CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 261 & Codon = tCa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12261L261SL4653SnonsyntTatCa50460.9214221-14223

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12261L261StTatCa4650All0.000009
ORF1ab/nsp12261L261StTatCa1616B.1.1.70.000014
ORF1ab/nsp12261L261StTatCa55AY.1030.000031
ORF1ab/nsp12261L261StTatCa13B.1.1.2910.000742
ORF1ab/nsp12261L261StTatCa23B.1.3710.002245
ORF1ab/nsp12261L261StTatCa120.055556
ORF1ab/nsp12261L261StTatCa22AY.250.000012
ORF1ab/nsp12261L261StTatCa22AY.430.000009
ORF1ab/nsp12261L261StTatCa22B.10.000018
ORF1ab/nsp12261L261StTatCa11A.2.50.000499
ORF1ab/nsp12261L261StTatCa11AY.1110.000183
ORF1ab/nsp12261L261StTatCa11AY.1190.000035
ORF1ab/nsp12261L261StTatCa11AY.30.00001
ORF1ab/nsp12261L261StTatCa11AY.40.000002
ORF1ab/nsp12261L261StTatCa11AY.440.000006
ORF1ab/nsp12261L261StTatCa11B.1.1.5190.00004
ORF1ab/nsp12261L261StTatCa11B.1.1770.000013
ORF1ab/nsp12261L261StTatCa11B.1.20.000009
ORF1ab/nsp12261L261StTatCa11B.1.2400.000216
ORF1ab/nsp12261L261StTatCa11B.1.3510.00003
ORF1ab/nsp12261L261StTatCa11B.1.351.50.0006
ORF1ab/nsp12261L261StTatCa11B.1.4290.000024
ORF1ab/nsp12261L261StTatCa11B.1.466.20.000391
ORF1ab/nsp12261L261StTatCa11N.90.005952