CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 254 & Codon = gaA

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12254E254EE4646EsyngaGgaA683683114200-14202

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12254E254EgaGgaA683683All0.000131
ORF1ab/nsp12254E254EgaGgaA295295B.1.1.70.000264
ORF1ab/nsp12254E254EgaGgaA119119B.1.1770.001567
ORF1ab/nsp12254E254EgaGgaA7979AY.440.000481
ORF1ab/nsp12254E254EgaGgaA2525AY.1030.000155
ORF1ab/nsp12254E254EgaGgaA2424B.1.1600.000749
ORF1ab/nsp12254E254EgaGgaA1919AY.260.000538
ORF1ab/nsp12254E254EgaGgaA1414B.1.2430.000974
ORF1ab/nsp12254E254EgaGgaA99AY.40.000014
ORF1ab/nsp12254E254EgaGgaA88AY.120.2.10.003986
ORF1ab/nsp12254E254EgaGgaA77AY.30.00007
ORF1ab/nsp12254E254EgaGgaA77B.1.4270.000353
ORF1ab/nsp12254E254EgaGgaA66AY.4.40.002455
ORF1ab/nsp12254E254EgaGgaA66AY.46.60.000433
ORF1ab/nsp12254E254EgaGgaA55B.1.617.20.000019
ORF1ab/nsp12254E254EgaGgaA44B.10.000037
ORF1ab/nsp12254E254EgaGgaA44B.1.20.000035
ORF1ab/nsp12254E254EgaGgaA44B.1.2650.005083
ORF1ab/nsp12254E254EgaGgaA33AY.1190.000106
ORF1ab/nsp12254E254EgaGgaA33AY.290.000047
ORF1ab/nsp12254E254EgaGgaA33AY.350.000699
ORF1ab/nsp12254E254EgaGgaA33Q.80.000495
ORF1ab/nsp12254E254EgaGgaA22AY.430.000009
ORF1ab/nsp12254E254EgaGgaA22AY.750.000112
ORF1ab/nsp12254E254EgaGgaA22AY.90.000135
ORF1ab/nsp12254E254EgaGgaA22B.1.1.5190.000079
ORF1ab/nsp12254E254EgaGgaA22B.1.2400.000431
ORF1ab/nsp12254E254EgaGgaA22P.1.40.001953
ORF1ab/nsp12254E254EgaGgaA110.055556
ORF1ab/nsp12254E254EgaGgaA11AY.1000.000046
ORF1ab/nsp12254E254EgaGgaA11AY.1130.000142
ORF1ab/nsp12254E254EgaGgaA11AY.16.10.00047
ORF1ab/nsp12254E254EgaGgaA11AY.200.000039
ORF1ab/nsp12254E254EgaGgaA11AY.230.00007
ORF1ab/nsp12254E254EgaGgaA11AY.250.000006
ORF1ab/nsp12254E254EgaGgaA11AY.360.000148
ORF1ab/nsp12254E254EgaGgaA11AY.390.000025
ORF1ab/nsp12254E254EgaGgaA11AY.39.10.00004
ORF1ab/nsp12254E254EgaGgaA11AY.460.000104
ORF1ab/nsp12254E254EgaGgaA11B.1.10.000018
ORF1ab/nsp12254E254EgaGgaA11B.1.1.2140.000055
ORF1ab/nsp12254E254EgaGgaA11B.1.1.3480.000796
ORF1ab/nsp12254E254EgaGgaA11B.1.1.5230.001563
ORF1ab/nsp12254E254EgaGgaA11B.1.177.120.000152
ORF1ab/nsp12254E254EgaGgaA11B.1.2210.000071
ORF1ab/nsp12254E254EgaGgaA11B.1.4590.004082
ORF1ab/nsp12254E254EgaGgaA11B.1.5510.00129
ORF1ab/nsp12254E254EgaGgaA11B.1.5960.000087
ORF1ab/nsp12254E254EgaGgaA11B.1.6180.004032
ORF1ab/nsp12254E254EgaGgaA11C.320.023256
ORF1ab/nsp12254E254EgaGgaA11P.1.140.000048
ORF1ab/nsp12254E254EgaGgaA11P.20.000187