CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 254 & Codon = gaT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12254E254DE4646DnonsyngaGgaT533553310.9992514200-14202

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12254E254DgaGgaT53315335All0.00102
ORF1ab/nsp12254E254DgaGgaT45554555AD.20.997372
ORF1ab/nsp12254E254DgaGgaT240240AD.10.987654
ORF1ab/nsp12254E254DgaGgaT118119AY.1030.000733
ORF1ab/nsp12254E254DgaGgaT106106B.1.1.3150.898305
ORF1ab/nsp12254E254DgaGgaT3839B.1.1.70.000034
ORF1ab/nsp12254E254DgaGgaT2929B.10.000266
ORF1ab/nsp12254E254DgaGgaT2323AY.40.000036
ORF1ab/nsp12254E254DgaGgaT2222AD.2.11
ORF1ab/nsp12254E254DgaGgaT2222R.10.00198
ORF1ab/nsp12254E254DgaGgaT1717B.1.617.20.000064
ORF1ab/nsp12254E254DgaGgaT1313AY.430.000058
ORF1ab/nsp12254E254DgaGgaT1111B.1.10.0002
ORF1ab/nsp12254E254DgaGgaT99B.1.1.2530.022556
ORF1ab/nsp12254E254DgaGgaT99B.1.1770.000119
ORF1ab/nsp12254E254DgaGgaT66AY.140.000528
ORF1ab/nsp12254E254DgaGgaT66AY.30.00006
ORF1ab/nsp12254E254DgaGgaT55B.1.20.000044
ORF1ab/nsp12254E254DgaGgaT55C.370.00058
ORF1ab/nsp12254E254DgaGgaT55Q.40.002274
ORF1ab/nsp12254E254DgaGgaT44AY.1000.000184
ORF1ab/nsp12254E254DgaGgaT44B.1.2580.000266
ORF1ab/nsp12254E254DgaGgaT44B.1.4290.000094
ORF1ab/nsp12254E254DgaGgaT33AY.1190.000106
ORF1ab/nsp12254E254DgaGgaT33AY.330.0002
ORF1ab/nsp12254E254DgaGgaT33AY.390.000074
ORF1ab/nsp12254E254DgaGgaT33AY.540.000286
ORF1ab/nsp12254E254DgaGgaT33B.1.4000.001287
ORF1ab/nsp12254E254DgaGgaT22AY.20.000712
ORF1ab/nsp12254E254DgaGgaT22AY.250.000012
ORF1ab/nsp12254E254DgaGgaT22AY.4.20.000043
ORF1ab/nsp12254E254DgaGgaT22B.1.1.250.001137
ORF1ab/nsp12254E254DgaGgaT22B.1.1.2580.006515
ORF1ab/nsp12254E254DgaGgaT22B.1.1.3010.002358
ORF1ab/nsp12254E254DgaGgaT22B.1.1600.000062
ORF1ab/nsp12254E254DgaGgaT22B.1.3510.000059
ORF1ab/nsp12254E254DgaGgaT22B.1.4110.007407
ORF1ab/nsp12254E254DgaGgaT22B.1.5250.000226
ORF1ab/nsp12254E254DgaGgaT22B.1.5960.000174
ORF1ab/nsp12254E254DgaGgaT22B.1.6280.000705
ORF1ab/nsp12254E254DgaGgaT22P.10.000032
ORF1ab/nsp12254E254DgaGgaT11AP.10.001502
ORF1ab/nsp12254E254DgaGgaT11AT.10.005128
ORF1ab/nsp12254E254DgaGgaT11AY.1010.00049
ORF1ab/nsp12254E254DgaGgaT11AY.1020.000027
ORF1ab/nsp12254E254DgaGgaT11AY.1050.000643
ORF1ab/nsp12254E254DgaGgaT11AY.1170.000085
ORF1ab/nsp12254E254DgaGgaT11AY.1180.000063
ORF1ab/nsp12254E254DgaGgaT11AY.1210.000135
ORF1ab/nsp12254E254DgaGgaT11AY.290.000016
ORF1ab/nsp12254E254DgaGgaT11AY.4.50.000107
ORF1ab/nsp12254E254DgaGgaT11AY.470.000031
ORF1ab/nsp12254E254DgaGgaT11AY.50.000021
ORF1ab/nsp12254E254DgaGgaT11AY.530.000288
ORF1ab/nsp12254E254DgaGgaT11AY.60.000041
ORF1ab/nsp12254E254DgaGgaT11AY.750.000056
ORF1ab/nsp12254E254DgaGgaT11B0.000128
ORF1ab/nsp12254E254DgaGgaT11B.1.1.1410.002012
ORF1ab/nsp12254E254DgaGgaT11B.1.1.2160.00089
ORF1ab/nsp12254E254DgaGgaT11B.1.1.270.00565
ORF1ab/nsp12254E254DgaGgaT11B.1.1.3690.000446
ORF1ab/nsp12254E254DgaGgaT11B.1.1.4090.002833
ORF1ab/nsp12254E254DgaGgaT11B.1.1150.021739
ORF1ab/nsp12254E254DgaGgaT11B.1.177.820.000477
ORF1ab/nsp12254E254DgaGgaT11B.1.2210.000071
ORF1ab/nsp12254E254DgaGgaT11B.1.2380.014925
ORF1ab/nsp12254E254DgaGgaT11B.1.2400.000216
ORF1ab/nsp12254E254DgaGgaT11B.1.360.000146
ORF1ab/nsp12254E254DgaGgaT11B.1.36.170.000494
ORF1ab/nsp12254E254DgaGgaT11B.1.3890.001002
ORF1ab/nsp12254E254DgaGgaT11B.1.4130.004255
ORF1ab/nsp12254E254DgaGgaT11B.1.4160.001269
ORF1ab/nsp12254E254DgaGgaT11B.1.4270.00005
ORF1ab/nsp12254E254DgaGgaT11B.1.4520.013699
ORF1ab/nsp12254E254DgaGgaT11B.1.4990.00105
ORF1ab/nsp12254E254DgaGgaT11B.1.617.10.000129
ORF1ab/nsp12254E254DgaGgaT11B.230.002924
ORF1ab/nsp12254E254DgaGgaT11C.10.002392
ORF1ab/nsp12254E254DgaGgaT11C.160.00106
ORF1ab/nsp12254E254DgaGgaT11D.20.000075