CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 26

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1226T26IT4418InonsynaCtaTt10195101930.99980413516-13518
ORF1ab/nsp1226T26IT4418InonsynaCTaTC1019520.00019617513516-13518
ORF1ab/nsp1226T26TT4418TsynacTacC1541270.82467513516-13518
ORF1ab/nsp1226T26TT4418TsynacTacA154170.1103913516-13518
ORF1ab/nsp1226T26TT4418TsynacTacG154100.064935113516-13518
ORF1ab/nsp1226T26AT4418AnonsynActGct75740.98666713516-13518
ORF1ab/nsp1226T26AT4418AnonsynAcTGcC7510.013333313516-13518
ORF1ab/nsp1226T26delT4418deldelACT---5858113516-13518
ORF1ab/nsp1226T26NT4418NnonsynaCtaAt3939113516-13518
ORF1ab/nsp1226T26ST4418SnonsynaCtaGt1280.66666713516-13518
ORF1ab/nsp1226T26ST4418SnonsynActTct1240.33333313516-13518
ORF1ab/nsp1226T26del1T4418del1delAct-ct33113516-13518
ORF1ab/nsp1226T26PT4418PnonsynActCct33113516-13518
ORF1ab/nsp1226T26FT4418FnonsynACtTTt11113516-13518

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1226T26IaCtaTt1019310195All0.00195
ORF1ab/nsp1226T26IaCTaTC210195All0
ORF1ab/nsp1226T26IaCtaTt26732673B.1.1.70.002393
ORF1ab/nsp1226T26IaCtaTt13191319B.1.177.770.957879
ORF1ab/nsp1226T26IaCtaTt475475AY.40.000739
ORF1ab/nsp1226T26IaCtaTt469469AY.440.002855
ORF1ab/nsp1226T26IaCtaTt399399AY.290.006294
ORF1ab/nsp1226T26IaCtaTt344344B.1.2210.024435
ORF1ab/nsp1226T26IaCtaTt334334B.10.003059
ORF1ab/nsp1226T26IaCtaTt333333AY.430.001475
ORF1ab/nsp1226T26IaCtaTt264264B.1.617.20.000994
ORF1ab/nsp1226T26IaCtaTt253253B.1.617.10.032628
ORF1ab/nsp1226T26IaCtaTt216216B.1.20.001902
ORF1ab/nsp1226T26IaCtaTt206206AY.1030.001279
ORF1ab/nsp1226T26IaCtaTt199199AY.250.001197
ORF1ab/nsp1226T26IaCtaTt174174B.1.1770.002291
ORF1ab/nsp1226T26IaCtaTt161161B.1.3460.211009
ORF1ab/nsp1226T26TacTacC127154All0.000024
ORF1ab/nsp1226T26TacTacA17154All0.000003
ORF1ab/nsp1226T26TacTacG10154All0.000002
ORF1ab/nsp1226T26IaCtaTt131131B.1.1.2140.007265
ORF1ab/nsp1226T26IaCtaTt125125P.10.001969
ORF1ab/nsp1226T26IaCtaTt105105B.1.5260.002468
ORF1ab/nsp1226T26IaCtaTt9999B.1.10.001796
ORF1ab/nsp1226T26IaCtaTt9595AY.390.002348
ORF1ab/nsp1226T26IaCtaTt8787AY.850.037164
ORF1ab/nsp1226T26AActGct7475All0.000014
ORF1ab/nsp1226T26AAcTGcC175All0
ORF1ab/nsp1226T26IaCtaTt7474B.1.351.20.02239
ORF1ab/nsp1226T26IaCtaTt7070B.1.1.2220.01428
ORF1ab/nsp1226T26delACT---5858All0.000011
ORF1ab/nsp1226T26IaCtaTt5454AY.260.001529
ORF1ab/nsp1226T26IaCtaTt5151Q.10.006443
ORF1ab/nsp1226T26IaCtaTt4848AY.30.000477
ORF1ab/nsp1226T26IaCtaTt4545B.1.1600.001403
ORF1ab/nsp1226T26IaCtaTt4444B.1.3510.001308
ORF1ab/nsp1226T26NaCtaAt3939All0.000007
ORF1ab/nsp1226T26AActGct3737AY.40.000058
ORF1ab/nsp1226T26IaCtaTt3636AY.420.001448
ORF1ab/nsp1226T26IaCtaTt3333B.1.6210.002921
ORF1ab/nsp1226T26IaCtaTt3030A.2.5.20.04717
ORF1ab/nsp1226T26IaCtaTt2929R.10.00261
ORF1ab/nsp1226T26IaCtaTt2828AY.60.001152
ORF1ab/nsp1226T26IaCtaTt2727AY.610.002829
ORF1ab/nsp1226T26IaCtaTt2727B.1.1.5190.001072
ORF1ab/nsp1226T26IaCtaTt2727B.1.4290.000635
ORF1ab/nsp1226T26IaCtaTt2525AY.9.20.000918
ORF1ab/nsp1226T26IaCtaTt2424AY.50.000496
ORF1ab/nsp1226T26IaCtaTt2424B.1.2430.00167
ORF1ab/nsp1226T26IaCtaTt2323AY.200.000894
ORF1ab/nsp1226T26IaCtaTt2222AY.1020.000583
ORF1ab/nsp1226T26IaCtaTt2222B.1.2580.001464
ORF1ab/nsp1226T26IaCtaTt2121B.1.177.860.003853
ORF1ab/nsp1226T26TacTacC2020AY.1200.000744
ORF1ab/nsp1226T26TacTacC2020AY.46.60.001444
ORF1ab/nsp1226T26IaCtaTt2020B.1.177.210.001529
ORF1ab/nsp1226T26IaCtaTt1919P.1.140.000908
ORF1ab/nsp1226T26TacTacC1818C.370.002089
ORF1ab/nsp1226T26IaCtaTt1717AY.29.10.003749
ORF1ab/nsp1226T26IaCtaTt1717AY.4.20.000369
ORF1ab/nsp1226T26TacTacC1617B.1.1.70.000014
ORF1ab/nsp1226T26TacTacA117B.1.1.70.000001
ORF1ab/nsp1226T26IaCtaTt1717C.370.001973
ORF1ab/nsp1226T26TacTacA1116B.1.4290.000259
ORF1ab/nsp1226T26TacTacC516B.1.4290.000118
ORF1ab/nsp1226T26IaCtaTt1616B.1.5440.096386
ORF1ab/nsp1226T26IaCtaTt1616P.20.002986
ORF1ab/nsp1226T26IaCtaTt1515B.1.1.3220.131579
ORF1ab/nsp1226T26delACT---1515B.1.1.70.000013
ORF1ab/nsp1226T26IaCtaTt1515B.1.4990.015756
ORF1ab/nsp1226T26IaCtaTt1515B.1.6300.078534
ORF1ab/nsp1226T26IaCtaTt1414AY.1180.000877
ORF1ab/nsp1226T26IaCtaTt1414AY.5.30.004723
ORF1ab/nsp1226T26IaCtaTt1414B.1.5960.00122
ORF1ab/nsp1226T26IaCtaTt1113AY.1200.000409
ORF1ab/nsp1226T26IaCTaTC213AY.1200.000074
ORF1ab/nsp1226T26IaCtaTt1313B.1.1.250.007391
ORF1ab/nsp1226T26IaCtaTt1313B.1.177.750.013528
ORF1ab/nsp1226T26SaCtaGt812All0.000002
ORF1ab/nsp1226T26SActTct412All0.000001
ORF1ab/nsp1226T26IaCtaTt1212AY.340.001164
ORF1ab/nsp1226T26IaCtaTt1212AY.590.006356
ORF1ab/nsp1226T26IaCtaTt1212B.1.1.2160.010686
ORF1ab/nsp1226T26IaCtaTt1212B.1.1.2840.001289
ORF1ab/nsp1226T26IaCtaTt1111AY.1190.000388
ORF1ab/nsp1226T26IaCtaTt1111B.1.36.260.031429
ORF1ab/nsp1226T26IaCtaTt1111P.1.150.002556
ORF1ab/nsp1226T26IaCtaTt1010B0.001278
ORF1ab/nsp1226T26IaCtaTt1010B.1.4090.007812
ORF1ab/nsp1226T26TacTacG79AY.1030.000043
ORF1ab/nsp1226T26TacTacC29AY.1030.000012
ORF1ab/nsp1226T26IaCtaTt99AY.130.001449
ORF1ab/nsp1226T26IaCtaTt99AY.330.000601
ORF1ab/nsp1226T26IaCtaTt99AY.470.00028
ORF1ab/nsp1226T26TacTacC99B.1.1770.000119
ORF1ab/nsp1226T26AActGct99B.1.2310.290323
ORF1ab/nsp1226T26IaCtaTt99B.1.4270.000454
ORF1ab/nsp1226T26IaCtaTt88AY.450.000973
ORF1ab/nsp1226T26IaCtaTt88B.1.177.70.001319
ORF1ab/nsp1226T26IaCtaTt88B.1.3490.005718
ORF1ab/nsp1226T26IaCtaTt88B.1.6141
ORF1ab/nsp1226T26IaCtaTt77AY.270.000453
ORF1ab/nsp1226T26IaCtaTt77AY.46.10.007187
ORF1ab/nsp1226T26IaCtaTt77AY.70.001372
ORF1ab/nsp1226T26IaCtaTt77AY.9.10.000586
ORF1ab/nsp1226T26IaCtaTt77AY.99.20.000645
ORF1ab/nsp1226T26NaCtaAt77B.10.000064
ORF1ab/nsp1226T26IaCtaTt77B.1.3690.001997
ORF1ab/nsp1226T26IaCtaTt77P.1.40.006836
ORF1ab/nsp1226T26IaCtaTt66AY.230.000418
ORF1ab/nsp1226T26IaCtaTt66AY.980.000474
ORF1ab/nsp1226T26IaCtaTt66B.1.1.1570.005479
ORF1ab/nsp1226T26IaCtaTt66B.1.1.3160.00555
ORF1ab/nsp1226T26IaCtaTt66B.1.221.30.005
ORF1ab/nsp1226T26IaCtaTt66B.1.6090.002876
ORF1ab/nsp1226T26IaCtaTt66B.1.6370.000438
ORF1ab/nsp1226T26IaCtaTt66C.360.005464
ORF1ab/nsp1226T26IaCtaTt66Q.80.000989
ORF1ab/nsp1226T26IaCtaTt55A.23.10.003521
ORF1ab/nsp1226T26TacTacC45AY.250.000024
ORF1ab/nsp1226T26TacTacA15AY.250.000006
ORF1ab/nsp1226T26IaCtaTt55AY.680.001369
ORF1ab/nsp1226T26IaCtaTt55AY.7.10.000564
ORF1ab/nsp1226T26IaCtaTt55AY.75.10.000902
ORF1ab/nsp1226T26IaCtaTt55AY.98.10.000242
ORF1ab/nsp1226T26IaCtaTt55B.1.1.1530.005476
ORF1ab/nsp1226T26IaCtaTt55B.1.1.370.000964
ORF1ab/nsp1226T26IaCtaTt55B.1.1.3850.022321
ORF1ab/nsp1226T26IaCtaTt55B.1.1.700.001705
ORF1ab/nsp1226T26AActGct55B.1.1770.000066
ORF1ab/nsp1226T26IaCtaTt55B.1.177.440.002595
ORF1ab/nsp1226T26IaCtaTt55B.1.177.600.001092
ORF1ab/nsp1226T26IaCtaTt55B.1.177.80.003762
ORF1ab/nsp1226T26IaCtaTt55B.1.6120.013263
ORF1ab/nsp1226T26TacTacC55B.1.617.20.000019
ORF1ab/nsp1226T26IaCtaTt44A.2.50.001996
ORF1ab/nsp1226T26IaCtaTt44A.270.006623
ORF1ab/nsp1226T26IaCtaTt44AY.1000.000184
ORF1ab/nsp1226T26NaCtaAt44AY.1030.000025
ORF1ab/nsp1226T26IaCtaTt44AY.1110.000733
ORF1ab/nsp1226T26TacTacC44AY.340.000388
ORF1ab/nsp1226T26IaCtaTt44AY.380.001997
ORF1ab/nsp1226T26IaCtaTt44AY.39.10.000158
ORF1ab/nsp1226T26IaCtaTt44AY.580.00363
ORF1ab/nsp1226T26IaCtaTt44AY.730.002661
ORF1ab/nsp1226T26IaCtaTt44AY.840.00175
ORF1ab/nsp1226T26IaCtaTt44AY.90.00027
ORF1ab/nsp1226T26IaCtaTt44B.1.1.2540.044944
ORF1ab/nsp1226T26IaCtaTt44B.1.1.3060.001754
ORF1ab/nsp1226T26IaCtaTt44B.1.1.3720.002755
ORF1ab/nsp1226T26IaCtaTt44B.1.1.3750.047619
ORF1ab/nsp1226T26IaCtaTt44B.1.177.690.005935
ORF1ab/nsp1226T26NaCtaAt44B.1.20.000035
ORF1ab/nsp1226T26IaCtaTt44B.1.2220.006768
ORF1ab/nsp1226T26IaCtaTt44B.1.3930.114286
ORF1ab/nsp1226T26IaCtaTt44B.1.438.10.000429
ORF1ab/nsp1226T26IaCtaTt44B.1.4780.047059
ORF1ab/nsp1226T26IaCtaTt44B.1.5610.001588
ORF1ab/nsp1226T26IaCtaTt44C.36.30.002269
ORF1ab/nsp1226T26AActGct44P.10.000063
ORF1ab/nsp1226T26del1Act-ct33All0.000001
ORF1ab/nsp1226T26PActCct33All0.000001
ORF1ab/nsp1226T26IaCtaTt33AY.1160.00086
ORF1ab/nsp1226T26IaCtaTt33AY.1170.000254
ORF1ab/nsp1226T26IaCtaTt33AY.160.001139
ORF1ab/nsp1226T26AActGct33AY.250.000018
ORF1ab/nsp1226T26TacTacC33AY.30.00003
ORF1ab/nsp1226T26IaCtaTt33AY.3.10.000256
ORF1ab/nsp1226T26IaCtaTt33AY.360.000445
ORF1ab/nsp1226T26NaCtaAt33AY.40.000005
ORF1ab/nsp1226T26delACT---33AY.430.000013
ORF1ab/nsp1226T26TacTacC33AY.440.000018
ORF1ab/nsp1226T26IaCtaTt33AY.460.000312
ORF1ab/nsp1226T26IaCtaTt33AY.46.40.000494
ORF1ab/nsp1226T26IaCtaTt33AY.750.000168
ORF1ab/nsp1226T26IaCtaTt33AY.920.000862
ORF1ab/nsp1226T26AActGct33B.1.10.000054
ORF1ab/nsp1226T26IaCtaTt33B.1.1.10.00098
ORF1ab/nsp1226T26IaCtaTt33B.1.1.2200.005576
ORF1ab/nsp1226T26IaCtaTt33B.1.1.3170.001235
ORF1ab/nsp1226T26IaCtaTt33B.1.1.4170.008108
ORF1ab/nsp1226T26AActGct33B.1.1.70.000003
ORF1ab/nsp1226T26IaCtaTt33B.1.177.460.002755
ORF1ab/nsp1226T26IaCtaTt33B.1.258.110.001189
ORF1ab/nsp1226T26IaCtaTt33B.1.258.50.026316
ORF1ab/nsp1226T26IaCtaTt33B.1.360.000438
ORF1ab/nsp1226T26delACT---33B.1.4270.000151
ORF1ab/nsp1226T26IaCtaTt33B.1.4280.003061
ORF1ab/nsp1226T26IaCtaTt33B.1.5750.00091
ORF1ab/nsp1226T26AActGct33B.1.617.20.000011
ORF1ab/nsp1226T26IaCtaTt22A0.000774
ORF1ab/nsp1226T26IaCtaTt22AY.1050.001286
ORF1ab/nsp1226T26IaCtaTt22AY.1060.00067
ORF1ab/nsp1226T26SaCtaGt22AY.1200.000074
ORF1ab/nsp1226T26TacTacC22AY.120.2.10.000997
ORF1ab/nsp1226T26IaCtaTt22AY.1210.000271
ORF1ab/nsp1226T26IaCtaTt22AY.140.000176
ORF1ab/nsp1226T26IaCtaTt22AY.16.10.00094
ORF1ab/nsp1226T26delACT---22AY.250.000012
ORF1ab/nsp1226T26IaCtaTt22AY.4.50.000215
ORF1ab/nsp1226T26NaCtaAt22AY.430.000009
ORF1ab/nsp1226T26IaCtaTt22AY.46.60.000144
ORF1ab/nsp1226T26AActGct22AY.5.20.004926
ORF1ab/nsp1226T26TacTacC22AY.610.00021
ORF1ab/nsp1226T26IaCtaTt22AY.670.000929
ORF1ab/nsp1226T26IaCtaTt22AY.720.002721
ORF1ab/nsp1226T26IaCtaTt22AY.790.002421
ORF1ab/nsp1226T26delACT---22AY.99.20.000184
ORF1ab/nsp1226T26SActTct22B.10.000018
ORF1ab/nsp1226T26delACT---22B.1.10.000036
ORF1ab/nsp1226T26IaCtaTt22B.1.1.1920.004619
ORF1ab/nsp1226T26IaCtaTt22B.1.1.280.000622
ORF1ab/nsp1226T26IaCtaTt22B.1.1.3700.025316
ORF1ab/nsp1226T26IaCtaTt22B.1.1.390.001019
ORF1ab/nsp1226T26IaCtaTt22B.1.1.440.004819
ORF1ab/nsp1226T26IaCtaTt22B.1.1.4480.004065
ORF1ab/nsp1226T26IaCtaTt22B.1.1.4620.017241
ORF1ab/nsp1226T26NaCtaAt22B.1.1.70.000002
ORF1ab/nsp1226T26IaCtaTt22B.1.160.160.001859
ORF1ab/nsp1226T26NaCtaAt22B.1.1770.000026
ORF1ab/nsp1226T26delACT---22B.1.1770.000026
ORF1ab/nsp1226T26IaCtaTt22B.1.177.330.003289
ORF1ab/nsp1226T26IaCtaTt22B.1.177.40.000422
ORF1ab/nsp1226T26IaCtaTt22B.1.177.450.000762
ORF1ab/nsp1226T26IaCtaTt22B.1.177.60.001953
ORF1ab/nsp1226T26IaCtaTt22B.1.177.730.001133
ORF1ab/nsp1226T26delACT---22B.1.20.000018
ORF1ab/nsp1226T26IaCtaTt22B.1.2340.000264
ORF1ab/nsp1226T26IaCtaTt22B.1.2360.004107
ORF1ab/nsp1226T26NaCtaAt22B.1.2430.000139
ORF1ab/nsp1226T26IaCtaTt22B.1.258.30.00335
ORF1ab/nsp1226T26IaCtaTt22B.1.258.70.003824
ORF1ab/nsp1226T26IaCtaTt22B.1.30.005236
ORF1ab/nsp1226T26IaCtaTt22B.1.36.170.000988
ORF1ab/nsp1226T26IaCtaTt22B.1.36.290.001035
ORF1ab/nsp1226T26IaCtaTt22B.1.36.360.001204
ORF1ab/nsp1226T26IaCtaTt22B.1.36.390.004435
ORF1ab/nsp1226T26IaCtaTt22B.1.3670.001585
ORF1ab/nsp1226T26IaCtaTt22B.1.3960.001411
ORF1ab/nsp1226T26NaCtaAt22B.1.3980.005952
ORF1ab/nsp1226T26IaCtaTt22B.1.4030.006536
ORF1ab/nsp1226T26IaCtaTt22B.1.4560.006536
ORF1ab/nsp1226T26IaCtaTt22B.1.5250.000226
ORF1ab/nsp1226T26IaCtaTt22B.1.564.10.003155
ORF1ab/nsp1226T26IaCtaTt22B.1.5820.000981
ORF1ab/nsp1226T26IaCtaTt22B.1.5950.000522
ORF1ab/nsp1226T26IaCtaTt22B.1.595.10.011696
ORF1ab/nsp1226T26IaCtaTt22B.1.6000.011696
ORF1ab/nsp1226T26delACT---22B.1.617.20.000008
ORF1ab/nsp1226T26IaCtaTt22B.1.619.10.001283
ORF1ab/nsp1226T26IaCtaTt22B.350.015625
ORF1ab/nsp1226T26IaCtaTt22B.60.00182
ORF1ab/nsp1226T26IaCtaTt22C.260.014706
ORF1ab/nsp1226T26IaCtaTt22C.350.001548
ORF1ab/nsp1226T26IaCtaTt22D.20.00015
ORF1ab/nsp1226T26IaCtaTt22K.10.047619
ORF1ab/nsp1226T26delACT---22P.10.000032
ORF1ab/nsp1226T26IaCtaTt22P.1.120.000968
ORF1ab/nsp1226T26IaCtaTt22Q.30.00029
ORF1ab/nsp1226T26IaCtaTt11A.10.000282
ORF1ab/nsp1226T26IaCtaTt11A.20.000662
ORF1ab/nsp1226T26IaCtaTt11A.210.00277
ORF1ab/nsp1226T26TacTacC11A.23.10.000704
ORF1ab/nsp1226T26IaCtaTt11AE.40.043478
ORF1ab/nsp1226T26IaCtaTt11AE.70.083333
ORF1ab/nsp1226T26IaCtaTt11AE.80.000489
ORF1ab/nsp1226T26FACtTTt11All0
ORF1ab/nsp1226T26IaCtaTt11AM.40.003571
ORF1ab/nsp1226T26IaCtaTt11AY.10.000396
ORF1ab/nsp1226T26delACT---11AY.1000.000046
ORF1ab/nsp1226T26IaCtaTt11AY.1010.00049
ORF1ab/nsp1226T26AActGct11AY.1020.000027
ORF1ab/nsp1226T26TacTacA11AY.1080.001103
ORF1ab/nsp1226T26IaCtaTt11AY.1090.00074
ORF1ab/nsp1226T26IaCtaTt11AY.1100.000113
ORF1ab/nsp1226T26IaCtaTt11AY.1130.000142
ORF1ab/nsp1226T26TacTacC11AY.1170.000085
ORF1ab/nsp1226T26delACT---11AY.1190.000035
ORF1ab/nsp1226T26IaCtaTt11AY.120.20.001285
ORF1ab/nsp1226T26IaCtaTt11AY.190.00114
ORF1ab/nsp1226T26TacTacG11AY.230.00007
ORF1ab/nsp1226T26IaCtaTt11AY.23.10.000417
ORF1ab/nsp1226T26NaCtaAt11AY.250.000006
ORF1ab/nsp1226T26SaCtaGt11AY.260.000028
ORF1ab/nsp1226T26SaCtaGt11AY.30.00001
ORF1ab/nsp1226T26IaCtaTt11AY.320.000532
ORF1ab/nsp1226T26TacTacA11AY.320.000532
ORF1ab/nsp1226T26SActTct11AY.330.000067
ORF1ab/nsp1226T26AActGct11AY.330.000067
ORF1ab/nsp1226T26IaCtaTt11AY.34.10.00051
ORF1ab/nsp1226T26TacTacC11AY.40.000002
ORF1ab/nsp1226T26delACT---11AY.40.000002
ORF1ab/nsp1226T26SActTct11AY.40.000002
ORF1ab/nsp1226T26IaCtaTt11AY.4.2.10.000149
ORF1ab/nsp1226T26IaCtaTt11AY.4.40.000409
ORF1ab/nsp1226T26delACT---11AY.4.50.000107
ORF1ab/nsp1226T26NaCtaAt11AY.4.50.000107
ORF1ab/nsp1226T26NaCtaAt11AY.440.000006
ORF1ab/nsp1226T26IaCtaTt11AY.480.000465
ORF1ab/nsp1226T26IaCtaTt11AY.5.40.000277
ORF1ab/nsp1226T26IaCtaTt11AY.530.000288
ORF1ab/nsp1226T26IaCtaTt11AY.570.000656
ORF1ab/nsp1226T26IaCtaTt11AY.620.000436
ORF1ab/nsp1226T26IaCtaTt11AY.640.000595
ORF1ab/nsp1226T26IaCtaTt11AY.650.000533
ORF1ab/nsp1226T26TacTacC11AY.670.000464
ORF1ab/nsp1226T26IaCtaTt11AY.690.000187
ORF1ab/nsp1226T26IaCtaTt11AY.7.20.000559
ORF1ab/nsp1226T26IaCtaTt11AY.710.000475
ORF1ab/nsp1226T26delACT---11AY.720.001361
ORF1ab/nsp1226T26delACT---11AY.750.000056
ORF1ab/nsp1226T26delACT---11AY.75.10.00018
ORF1ab/nsp1226T26TacTacC11AY.790.001211
ORF1ab/nsp1226T26IaCtaTt11AY.800.001129
ORF1ab/nsp1226T26IaCtaTt11AY.820.001357
ORF1ab/nsp1226T26IaCtaTt11AY.870.000833
ORF1ab/nsp1226T26NaCtaAt11AY.90.000068
ORF1ab/nsp1226T26AAcTGcC11AY.9.20.000037
ORF1ab/nsp1226T26NaCtaAt11AY.920.000287
ORF1ab/nsp1226T26NaCtaAt11AY.98.10.000048
ORF1ab/nsp1226T26delACT---11AY.990.001049
ORF1ab/nsp1226T26IaCtaTt11AZ.40.003356
ORF1ab/nsp1226T26IaCtaTt11AZ.60.008403
ORF1ab/nsp1226T26del1Act-ct11B0.000128
ORF1ab/nsp1226T26delACT---11B.10.000009
ORF1ab/nsp1226T26TacTacG11B.10.000009
ORF1ab/nsp1226T26TacTacC11B.1.10.000018
ORF1ab/nsp1226T26delACT---11B.1.1.10.000327
ORF1ab/nsp1226T26IaCtaTt11B.1.1.100.001115
ORF1ab/nsp1226T26IaCtaTt11B.1.1.1230.017857
ORF1ab/nsp1226T26IaCtaTt11B.1.1.1350.004695
ORF1ab/nsp1226T26delACT---11B.1.1.1390.022727
ORF1ab/nsp1226T26IaCtaTt11B.1.1.1410.002012
ORF1ab/nsp1226T26IaCtaTt11B.1.1.1640.005155
ORF1ab/nsp1226T26IaCtaTt11B.1.1.1740.003378
ORF1ab/nsp1226T26IaCtaTt11B.1.1.1890.001513
ORF1ab/nsp1226T26IaCtaTt11B.1.1.2070.001182
ORF1ab/nsp1226T26PActCct11B.1.1.2140.000055
ORF1ab/nsp1226T26IaCtaTt11B.1.1.2190.005
ORF1ab/nsp1226T26TacTacA11B.1.1.2220.000204
ORF1ab/nsp1226T26IaCtaTt11B.1.1.2300.009174
ORF1ab/nsp1226T26IaCtaTt11B.1.1.2320.001815
ORF1ab/nsp1226T26SaCtaGt11B.1.1.2630.001558
ORF1ab/nsp1226T26IaCtaTt11B.1.1.2860.002899
ORF1ab/nsp1226T26IaCtaTt11B.1.1.310.066667
ORF1ab/nsp1226T26delACT---11B.1.1.3110.000358
ORF1ab/nsp1226T26IaCtaTt11B.1.1.3110.000358
ORF1ab/nsp1226T26IaCtaTt11B.1.1.3150.008475
ORF1ab/nsp1226T26IaCtaTt11B.1.1.3180.000302
ORF1ab/nsp1226T26delACT---11B.1.1.3480.000796
ORF1ab/nsp1226T26IaCtaTt11B.1.1.3650.005587
ORF1ab/nsp1226T26IaCtaTt11B.1.1.3690.000446
ORF1ab/nsp1226T26IaCtaTt11B.1.1.3740.002375
ORF1ab/nsp1226T26IaCtaTt11B.1.1.3970.002252
ORF1ab/nsp1226T26IaCtaTt11B.1.1.4090.002833
ORF1ab/nsp1226T26IaCtaTt11B.1.1.4200.001006
ORF1ab/nsp1226T26IaCtaTt11B.1.1.4320.001266
ORF1ab/nsp1226T26IaCtaTt11B.1.1.470.005348
ORF1ab/nsp1226T26TacTacC11B.1.1.5190.00004
ORF1ab/nsp1226T26IaCtaTt11B.1.1.5210.005348
ORF1ab/nsp1226T26IaCtaTt11B.1.1.5230.001563
ORF1ab/nsp1226T26AActGct11B.1.1.580.005376
ORF1ab/nsp1226T26IaCtaTt11B.1.1.630.000386
ORF1ab/nsp1226T26PActCct11B.1.1.70.000001
ORF1ab/nsp1226T26delACT---11B.1.1.700.000341
ORF1ab/nsp1226T26IaCtaTt11B.1.1.900.1
ORF1ab/nsp1226T26IaCtaTt11B.1.1570.002985
ORF1ab/nsp1226T26delACT---11B.1.1600.000031
ORF1ab/nsp1226T26IaCtaTt11B.1.160.120.00641
ORF1ab/nsp1226T26IaCtaTt11B.1.160.230.004831
ORF1ab/nsp1226T26IaCtaTt11B.1.160.70.002079
ORF1ab/nsp1226T26delACT---11B.1.1610.017241
ORF1ab/nsp1226T26IaCtaTt11B.1.1690.014925
ORF1ab/nsp1226T26del1Act-ct11B.1.1770.000013
ORF1ab/nsp1226T26IaCtaTt11B.1.177.120.000152
ORF1ab/nsp1226T26IaCtaTt11B.1.177.160.000664
ORF1ab/nsp1226T26IaCtaTt11B.1.177.20.004545
ORF1ab/nsp1226T26TacTacC11B.1.177.40.000211
ORF1ab/nsp1226T26IaCtaTt11B.1.177.520.001757
ORF1ab/nsp1226T26PActCct11B.1.177.530.002392
ORF1ab/nsp1226T26IaCtaTt11B.1.177.540.000606
ORF1ab/nsp1226T26IaCtaTt11B.1.177.570.000281
ORF1ab/nsp1226T26SaCtaGt11B.1.177.570.000281
ORF1ab/nsp1226T26TacTacC11B.1.177.70.000165
ORF1ab/nsp1226T26FACtTTt11B.1.177.770.000726
ORF1ab/nsp1226T26IaCtaTt11B.1.177.810.000189
ORF1ab/nsp1226T26IaCtaTt11B.1.177.820.000477
ORF1ab/nsp1226T26IaCtaTt11B.1.177.830.001481
ORF1ab/nsp1226T26IaCtaTt11B.1.177.870.000728
ORF1ab/nsp1226T26IaCtaTt11B.1.1950.005025
ORF1ab/nsp1226T26AActGct11B.1.20.000009
ORF1ab/nsp1226T26SaCtaGt11B.1.20.000009
ORF1ab/nsp1226T26IaCtaTt11B.1.2060.000816
ORF1ab/nsp1226T26IaCtaTt11B.1.2180.005155
ORF1ab/nsp1226T26TacTacC11B.1.2210.000071
ORF1ab/nsp1226T26IaCtaTt11B.1.2400.000216
ORF1ab/nsp1226T26delACT---11B.1.258.100.011364
ORF1ab/nsp1226T26IaCtaTt11B.1.258.170.000104
ORF1ab/nsp1226T26IaCtaTt11B.1.2650.001271
ORF1ab/nsp1226T26IaCtaTt11B.1.2930.0125
ORF1ab/nsp1226T26IaCtaTt11B.1.3110.000275
ORF1ab/nsp1226T26IaCtaTt11B.1.3240.001605
ORF1ab/nsp1226T26IaCtaTt11B.1.3400.004292
ORF1ab/nsp1226T26IaCtaTt11B.1.351.30.000876
ORF1ab/nsp1226T26TacTacC11B.1.360.000146
ORF1ab/nsp1226T26IaCtaTt11B.1.36.220.001208
ORF1ab/nsp1226T26IaCtaTt11B.1.36.310.001751
ORF1ab/nsp1226T26IaCtaTt11B.1.3610.001289
ORF1ab/nsp1226T26IaCtaTt11B.1.3620.001541
ORF1ab/nsp1226T26TacTacC11B.1.3750.00082
ORF1ab/nsp1226T26IaCtaTt11B.1.3800.006623
ORF1ab/nsp1226T26IaCtaTt11B.1.4020.009804
ORF1ab/nsp1226T26delACT---11B.1.4150.014286
ORF1ab/nsp1226T26IaCtaTt11B.1.4220.000812
ORF1ab/nsp1226T26delACT---11B.1.4460.02
ORF1ab/nsp1226T26NaCtaAt11B.1.466.20.000391
ORF1ab/nsp1226T26IaCtaTt11B.1.4690.00361
ORF1ab/nsp1226T26IaCtaTt11B.1.4700.001404
ORF1ab/nsp1226T26IaCtaTt11B.1.4800.002488
ORF1ab/nsp1226T26IaCtaTt11B.1.4980.020408
ORF1ab/nsp1226T26TacTacC11B.1.4980.020408
ORF1ab/nsp1226T26del1Act-ct11B.1.5010.007353
ORF1ab/nsp1226T26IaCtaTt11B.1.5490.007194
ORF1ab/nsp1226T26IaCtaTt11B.1.5650.00081
ORF1ab/nsp1226T26AActGct11B.1.5750.000303
ORF1ab/nsp1226T26IaCtaTt11B.1.5870.001898
ORF1ab/nsp1226T26IaCtaTt11B.1.5880.00091
ORF1ab/nsp1226T26NaCtaAt11B.1.617.20.000004
ORF1ab/nsp1226T26IaCtaTt11B.1.617.30.002985
ORF1ab/nsp1226T26IaCtaTt11B.1.6200.000946
ORF1ab/nsp1226T26IaCtaTt11B.1.6250.002353
ORF1ab/nsp1226T26IaCtaTt11B.1.6270.00202
ORF1ab/nsp1226T26IaCtaTt11B.1.9.40.006135
ORF1ab/nsp1226T26IaCtaTt11B.1.9.50.005682
ORF1ab/nsp1226T26IaCtaTt11B.1.940.027027
ORF1ab/nsp1226T26IaCtaTt11B.6.60.000889
ORF1ab/nsp1226T26SaCtaGt11C.160.00106
ORF1ab/nsp1226T26IaCtaTt11C.160.00106
ORF1ab/nsp1226T26delACT---11C.170.055556
ORF1ab/nsp1226T26TacTacA11C.350.000774
ORF1ab/nsp1226T26NaCtaAt11C.350.000774
ORF1ab/nsp1226T26delACT---11C.370.000116
ORF1ab/nsp1226T26TacTacG11D.20.000075
ORF1ab/nsp1226T26IaCtaTt11L.10.001905
ORF1ab/nsp1226T26IaCtaTt11N.10.016949
ORF1ab/nsp1226T26NaCtaAt11P.10.000016
ORF1ab/nsp1226T26IaCtaTt11P.1.10.000318
ORF1ab/nsp1226T26IaCtaTt11P.1.130.000898
ORF1ab/nsp1226T26TacTacC11P.1.140.000048
ORF1ab/nsp1226T26delACT---11P.1.150.000232
ORF1ab/nsp1226T26IaCtaTt11P.1.160.000374
ORF1ab/nsp1226T26delACT---11P.20.000187
ORF1ab/nsp1226T26NaCtaAt11Q.10.000126
ORF1ab/nsp1226T26IaCtaTt11Q.70.001111
ORF1ab/nsp1226T26IaCtaTt11U.30.003861
ORF1ab/nsp1226T26IaCtaTt11Z.10.00289