF1ab/nsp12264P264SCctTct3939B.1.20.000343
ORF1ab/nsp12264P264SCctTct3434B.1.2430.002366
ORF1ab/nsp12264P264LcCtcTt2832All0.000005
ORF1ab/nsp12264P264LcCTcTA232All0
ORF1ab/nsp12264P264LcCTcTC132All0
ORF1ab/nsp12264P264LCCTTTA132All0
ORF1ab/nsp12264P264SCctTct3131B.1.4800.077114
ORF1ab/nsp12264P264SCctTct3030B.10.000275
ORF1ab/nsp12264P264SCctTct2929AY.300.011476
ORF1ab/nsp12264P264SCctTct2828B.1.1.560.5
ORF1ab/nsp12264P264SCctTct2626AY.440.000158
ORF1ab/nsp12264P264HcCtcAt2121B.1.1.70.000019
ORF1ab/nsp12264P264delCCT---1818All0.000003
ORF1ab/nsp12264P264SCctTct1818B.1.5960.001568
ORF1ab/nsp12264P264PccTccC1717AY.340.001648
ORF1ab/nsp12264P264SCctTct1717P.10.000268
ORF1ab/nsp12264P264SCctTct1616B.1.1770.000211
ORF1ab/nsp12264P264SCctTct1515AY.1020.000398
ORF1ab/nsp12264P264SCctTct1212AY.250.000072
ORF1ab/nsp12264P264SCctTct1212AY.3.10.001023
ORF1ab/nsp12264P264PccTccC1212B.1.20.000106
ORF1ab/nsp12264P264RcCtcGt1111All0.000002
ORF1ab/nsp12264P264SCctTct1111AY.430.000049
ORF1ab/nsp12264P264PccTccC1010AY.4.20.000217
ORF1ab/nsp12264P264SCctTct1010AY.610.001048
ORF1ab/nsp12264P264SCctTct1010B.1.177.760.024938
ORF1ab/nsp12264P264PccTccC99AY.360.001334
ORF1ab/nsp12264P264PccTccC99B.1.2400.00194
ORF1ab/nsp12264P264SCctTct99B.1.5970.041667
ORF1ab/nsp12264P264HcCtcAt88AY.30.00008
ORF1ab/nsp12264P264TCctAct88AY.4.50.00086
ORF1ab/nsp12264P264RcCtcGt88AY.530.0023
ORF1ab/nsp12264P264SCctTct88B.1.177.40.001688
ORF1ab/nsp12264P264SCctTct88B.520.080808
ORF1ab/nsp12264P264PccTccC77AY.1030.000043
ORF1ab/nsp12264P264PccTccC77AY.46.60.000505
ORF1ab/nsp12264P264SCctTct77B.1.1490.023973
ORF1ab/nsp12264P264TCctAct66AY.1000.000276
ORF1ab/nsp12264P264HcCtcAt66AY.40.000009
ORF1ab/nsp12264P264SCctTct66B0.000767
ORF1ab/nsp12264P264SCctTct66B.1.4290.000141
ORF1ab/nsp12264P264TCctAct66B.1.5960.000523
ORF1ab/nsp12264P264del1ccTcc-35All0.000001
ORF1ab/nsp12264P264del1Cct-ct25All0
ORF1ab/nsp12264P264SCctTct55AY.1100.000563
ORF1ab/nsp12264P264SCctTct55AY.1190.000177
ORF1ab/nsp12264P264SCctTct55AY.30.00005
ORF1ab/nsp12264P264SCctTct55AY.460.00052
ORF1ab/nsp12264P264ACctGct55AY.50.000103
ORF1ab/nsp12264P264SCctTct55AY.740.000578
ORF1ab/nsp12264P264LcCtcTt55B.1.1.70.000004
ORF1ab/nsp12264P264SCctTct55B.1.360.00073
ORF1ab/nsp12264P264HcCtcAt55B.1.617.20.000019
ORF1ab/nsp12264P264SCctTct55C.370.00058
ORF1ab/nsp12264P264LcCTcTC140.055556
ORF1ab/nsp12264P264LcCTcTA140.055556
ORF1ab/nsp12264P264LCCTTTA140.055556
ORF1ab/nsp12264P264LcCtcTt140.055556
ORF1ab/nsp12264P264del2CCt--t34All0.000001
ORF1ab/nsp12264P264del2cCTc--14All0
ORF1ab/nsp12264P264PccTccC44AY.250.000024
ORF1ab/nsp12264P264SCctTct44AY.39.10.000158
ORF1ab/nsp12264P264HcCtcAt44AY.430.000018
ORF1ab/nsp12264P264PccTccC44AY.540.000381
ORF1ab/nsp12264P264SCctTct44AY.980.000316
ORF1ab/nsp12264P264TCctAct44B0.000511
ORF1ab/nsp12264P264delCCT---44B.1.1.70.000004
ORF1ab/nsp12264P264SCctTct44B.1.177.70.000659
ORF1ab/nsp12264P264SCctTct44B.1.4980.081633
ORF1ab/nsp12264P264LcCtcTt44D.20.0003
ORF1ab/nsp12264P264SCctTct44P.1.150.000929
ORF1ab/nsp12264P264SCctTct44Q.10.000505
ORF1ab/nsp12264P264SCctTct44Q.30.00058
ORF1ab/nsp12264P264PccTccC230.111111
ORF1ab/nsp12264P264ACctGct230.111111
ORF1ab/nsp12264P264PccTccA130.055556
ORF1ab/nsp12264P264SCctTct130.055556
ORF1ab/nsp12264P264SCcTTcC130.055556
ORF1ab/nsp12264P264ACcTGcC130.055556
ORF1ab/nsp12264P264SCcTTcA130.055556
ORF1ab/nsp12264P264SCctTct33A0.001161
ORF1ab/nsp12264P264SCctTct33AY.230.000209
ORF1ab/nsp12264P264TCctAct33AY.250.000018
ORF1ab/nsp12264P264SCctTct33AY.290.000047
ORF1ab/nsp12264P264PccTccC23AY.300.000791
ORF1ab/nsp12264P264PccTccA13AY.300.000396
ORF1ab/nsp12264P264PccTccC33AY.40.000005
ORF1ab/nsp12264P264SCctTct33AY.46.40.000494
ORF1ab/nsp12264P264PccTccC33AY.590.001589
ORF1ab/nsp12264P264HcCtcAt33B.10.000027
ORF1ab/nsp12264P264SCctTct33B.1.10.000054
ORF1ab/nsp12264P264SCctTct33B.1.177.540.001819
ORF1ab/nsp12264P264LcCtcTt33B.1.20.000026
ORF1ab/nsp12264P264TCctAct33B.1.2580.0002
ORF1ab/nsp12264P264RcCtcGt33B.1.617.20.000011
ORF1ab/nsp12264P264PccTccC33B.1.617.20.000011
ORF1ab/nsp12264P264SCctTct33D.20.000225
ORF1ab/nsp12264P264SCctTct33P.1.140.000143
ORF1ab/nsp12264P264FCCtTTt120.055556
ORF1ab/nsp12264P264FCCTTTC120.055556
ORF1ab/nsp12264P264FCCTTTC12All0
ORF1ab/nsp12264P264FCCtTTt12All0
ORF1ab/nsp12264P264SCctTct22AY.1000.000092
ORF1ab/nsp12264P264HcCtcAt22AY.1020.000053
ORF1ab/nsp12264P264LcCtcTt22AY.1030.000012
ORF1ab/nsp12264P264TCctAct22AY.1050.001286
ORF1ab/nsp12264P264SCctTct22AY.1170.000169
ORF1ab/nsp12264P264SCctTct22AY.1200.000074
ORF1ab/nsp12264P264PccTccC22AY.160.000759
ORF1ab/nsp12264P264SCctTct22AY.200.000078
ORF1ab/nsp12264P264PccTccC22AY.380.000999
ORF1ab/nsp12264P264PccTccC22AY.39.20.003082
ORF1ab/nsp12264P264HcCtcAt22AY.420.00008
ORF1ab/nsp12264P264SCctTct22AY.420.00008
ORF1ab/nsp12264P264PccTccC22AY.430.000009
ORF1ab/nsp12264P264SCctTct22AY.450.000243
ORF1ab/nsp12264P264SCctTct22AY.620.000871
ORF1ab/nsp12264P264PccTccA22AY.850.000854
ORF1ab/nsp12264P264SCctTct22AY.9.20.000073
ORF1ab/nsp12264P264PccTccC22B.1.1.250.001137
ORF1ab/nsp12264P264PccTccC22B.1.1.370.000386
ORF1ab/nsp12264P264SCctTct22B.1.1.4340.000697
ORF1ab/nsp12264P264SCctTct22B.1.1.4860.003155
ORF1ab/nsp12264P264TCctAct22B.1.1.560.035714
ORF1ab/nsp12264P264del2CCt--t22B.1.1.70.000002
ORF1ab/nsp12264P264TCctAct22B.1.1600.000062
ORF1ab/nsp12264P264TCctAct22B.1.1770.000026
ORF1ab/nsp12264P264LcCTcTA12B.1.1770.000013
ORF1ab/nsp12264P264LcCtcTt12B.1.1770.000013
ORF1ab/nsp12264P264PccTccC12B.1.1770.000013
ORF1ab/nsp12264P264PccTccA12B.1.1770.000013
ORF1ab/nsp12264P264SCctTct22B.1.177.730.001133
ORF1ab/nsp12264P264SCctTct22B.1.177.860.000367
ORF1ab/nsp12264P264SCctTct22B.1.2340.000264
ORF1ab/nsp12264P264SCctTct22B.1.3970.009709
ORF1ab/nsp12264P264SCctTct22B.1.4270.000101
ORF1ab/nsp12264P264PccTccC22B.1.5260.000047
ORF1ab/nsp12264P264SCctTct22B.1.5260.000047
ORF1ab/nsp12264P264LcCtcTt22B.1.5960.000174
ORF1ab/nsp12264P264TCctAct22B.1.617.20.000008
ORF1ab/nsp12264P264ACcTGcC12B.1.617.20.000004
ORF1ab/nsp12264P264ACctGct12B.1.617.20.000004
ORF1ab/nsp12264P264SCctTct22B.1.6300.010471
ORF1ab/nsp12264P264PccTccC22C.370.000232
ORF1ab/nsp12264P264TCctAct22P.10.000032
ORF1ab/nsp12264P264HcCtcAt11A0.000387
ORF1ab/nsp12264P264SCctTct11AY.100.00053
ORF1ab/nsp12264P264ACctGct11AY.1000.000046
ORF1ab/nsp12264P264TCctAct11AY.1030.000006
ORF1ab/nsp12264P264del1ccTcc-11AY.1030.000006
ORF1ab/nsp12264P264TCctAct11AY.1040.001984
ORF1ab/nsp12264P264HcCtcAt11AY.1090.00074
ORF1ab/nsp12264P264PccTccA11AY.1170.000085
ORF1ab/nsp12264P264SCctTct11AY.1180.000063
ORF1ab/nsp12264P264TCctAct11AY.1190.000035
ORF1ab/nsp12264P264delCCT---11AY.1200.000037
ORF1ab/nsp12264P264SCctTct11AY.140.000088
ORF1ab/nsp12264P264LcCtcTt11AY.140.000088
ORF1ab/nsp12264P264SCctTct11AY.16.10.00047
ORF1ab/nsp12264P264PccTccC11AY.190.00114
ORF1ab/nsp12264P264delCCT---11AY.250.000006
ORF1ab/nsp12264P264SCctTct11AY.260.000028
ORF1ab/nsp12264P264PccTccC11AY.290.000016
ORF1ab/nsp12264P264HcCtcAt11AY.330.000067
ORF1ab/nsp12264P264SCctTct11AY.340.000097
ORF1ab/nsp12264P264PccTccC11AY.390.000025
ORF1ab/nsp12264P264LcCtcTt11AY.40.000002
ORF1ab/nsp12264P264SCctTct11AY.4.2.10.000149
ORF1ab/nsp12264P264SCctTct11AY.4.50.000107
ORF1ab/nsp12264P264delCCT---11AY.430.000004
ORF1ab/nsp12264P264LcCtcTt11AY.430.000004
ORF1ab/nsp12264P264ACctGct11AY.440.000006
ORF1ab/nsp12264P264SCctTct11AY.46.50.000198
ORF1ab/nsp12264P264SCctTct11AY.50.000021
ORF1ab/nsp12264P264HcCtcAt11AY.520.000814
ORF1ab/nsp12264P264SCctTct11AY.540.000095
ORF1ab/nsp12264P264SCctTct11AY.580.000907
ORF1ab/nsp12264P264SCctTct11AY.60.000041
ORF1ab/nsp12264P264delCCT---11AY.650.000533
ORF1ab/nsp12264P264delCCT---11AY.660.00107
ORF1ab/nsp12264P264SCctTct11AY.7.10.000113
ORF1ab/nsp12264P264LcCtcTt11AY.7.10.000113
ORF1ab/nsp12264P264SCctTct11AY.710.000475
ORF1ab/nsp12264P264SCctTct11AY.750.000056
ORF1ab/nsp12264P264SCctTct11AY.75.10.00018
ORF1ab/nsp12264P264delCCT---11AY.80.000606
ORF1ab/nsp12264P264SCctTct11AY.840.000437
ORF1ab/nsp12264P264SCctTct11AY.850.000427
ORF1ab/nsp12264P264HcCtcAt11AY.880.000884
ORF1ab/nsp12264P264PccTccC11AY.90.000068
ORF1ab/nsp12264P264HcCtcAt11AY.9.10.000084
ORF1ab/nsp12264P264SCctTct11AY.920.000287
ORF1ab/nsp12264P264TCctAct11AY.980.000079
ORF1ab/nsp12264P264LcCtcTt11AY.98.10.000048
ORF1ab/nsp12264P264LcCtcTt11B0.000128
ORF1ab/nsp12264P264HcCtcAt11B0.000128
ORF1ab/nsp12264P264del1ccTcc-11B.10.000009
ORF1ab/nsp12264P264PccTccC11B.10.000009
ORF1ab/nsp12264P264del2cCTc--11B.10.000009
ORF1ab/nsp12264P264PccTccC11B.1.10.000018
ORF1ab/nsp12264P264TCctAct11B.1.10.000018
ORF1ab/nsp12264P264delCCT---11B.1.10.000018
ORF1ab/nsp12264P264delCCT---11B.1.1.10.000327
ORF1ab/nsp12264P264SCctTct11B.1.1.1980.001468
ORF1ab/nsp12264P264SCctTct11B.1.1.2170.003636
ORF1ab/nsp12264P264SCctTct11B.1.1.280.000311
ORF1ab/nsp12264P264SCctTct11B.1.1.2840.000107
ORF1ab/nsp12264P264SCctTct11B.1.1.30.008696
ORF1ab/nsp12264P264LcCtcTt11B.1.1.3060.000438
ORF1ab/nsp12264P264SCctTct11B.1.1.3060.000438
ORF1ab/nsp12264P264SCctTct11B.1.1.3160.000925
ORF1ab/nsp12264P264SCctTct11B.1.1.3180.000302
ORF1ab/nsp12264P264SCctTct11B.1.1.3260.001761
ORF1ab/nsp12264P264SCctTct11B.1.1.330.000421
ORF1ab/nsp12264P264HcCtcAt11B.1.1.4160.000905
ORF1ab/nsp12264P264PccTccC11B.1.1.4200.001006
ORF1ab/nsp12264P264SCctTct11B.1.1.4320.001266
ORF1ab/nsp12264P264TCctAct11B.1.1.4340.000349
ORF1ab/nsp12264P264SCctTct11B.1.1.500.000679
ORF1ab/nsp12264P264SCctTct11B.1.1.5260.003546
ORF1ab/nsp12264P264del1Cct-ct11B.1.1.560.017857
ORF1ab/nsp12264P264TCctAct11B.1.1.70.000001
ORF1ab/nsp12264P264TCctAct11B.1.1570.002985
ORF1ab/nsp12264P264PccTccA11B.1.177.320.00135
ORF1ab/nsp12264P264SCctTct11B.1.177.420.000894
ORF1ab/nsp12264P264TCctAct11B.1.177.60.000977
ORF1ab/nsp12264P264PccTccG11B.1.177.600.000218
ORF1ab/nsp12264P264SCctTct11B.1.177.710.010101
ORF1ab/nsp12264P264SCctTct11B.1.177.810.000189
ORF1ab/nsp12264P264delCCT---11B.1.177.830.001481
ORF1ab/nsp12264P264TCctAct11B.1.177.860.000183
ORF1ab/nsp12264P264SCctTct11B.1.177.870.000728
ORF1ab/nsp12264P264del1ccTcc-11B.1.20.000009
ORF1ab/nsp12264P264HcCtcAt11B.1.20.000009
ORF1ab/nsp12264P264SCctTct11B.1.2210.000071
ORF1ab/nsp12264P264TCctAct11B.1.2210.000071
ORF1ab/nsp12264P264SCctTct11B.1.2400.000216
ORF1ab/nsp12264P264SCctTct11B.1.2580.000067
ORF1ab/nsp12264P264delCCT---11B.1.2580.000067
ORF1ab/nsp12264P264HcCtcAt11B.1.3010.005917
ORF1ab/nsp12264P264SCctTct11B.1.3110.000275
ORF1ab/nsp12264P264PccTccC11B.1.3110.000275
ORF1ab/nsp12264P264SCctTct11B.1.3510.00003
ORF1ab/nsp12264P264PccTccC11B.1.3510.00003
ORF1ab/nsp12264P264SCctTct11B.1.36.170.000494
ORF1ab/nsp12264P264SCctTct11B.1.36.360.000602
ORF1ab/nsp12264P264PccTccA11B.1.36.80.001
ORF1ab/nsp12264P264SCctTct11B.1.3670.000792
ORF1ab/nsp12264P264SCctTct11B.1.3690.000285
ORF1ab/nsp12264P264SCctTct11B.1.3770.004566
ORF1ab/nsp12264P264del1Cct-ct11B.1.3990.001934
ORF1ab/nsp12264P264SCctTct11B.1.416.10.001563
ORF1ab/nsp12264P264LcCtcTt11B.1.4270.00005
ORF1ab/nsp12264P264HcCtcAt11B.1.4290.000024
ORF1ab/nsp12264P264SCctTct11B.1.4590.004082
ORF1ab/nsp12264P264LcCtcTt11B.1.4590.004082
ORF1ab/nsp12264P264SCctTct11B.1.5230.002451
ORF1ab/nsp12264P264del2CCt--t11B.1.5250.000113
ORF1ab/nsp12264P264TCctAct11B.1.5330.009615
ORF1ab/nsp12264P264HcCtcAt11B.1.5460.003704
ORF1ab/nsp12264P264SCctTct11B.1.5750.000303
ORF1ab/nsp12264P264PccTccC11B.1.5760.000907
ORF1ab/nsp12264P264SCctTct11B.1.5950.000261
ORF1ab/nsp12264P264SCctTct11B.1.6000.005848
ORF1ab/nsp12264P264delCCT---11B.1.617.20.000004
ORF1ab/nsp12264P264SCctTct11B.1.6210.000089
ORF1ab/nsp12264P264HcCtcAt11B.1.6230.000536
ORF1ab/nsp12264P264ACctGct11B.1.6370.000073
ORF1ab/nsp12264P264SCctTct11B.1.80.001972
ORF1ab/nsp12264P264TCctAct11B.1.90.006173
ORF1ab/nsp12264P264SCctTct11C.160.00106
ORF1ab/nsp12264P264delCCT---11C.170.055556
ORF1ab/nsp12264P264delCCT---11C.360.000911
ORF1ab/nsp12264P264SCctTct11C.360.000911
ORF1ab/nsp12264P264PccTccA11D.20.000075
ORF1ab/nsp12264P264PccTccC11L.30.003546
ORF1ab/nsp12264P264HcCtcAt11P.1.120.000484
ORF1ab/nsp12264P264LcCtcTt11P.1.120.000484
ORF1ab/nsp12264P264SCctTct11P.1.120.000484
ORF1ab/nsp12264P264PccTccA11P.1.20.001156
ORF1ab/nsp12264P264SCctTct11P.1.40.000977
ORF1ab/nsp12264P264PccTccG11Q.10.000126
ORF1ab/nsp12264P264SCctTct11Q.80.000165
ORF1ab/nsp12264P264delCCT---11Q.80.000165
ORF1ab/nsp12264P264PccTccC11R.10.00009

CoV-GLUE is still in development. CoV-GLUE was originally developed as part of COG-UK by Josh Singer using the GLUE framework at the MRC-University of Glasgow Centre for Virus Research (CVR). In 2021 it was redeveloped by Richard Orton to scale to the millions of genome sequences available. We acknowledge support from the MRC (MC_UU_12014/12), WT (220977/Z/20/Z) and UKRI G2P (MR/W005611/1). Please contact Richard Orton with any queries: Richard.Orton@glasgow.ac.uk

CoV-GLUE uses sequence data from GISAID. GISAID data provided via this web application is subject to GISAID's Terms and Conditions.