CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 253 & Codon = gcT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12253A253AA4645AsyngcAgcT528570.10795514197-14199

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12253A253AgcAgcT57528All0.000011
ORF1ab/nsp12253A253AgcAgcT7144B.1.1.70.000006
ORF1ab/nsp12253A253AgcAgcT1130B.1.20.000009
ORF1ab/nsp12253A253AgcAgcT531B.10.000046
ORF1ab/nsp12253A253AgcAgcT1023AY.30.000099
ORF1ab/nsp12253A253AgcAgcT913AY.40.000014
ORF1ab/nsp12253A253AgcAgcT111B.1.617.20.000004
ORF1ab/nsp12253A253AgcAgcT77B.1.350.11
ORF1ab/nsp12253A253AgcAgcT16AY.440.000006
ORF1ab/nsp12253A253AgcAgcT36P.10.000047
ORF1ab/nsp12253A253AgcAgcT35AY.250.000018
ORF1ab/nsp12253A253AgcAgcT33B.1.1.5190.000119
ORF1ab/nsp12253A253AgcAgcT12AY.1190.000035
ORF1ab/nsp12253A253AgcAgcT22B.1.2210.000142
ORF1ab/nsp12253A253AgcAgcT11AY.590.00053
ORF1ab/nsp12253A253AgcAgcT11AY.740.000116
ORF1ab/nsp12253A253AgcAgcT11B.1.1.370.000193
ORF1ab/nsp12253A253AgcAgcT11B.1.4590.004082