CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 246

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12246T246TT4638TsynacCacT736570200.95315714176-14178
ORF1ab/nsp12246T246TT4638TsynacCacA73653130.042498314176-14178
ORF1ab/nsp12246T246TT4638TsynacCacG7365320.0043448714176-14178
ORF1ab/nsp12246T246IT4638InonsynaCcaTc127612680.9937314176-14178
ORF1ab/nsp12246T246IT4638InonsynaCCaTT127680.0062695914176-14178
ORF1ab/nsp12246T246NT4638NnonsynaCcaAc100960.9614176-14178
ORF1ab/nsp12246T246NT4638NnonsynaCCaAT10040.0414176-14178
ORF1ab/nsp12246T246delT4638deldelACC---1717114176-14178
ORF1ab/nsp12246T246AT4638AnonsynAccGcc16150.937514176-14178
ORF1ab/nsp12246T246AT4638AnonsynAcCGcT1610.062514176-14178
ORF1ab/nsp12246T246ST4638SnonsynAccTcc430.7514176-14178
ORF1ab/nsp12246T246ST4638SnonsynaCcaGc410.2514176-14178
ORF1ab/nsp12246T246PT4638PnonsynAccCcc33114176-14178
ORF1ab/nsp12246T246DT4638DnonsynACCGAT210.514176-14178
ORF1ab/nsp12246T246DT4638DnonsynACcGAc210.514176-14178
ORF1ab/nsp12246T246del2T4638del2delACc--c11114176-14178
ORF1ab/nsp12246T246del1T4638del1delaCca-c11114176-14178

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12246T246TacCacT70207365All0.001343
ORF1ab/nsp12246T246TacCacA3137365All0.00006
ORF1ab/nsp12246T246TacCacG327365All0.000006
ORF1ab/nsp12246T246IaCcaTc12681276All0.000243
ORF1ab/nsp12246T246IaCCaTT81276All0.000002
ORF1ab/nsp12246T246TacCacT10911154B.1.1.70.000977
ORF1ab/nsp12246T246TacCacA631154B.1.1.70.000056
ORF1ab/nsp12246T246TacCacT10341042B.1.617.20.003893
ORF1ab/nsp12246T246TacCacA81042B.1.617.20.00003
ORF1ab/nsp12246T246TacCacT9811004AY.430.004346
ORF1ab/nsp12246T246TacCacG201004AY.430.000089
ORF1ab/nsp12246T246TacCacA31004AY.430.000013
ORF1ab/nsp12246T246TacCacT390401AY.40.000607
ORF1ab/nsp12246T246TacCacA11401AY.40.000017
ORF1ab/nsp12246T246TacCacT391395B.1.20.003443
ORF1ab/nsp12246T246TacCacA3395B.1.20.000026
ORF1ab/nsp12246T246TacCacG1395B.1.20.000009
ORF1ab/nsp12246T246IaCcaTc317317AY.40.000493
ORF1ab/nsp12246T246TacCacT281286AY.1030.001745
ORF1ab/nsp12246T246TacCacA4286AY.1030.000025
ORF1ab/nsp12246T246TacCacG1286AY.1030.000006
ORF1ab/nsp12246T246TacCacT166166AY.4.20.0036
ORF1ab/nsp12246T246TacCacT110133B.10.001008
ORF1ab/nsp12246T246TacCacA23133B.10.000211
ORF1ab/nsp12246T246TacCacT126130AY.440.000767
ORF1ab/nsp12246T246TacCacA4130AY.440.000024
ORF1ab/nsp12246T246TacCacT128128B.1.1.470.684492
ORF1ab/nsp12246T246TacCacA127127B.1.5010.933824
ORF1ab/nsp12246T246TacCacT122122AY.390.003015
ORF1ab/nsp12246T246IaCcaTc109112B.1.1.70.000098
ORF1ab/nsp12246T246IaCCaTT3112B.1.1.70.000003
ORF1ab/nsp12246T246TacCacT105105B.1.1.2160.0935
ORF1ab/nsp12246T246TacCacT102103B.1.10.00185
ORF1ab/nsp12246T246TacCacA1103B.1.10.000018
ORF1ab/nsp12246T246NaCcaAc96100All0.000018
ORF1ab/nsp12246T246NaCCaAT4100All0.000001
ORF1ab/nsp12246T246TacCacT9697AY.250.000577
ORF1ab/nsp12246T246TacCacA197AY.250.000006
ORF1ab/nsp12246T246TacCacT7878B.1.2210.005541
ORF1ab/nsp12246T246TacCacT7070B.1.6280.024665
ORF1ab/nsp12246T246TacCacT5765AY.1020.001511
ORF1ab/nsp12246T246TacCacA865AY.1020.000212
ORF1ab/nsp12246T246TacCacT6363B.1.177.180.073086
ORF1ab/nsp12246T246TacCacT6061B.1.1.5190.002383
ORF1ab/nsp12246T246TacCacA161B.1.1.5190.00004
ORF1ab/nsp12246T246TacCacT6061B.1.1770.00079
ORF1ab/nsp12246T246TacCacA161B.1.1770.000013
ORF1ab/nsp12246T246IaCcaTc5959B.1.617.20.000222
ORF1ab/nsp12246T246IaCcaTc5656AY.30.000557
ORF1ab/nsp12246T246IaCcaTc5656B.1.438.10.006007
ORF1ab/nsp12246T246NaCcaAc5353AY.1030.000329
ORF1ab/nsp12246T246TacCacT5153B.1.4290.0012
ORF1ab/nsp12246T246TacCacA153B.1.4290.000024
ORF1ab/nsp12246T246TacCacG153B.1.4290.000024
ORF1ab/nsp12246T246TacCacT4251P.10.000662
ORF1ab/nsp12246T246TacCacG751P.10.00011
ORF1ab/nsp12246T246TacCacA251P.10.000032
ORF1ab/nsp12246T246TacCacT4949P.1.160.018331
ORF1ab/nsp12246T246IaCcaTc4848B.1.20.000423
ORF1ab/nsp12246T246IaCcaTc4646B.1.2790.023626
ORF1ab/nsp12246T246TacCacT4444AY.30.000438
ORF1ab/nsp12246T246TacCacT4242AY.120.013274
ORF1ab/nsp12246T246IaCcaTc4242AY.440.000256
ORF1ab/nsp12246T246IaCcaTc4040AY.250.000241
ORF1ab/nsp12246T246TacCacT3939AY.1190.001377
ORF1ab/nsp12246T246IaCcaTc3838B.1.4290.000894
ORF1ab/nsp12246T246TacCacT3737AY.460.003851
ORF1ab/nsp12246T246TacCacT3737B.1.1.2220.007548
ORF1ab/nsp12246T246TacCacT3536B.1.1600.001092
ORF1ab/nsp12246T246TacCacA136B.1.1600.000031
ORF1ab/nsp12246T246TacCacT3535AY.50.000723
ORF1ab/nsp12246T246NaCcaAc3434B.1.617.20.000128
ORF1ab/nsp12246T246IaCcaTc3131B.1.5750.009405
ORF1ab/nsp12246T246TacCacT2830AY.750.001569
ORF1ab/nsp12246T246TacCacA230AY.750.000112
ORF1ab/nsp12246T246TacCacT2929AY.1040.05754
ORF1ab/nsp12246T246TacCacT2727B.1.1.3180.008147
ORF1ab/nsp12246T246TacCacT2626B.1.617.10.003353
ORF1ab/nsp12246T246TacCacT2526B.1.6210.002213
ORF1ab/nsp12246T246TacCacA126B.1.6210.000089
ORF1ab/nsp12246T246IaCcaTc2424B.10.00022
ORF1ab/nsp12246T246TacCacT2323AY.1200.000855
ORF1ab/nsp12246T246TacCacT2222B.1.5260.000517
ORF1ab/nsp12246T246TacCacT2121AY.290.000331
ORF1ab/nsp12246T246TacCacT1921AY.39.10.000753
ORF1ab/nsp12246T246TacCacA221AY.39.10.000079
ORF1ab/nsp12246T246TacCacT2121AY.840.009186
ORF1ab/nsp12246T246TacCacT2020AY.1170.00169
ORF1ab/nsp12246T246TacCacT1720AY.200.000661
ORF1ab/nsp12246T246TacCacA320AY.200.000117
ORF1ab/nsp12246T246TacCacT1919B.1.2430.001322
ORF1ab/nsp12246T246TacCacT1919B.1.351.20.005749
ORF1ab/nsp12246T246IaCcaTc1818B.1.10.000327
ORF1ab/nsp12246T246TacCacT1818B.1.3510.000535
ORF1ab/nsp12246T246TacCacT1818C.360.016393
ORF1ab/nsp12246T246delACC---1717All0.000003
ORF1ab/nsp12246T246IaCcaTc1717AY.430.000075
ORF1ab/nsp12246T246IaCcaTc1717B.1.5950.004436
ORF1ab/nsp12246T246TacCacT1717C.37.10.044503
ORF1ab/nsp12246T246IaCcaTc1616A0.006192
ORF1ab/nsp12246T246AAccGcc1516All0.000003
ORF1ab/nsp12246T246AAcCGcT116All0
ORF1ab/nsp12246T246TacCacT1515AY.99.20.001382
ORF1ab/nsp12246T246IaCcaTc1414AY.1030.000087
ORF1ab/nsp12246T246IaCcaTc1414AY.260.000396
ORF1ab/nsp12246T246TacCacT1414B.1.438.10.001502
ORF1ab/nsp12246T246IaCcaTc1213AY.1000.000552
ORF1ab/nsp12246T246IaCCaTT113AY.1000.000046
ORF1ab/nsp12246T246TacCacT1213AY.260.00034
ORF1ab/nsp12246T246TacCacA113AY.260.000028
ORF1ab/nsp12246T246TacCacT713AY.46.40.001152
ORF1ab/nsp12246T246TacCacA613AY.46.40.000987
ORF1ab/nsp12246T246TacCacT1313R.10.00117
ORF1ab/nsp12246T246TacCacT812AY.420.000322
ORF1ab/nsp12246T246TacCacA412AY.420.000161
ORF1ab/nsp12246T246TacCacT1212B.1.2320.006448
ORF1ab/nsp12246T246IaCcaTc1212P.10.000189
ORF1ab/nsp12246T246TacCacT1212P.1.140.000574
ORF1ab/nsp12246T246IaCcaTc1111AY.1020.000292
ORF1ab/nsp12246T246TacCacT1011AY.5.40.002767
ORF1ab/nsp12246T246TacCacA111AY.5.40.000277
ORF1ab/nsp12246T246TacCacT1111AY.98.10.000533
ORF1ab/nsp12246T246TacCacT1111B.1.1.2140.00061
ORF1ab/nsp12246T246TacCacT811B.1.1.630.003086
ORF1ab/nsp12246T246TacCacA311B.1.1.630.001157
ORF1ab/nsp12246T246TacCacT1111B.1.1280.006989
ORF1ab/nsp12246T246TacCacT1010AY.1000.00046
ORF1ab/nsp12246T246TacCacT910AY.1160.002581
ORF1ab/nsp12246T246TacCacA110AY.1160.000287
ORF1ab/nsp12246T246TacCacT1010AY.230.000697
ORF1ab/nsp12246T246TacCacT1010AY.3.10.000853
ORF1ab/nsp12246T246TacCacT1010B.1.258.170.00104
ORF1ab/nsp12246T246TacCacT1010Q.80.001649
ORF1ab/nsp12246T246TacCacT99A.30.018868
ORF1ab/nsp12246T246TacCacT99AY.740.001041
ORF1ab/nsp12246T246IaCcaTc99B.1.1.2860.026087
ORF1ab/nsp12246T246TacCacT99B.1.1.3040.025281
ORF1ab/nsp12246T246TacCacT99B.1.360.001313
ORF1ab/nsp12246T246TacCacT59B.1.6370.000365
ORF1ab/nsp12246T246TacCacA49B.1.6370.000292
ORF1ab/nsp12246T246IaCcaTc88AY.370.002528
ORF1ab/nsp12246T246TacCacT88AY.60.000329
ORF1ab/nsp12246T246TacCacT88AY.980.000632
ORF1ab/nsp12246T246IaCcaTc88B.1.1.2740.040404
ORF1ab/nsp12246T246TacCacT78B.1.177.810.001325
ORF1ab/nsp12246T246TacCacA18B.1.177.810.000189
ORF1ab/nsp12246T246TacCacT88B.1.177.860.001468
ORF1ab/nsp12246T246TacCacT48C.36.30.002269
ORF1ab/nsp12246T246TacCacA48C.36.30.002269
ORF1ab/nsp12246T246IaCcaTc77AY.98.10.000339
ORF1ab/nsp12246T246TacCacT77B.1.1.280.002179
ORF1ab/nsp12246T246TacCacT77B.1.177.560.004673
ORF1ab/nsp12246T246IaCcaTc77B.1.2430.000487
ORF1ab/nsp12246T246TacCacT77B.1.36.290.003621
ORF1ab/nsp12246T246TacCacT77B.1.4590.028571
ORF1ab/nsp12246T246TacCacT66AY.1210.000812
ORF1ab/nsp12246T246IaCcaTc66AY.290.000095
ORF1ab/nsp12246T246TacCacT66AY.320.003195
ORF1ab/nsp12246T246IaCcaTc66AY.420.000241
ORF1ab/nsp12246T246TacCacT66AY.470.000187
ORF1ab/nsp12246T246IaCcaTc56AY.50.000103
ORF1ab/nsp12246T246IaCCaTT16AY.50.000021
ORF1ab/nsp12246T246IaCcaTc66AY.9.20.00022
ORF1ab/nsp12246T246TacCacT66B.1.1.10.00196
ORF1ab/nsp12246T246delACC---66B.1.1.70.000005
ORF1ab/nsp12246T246IaCcaTc66B.1.1770.000079
ORF1ab/nsp12246T246TacCacT66B.1.177.70.000989
ORF1ab/nsp12246T246TacCacT66B.1.177.770.004357
ORF1ab/nsp12246T246TacCacT66B.1.2580.000399
ORF1ab/nsp12246T246TacCacT46B.1.3690.001141
ORF1ab/nsp12246T246TacCacA26B.1.3690.00057
ORF1ab/nsp12246T246IaCcaTc66B.1.4250.017964
ORF1ab/nsp12246T246IaCcaTc46B.1.4270.000202
ORF1ab/nsp12246T246IaCCaTT26B.1.4270.000101
ORF1ab/nsp12246T246IaCcaTc66P.1.170.000971
ORF1ab/nsp12246T246TacCacT55AY.1110.000916
ORF1ab/nsp12246T246IaCcaTc55AY.1200.000186
ORF1ab/nsp12246T246TacCacT55AY.16.10.00235
ORF1ab/nsp12246T246TacCacT55AY.29.10.001103
ORF1ab/nsp12246T246TacCacT55AY.330.000334
ORF1ab/nsp12246T246IaCcaTc55AY.470.000156
ORF1ab/nsp12246T246TacCacT55AY.5.30.001687
ORF1ab/nsp12246T246TacCacT55AY.590.002648
ORF1ab/nsp12246T246IaCcaTc55AY.610.000524
ORF1ab/nsp12246T246TacCacT55AY.880.004421
ORF1ab/nsp12246T246TacCacT55B.1.1.2650.015773
ORF1ab/nsp12246T246TacCacT55B.1.1.3700.063291
ORF1ab/nsp12246T246TacCacT55B.1.1.700.001705
ORF1ab/nsp12246T246IaCcaTc55B.1.2340.00066
ORF1ab/nsp12246T246TacCacT55B.1.5250.000566
ORF1ab/nsp12246T246IaCcaTc55B.1.5260.000118
ORF1ab/nsp12246T246IaCcaTc55B.1.5960.000436
ORF1ab/nsp12246T246IaCcaTc55C.360.004554
ORF1ab/nsp12246T246IaCcaTc55P.20.000933
ORF1ab/nsp12246T246SAccTcc34All0.000001
ORF1ab/nsp12246T246SaCcaGc14All0
ORF1ab/nsp12246T246TacCacT44AY.340.000388
ORF1ab/nsp12246T246IaCcaTc44AY.390.000099
ORF1ab/nsp12246T246IaCcaTc44AY.4.50.00043
ORF1ab/nsp12246T246IaCcaTc44AY.450.000487
ORF1ab/nsp12246T246TacCacT44AY.46.60.000289
ORF1ab/nsp12246T246TacCacT44AY.610.000419
ORF1ab/nsp12246T246TacCacT44AY.730.002661
ORF1ab/nsp12246T246TacCacT44AY.75.10.000721
ORF1ab/nsp12246T246TacCacT44AY.9.20.000147
ORF1ab/nsp12246T246TacCacT44AY.910.002922
ORF1ab/nsp12246T246TacCacT44AY.920.001149
ORF1ab/nsp12246T246TacCacT44AY.940.001771
ORF1ab/nsp12246T246TacCacT34B0.000383
ORF1ab/nsp12246T246TacCacA14B0.000128
ORF1ab/nsp12246T246TacCacT44B.1.1.250.002274
ORF1ab/nsp12246T246TacCacT44B.1.1.3160.0037
ORF1ab/nsp12246T246TacCacT44B.1.1.3970.009009
ORF1ab/nsp12246T246AAccGcc44B.1.1.5190.000159
ORF1ab/nsp12246T246TacCacT44B.1.2410.003247
ORF1ab/nsp12246T246IaCcaTc44B.1.36.170.001976
ORF1ab/nsp12246T246TacCacT44B.1.36.360.002408
ORF1ab/nsp12246T246TacCacT44B.1.3610.005155
ORF1ab/nsp12246T246TacCacT34B.1.4270.000151
ORF1ab/nsp12246T246TacCacA14B.1.4270.00005
ORF1ab/nsp12246T246AAccGcc44B.1.5760.003626
ORF1ab/nsp12246T246TacCacT34B.1.5960.000261
ORF1ab/nsp12246T246TacCacA14B.1.5960.000087
ORF1ab/nsp12246T246TacCacT44B.1.6090.001918
ORF1ab/nsp12246T246TacCacT44C.260.029412
ORF1ab/nsp12246T246IaCcaTc44C.36.30.002269
ORF1ab/nsp12246T246TacCacT34C.370.000348
ORF1ab/nsp12246T246TacCacA14C.370.000116
ORF1ab/nsp12246T246TacCacT44D.20.0003
ORF1ab/nsp12246T246TacCacT44Q.30.00058
ORF1ab/nsp12246T246TacCacT33A.2.50.001497
ORF1ab/nsp12246T246IaCcaTc33A.2.50.001497
ORF1ab/nsp12246T246PAccCcc33All0.000001
ORF1ab/nsp12246T246IaCcaTc33AY.1180.000188
ORF1ab/nsp12246T246TacCacT33AY.160.001139
ORF1ab/nsp12246T246TacCacT33AY.34.10.00153
ORF1ab/nsp12246T246IaCcaTc33AY.4.20.000065
ORF1ab/nsp12246T246TacCacT33AY.4.50.000322
ORF1ab/nsp12246T246TacCacT33AY.660.003209
ORF1ab/nsp12246T246TacCacT33AY.7.10.000338
ORF1ab/nsp12246T246IaCcaTc33AY.880.002653
ORF1ab/nsp12246T246TacCacT33AY.90.000203
ORF1ab/nsp12246T246TacCacT33AY.950.002283
ORF1ab/nsp12246T246TacCacT33AY.990.003148
ORF1ab/nsp12246T246IaCcaTc33B0.000383
ORF1ab/nsp12246T246TacCacT33B.1.1.1640.015464
ORF1ab/nsp12246T246TacCacT33B.1.1.2250.021583
ORF1ab/nsp12246T246TacCacT33B.1.1.2840.000322
ORF1ab/nsp12246T246IaCcaTc33B.1.1.3480.002389
ORF1ab/nsp12246T246IaCcaTc33B.1.1.4410.15
ORF1ab/nsp12246T246IaCcaTc23B.1.1.5190.000079
ORF1ab/nsp12246T246IaCCaTT13B.1.1.5190.00004
ORF1ab/nsp12246T246NaCCaAT33B.1.1.630.001157
ORF1ab/nsp12246T246TacCacT33B.1.1390.002199
ORF1ab/nsp12246T246TacCacT33B.1.1950.015075
ORF1ab/nsp12246T246TacCacT33B.1.3110.000824
ORF1ab/nsp12246T246IaCcaTc33B.1.351.20.000908
ORF1ab/nsp12246T246IaCcaTc33B.1.3690.000856
ORF1ab/nsp12246T246IaCcaTc33B.1.5610.001191
ORF1ab/nsp12246T246IaCcaTc33B.1.5820.001472
ORF1ab/nsp12246T246TacCacT33B.1.5950.000783
ORF1ab/nsp12246T246IaCcaTc33B.6.60.002667
ORF1ab/nsp12246T246TacCacT33P.1.20.003468
ORF1ab/nsp12246T246TacCacT33P.20.00056
ORF1ab/nsp12246T246TacCacT33P.50.041096
ORF1ab/nsp12246T246AAcCGcT120.055556
ORF1ab/nsp12246T246NaCCaAT120.055556
ORF1ab/nsp12246T246AAccGcc120.055556
ORF1ab/nsp12246T246TacCacT120.055556
ORF1ab/nsp12246T246TacCacA120.055556
ORF1ab/nsp12246T246DACcGAc120.055556
ORF1ab/nsp12246T246NaCcaAc120.055556
ORF1ab/nsp12246T246DACCGAT120.055556
ORF1ab/nsp12246T246TacCacT22A.190.018868
ORF1ab/nsp12246T246DACcGAc12All0
ORF1ab/nsp12246T246DACCGAT12All0
ORF1ab/nsp12246T246TacCacT22AY.1060.00067
ORF1ab/nsp12246T246TacCacT22AY.1080.002205
ORF1ab/nsp12246T246TacCacT22AY.1140.000462
ORF1ab/nsp12246T246IaCcaTc22AY.1170.000169
ORF1ab/nsp12246T246TacCacT22AY.1180.000125
ORF1ab/nsp12246T246IaCcaTc22AY.200.000078
ORF1ab/nsp12246T246TacCacT22AY.270.000129
ORF1ab/nsp12246T246IaCcaTc22AY.340.000194
ORF1ab/nsp12246T246TacCacT22AY.350.000466
ORF1ab/nsp12246T246TacCacT22AY.370.000632
ORF1ab/nsp12246T246IaCcaTc22AY.4.2.10.000298
ORF1ab/nsp12246T246IaCcaTc22AY.410.000588
ORF1ab/nsp12246T246NaCcaAc22AY.440.000012
ORF1ab/nsp12246T246TacCacT22AY.450.000243
ORF1ab/nsp12246T246IaCcaTc22AY.460.000208
ORF1ab/nsp12246T246TacCacT22AY.520.001629
ORF1ab/nsp12246T246TacCacT22AY.530.000575
ORF1ab/nsp12246T246TacCacT22AY.620.000871
ORF1ab/nsp12246T246TacCacT22AY.630.000774
ORF1ab/nsp12246T246TacCacT22AY.760.009662
ORF1ab/nsp12246T246TacCacT22AY.820.002714
ORF1ab/nsp12246T246IaCcaTc22AY.980.000158
ORF1ab/nsp12246T246NaCcaAc22B.1.10.000036
ORF1ab/nsp12246T246TacCacT22B.1.1.2070.002364
ORF1ab/nsp12246T246TacCacT22B.1.1.2770.001517
ORF1ab/nsp12246T246TacCacT22B.1.1.2940.002532
ORF1ab/nsp12246T246IaCcaTc22B.1.1.2980.001724
ORF1ab/nsp12246T246TacCacT22B.1.1.3060.000877
ORF1ab/nsp12246T246TacCacT22B.1.1.3110.000716
ORF1ab/nsp12246T246TacCacT22B.1.1.3690.000892
ORF1ab/nsp12246T246TacCacT22B.1.1.530.027397
ORF1ab/nsp12246T246TacCacT12B.1.177.120.000152
ORF1ab/nsp12246T246TacCacA12B.1.177.120.000152
ORF1ab/nsp12246T246IaCcaTc22B.1.177.20.009091
ORF1ab/nsp12246T246TacCacT22B.1.177.210.000153
ORF1ab/nsp12246T246TacCacT22B.1.177.440.001038
ORF1ab/nsp12246T246TacCacT22B.1.177.600.000437
ORF1ab/nsp12246T246TacCacT22B.1.177.690.002967
ORF1ab/nsp12246T246TacCacT22B.1.177.80.001505
ORF1ab/nsp12246T246TacCacT22B.1.177.90.002663
ORF1ab/nsp12246T246delACC---22B.1.20.000018
ORF1ab/nsp12246T246TacCacT22B.1.2100.004264
ORF1ab/nsp12246T246TacCacT22B.1.2340.000264
ORF1ab/nsp12246T246IaCcaTc22B.1.2400.000431
ORF1ab/nsp12246T246TacCacT22B.1.2790.001027
ORF1ab/nsp12246T246TacCacT22B.1.2800.014286
ORF1ab/nsp12246T246IaCcaTc22B.1.3110.000549
ORF1ab/nsp12246T246TacCacT22B.1.3490.00143
ORF1ab/nsp12246T246TacCacT22B.1.351.30.001753
ORF1ab/nsp12246T246IaCcaTc22B.1.36.180.00084
ORF1ab/nsp12246T246TacCacT22B.1.3960.001411
ORF1ab/nsp12246T246TacCacA12B.1.5760.000907
ORF1ab/nsp12246T246TacCacT12B.1.5760.000907
ORF1ab/nsp12246T246IaCcaTc22B.1.5970.009259
ORF1ab/nsp12246T246TacCacT22B.1.930.001867
ORF1ab/nsp12246T246IaCcaTc22C.300.003454
ORF1ab/nsp12246T246TacCacT12P.1.100.000269
ORF1ab/nsp12246T246TacCacG12P.1.100.000269
ORF1ab/nsp12246T246TacCacT22P.1.120.000968
ORF1ab/nsp12246T246TacCacT22P.1.150.000465
ORF1ab/nsp12246T246TacCacT22Q.10.000253
ORF1ab/nsp12246T246TacCacT11A.20.000662
ORF1ab/nsp12246T246IaCcaTc11A.20.000662
ORF1ab/nsp12246T246IaCcaTc11A.2.40.003367
ORF1ab/nsp12246T246TacCacA11A.23.10.000704
ORF1ab/nsp12246T246TacCacT11AD.20.000219
ORF1ab/nsp12246T246TacCacT11AG.10.066667
ORF1ab/nsp12246T246del2ACc--c11All0
ORF1ab/nsp12246T246del1aCca-c11All0
ORF1ab/nsp12246T246TacCacA11AW.10.003049
ORF1ab/nsp12246T246TacCacT11AY.1070.000466
ORF1ab/nsp12246T246TacCacT11AY.1100.000113
ORF1ab/nsp12246T246IaCcaTc11AY.1100.000113
ORF1ab/nsp12246T246IaCcaTc11AY.1130.000142
ORF1ab/nsp12246T246IaCcaTc11AY.1160.000287
ORF1ab/nsp12246T246delACC---11AY.1180.000063
ORF1ab/nsp12246T246delACC---11AY.1200.000037
ORF1ab/nsp12246T246TacCacT11AY.120.20.001285
ORF1ab/nsp12246T246IaCcaTc11AY.130.000161
ORF1ab/nsp12246T246TacCacT11AY.130.000161
ORF1ab/nsp12246T246IaCcaTc11AY.140.000088
ORF1ab/nsp12246T246TacCacT11AY.140.000088
ORF1ab/nsp12246T246IaCcaTc11AY.160.00038
ORF1ab/nsp12246T246TacCacG11AY.20.000356
ORF1ab/nsp12246T246IaCcaTc11AY.230.00007
ORF1ab/nsp12246T246TacCacT11AY.23.10.000417
ORF1ab/nsp12246T246IaCcaTc11AY.23.10.000417
ORF1ab/nsp12246T246delACC---11AY.250.000006
ORF1ab/nsp12246T246IaCcaTc11AY.270.000065
ORF1ab/nsp12246T246IaCcaTc11AY.280.00189
ORF1ab/nsp12246T246IaCcaTc11AY.300.000396
ORF1ab/nsp12246T246TacCacT11AY.300.000396
ORF1ab/nsp12246T246TacCacT11AY.360.000148
ORF1ab/nsp12246T246TacCacT11AY.380.000499
ORF1ab/nsp12246T246delACC---11AY.390.000025
ORF1ab/nsp12246T246IaCcaTc11AY.39.10.00004
ORF1ab/nsp12246T246TacCacT11AY.39.1.10.000725
ORF1ab/nsp12246T246AAccGcc11AY.40.000002
ORF1ab/nsp12246T246SaCcaGc11AY.40.000002
ORF1ab/nsp12246T246NaCcaAc11AY.40.000002
ORF1ab/nsp12246T246TacCacT11AY.4.2.10.000149
ORF1ab/nsp12246T246TacCacT11AY.4.30.000842
ORF1ab/nsp12246T246del2ACc--c11AY.440.000006
ORF1ab/nsp12246T246TacCacT11AY.46.10.001027
ORF1ab/nsp12246T246TacCacT11AY.46.20.000635
ORF1ab/nsp12246T246TacCacT11AY.540.000095
ORF1ab/nsp12246T246IaCcaTc11AY.620.000436
ORF1ab/nsp12246T246TacCacT11AY.650.000533
ORF1ab/nsp12246T246delACC---11AY.650.000533
ORF1ab/nsp12246T246TacCacT11AY.680.000274
ORF1ab/nsp12246T246IaCcaTc11AY.680.000274
ORF1ab/nsp12246T246IaCcaTc11AY.7.10.000113
ORF1ab/nsp12246T246IaCcaTc11AY.750.000056
ORF1ab/nsp12246T246delACC---11AY.80.000606
ORF1ab/nsp12246T246IaCcaTc11AY.840.000437
ORF1ab/nsp12246T246TacCacT11AY.850.000427
ORF1ab/nsp12246T246TacCacT11AY.9.10.000084
ORF1ab/nsp12246T246IaCcaTc11AY.9.10.000084
ORF1ab/nsp12246T246AAccGcc11AY.9.20.000037
ORF1ab/nsp12246T246IaCcaTc11AY.920.000287
ORF1ab/nsp12246T246IaCcaTc11AY.99.20.000092
ORF1ab/nsp12246T246TacCacA11AZ.50.003509
ORF1ab/nsp12246T246NaCcaAc11B.10.000009
ORF1ab/nsp12246T246PAccCcc11B.10.000009
ORF1ab/nsp12246T246AAccGcc11B.1.10.000018
ORF1ab/nsp12246T246delACC---11B.1.10.000018
ORF1ab/nsp12246T246SAccTcc11B.1.10.000018
ORF1ab/nsp12246T246delACC---11B.1.1.10.000327
ORF1ab/nsp12246T246TacCacT11B.1.1.1010.01
ORF1ab/nsp12246T246TacCacT11B.1.1.1350.004695
ORF1ab/nsp12246T246TacCacT11B.1.1.1610.003534
ORF1ab/nsp12246T246TacCacT11B.1.1.2050.003717
ORF1ab/nsp12246T246IaCcaTc11B.1.1.2070.001182
ORF1ab/nsp12246T246TacCacA11B.1.1.2100.005714
ORF1ab/nsp12246T246TacCacT11B.1.1.2190.005
ORF1ab/nsp12246T246IaCcaTc11B.1.1.2220.000204
ORF1ab/nsp12246T246TacCacT11B.1.1.2310.003096
ORF1ab/nsp12246T246TacCacT11B.1.1.2410.00207
ORF1ab/nsp12246T246IaCcaTc11B.1.1.2550.00303
ORF1ab/nsp12246T246TacCacT11B.1.1.2580.003257
ORF1ab/nsp12246T246TacCacT11B.1.1.2790.001121
ORF1ab/nsp12246T246IaCcaTc11B.1.1.2800.003086
ORF1ab/nsp12246T246NaCcaAc11B.1.1.2840.000107
ORF1ab/nsp12246T246TacCacT11B.1.1.2860.002899
ORF1ab/nsp12246T246TacCacT11B.1.1.3070.002532
ORF1ab/nsp12246T246IaCcaTc11B.1.1.3070.002532
ORF1ab/nsp12246T246TacCacT11B.1.1.310.066667
ORF1ab/nsp12246T246IaCcaTc11B.1.1.3110.000358
ORF1ab/nsp12246T246IaCcaTc11B.1.1.3180.000302
ORF1ab/nsp12246T246TacCacT11B.1.1.3260.001761
ORF1ab/nsp12246T246TacCacT11B.1.1.330.000421
ORF1ab/nsp12246T246IaCcaTc11B.1.1.3440.010753
ORF1ab/nsp12246T246TacCacT11B.1.1.3480.000796
ORF1ab/nsp12246T246TacCacA11B.1.1.3710.010417
ORF1ab/nsp12246T246IaCcaTc11B.1.1.3780.007299
ORF1ab/nsp12246T246IaCcaTc11B.1.1.390.00051
ORF1ab/nsp12246T246TacCacT11B.1.1.4200.001006
ORF1ab/nsp12246T246IaCcaTc11B.1.1.4650.015625
ORF1ab/nsp12246T246IaCcaTc11B.1.1.50.008333
ORF1ab/nsp12246T246TacCacT11B.1.1.500.000679
ORF1ab/nsp12246T246AAccGcc11B.1.1.70.000001
ORF1ab/nsp12246T246PAccCcc11B.1.1.70.000001
ORF1ab/nsp12246T246NaCcaAc11B.1.1.70.000001
ORF1ab/nsp12246T246SAccTcc11B.1.1.70.000001
ORF1ab/nsp12246T246IaCcaTc11B.1.1.700.000341
ORF1ab/nsp12246T246TacCacT11B.1.1260.001276
ORF1ab/nsp12246T246IaCcaTc11B.1.1470.000756
ORF1ab/nsp12246T246IaCcaTc11B.1.1600.000031
ORF1ab/nsp12246T246TacCacT11B.1.160.180.007299
ORF1ab/nsp12246T246TacCacT11B.1.160.250.011111
ORF1ab/nsp12246T246SAccTcc11B.1.1770.000013
ORF1ab/nsp12246T246TacCacT11B.1.177.150.000631
ORF1ab/nsp12246T246AAccGcc11B.1.177.180.00116
ORF1ab/nsp12246T246TacCacT11B.1.177.330.001645
ORF1ab/nsp12246T246TacCacT11B.1.177.350.000691
ORF1ab/nsp12246T246TacCacT11B.1.177.380.010417
ORF1ab/nsp12246T246TacCacT11B.1.177.40.000211
ORF1ab/nsp12246T246IaCcaTc11B.1.177.40.000211
ORF1ab/nsp12246T246IaCcaTc11B.1.177.450.000381
ORF1ab/nsp12246T246TacCacT11B.1.177.50.001242
ORF1ab/nsp12246T246TacCacT11B.1.177.60.000977
ORF1ab/nsp12246T246TacCacT11B.1.177.720.00339
ORF1ab/nsp12246T246TacCacT11B.1.177.730.000566
ORF1ab/nsp12246T246IaCcaTc11B.1.177.750.001041
ORF1ab/nsp12246T246PAccCcc11B.1.20.000009
ORF1ab/nsp12246T246TacCacT11B.1.2120.016667
ORF1ab/nsp12246T246TacCacT11B.1.2140.003663
ORF1ab/nsp12246T246IaCcaTc11B.1.2210.000071
ORF1ab/nsp12246T246TacCacT11B.1.230.006061
ORF1ab/nsp12246T246TacCacT11B.1.2400.000216
ORF1ab/nsp12246T246TacCacT11B.1.243.20.014493
ORF1ab/nsp12246T246IaCcaTc11B.1.2520.006623
ORF1ab/nsp12246T246IaCcaTc11B.1.2580.000067
ORF1ab/nsp12246T246TacCacT11B.1.3010.005917
ORF1ab/nsp12246T246TacCacT11B.1.3050.002151
ORF1ab/nsp12246T246IaCcaTc11B.1.3360.002439
ORF1ab/nsp12246T246IaCcaTc11B.1.3510.00003
ORF1ab/nsp12246T246IaCcaTc11B.1.36.10.00114
ORF1ab/nsp12246T246TacCacT11B.1.36.100.004785
ORF1ab/nsp12246T246IaCcaTc11B.1.36.100.004785
ORF1ab/nsp12246T246TacCacT11B.1.36.190.009259
ORF1ab/nsp12246T246IaCcaTc11B.1.36.310.001751
ORF1ab/nsp12246T246TacCacT11B.1.36.310.001751
ORF1ab/nsp12246T246TacCacT11B.1.36.390.002217
ORF1ab/nsp12246T246TacCacT11B.1.36.80.001
ORF1ab/nsp12246T246IaCcaTc11B.1.3750.00082
ORF1ab/nsp12246T246TacCacT11B.1.3750.00082
ORF1ab/nsp12246T246TacCacT11B.1.3890.001002
ORF1ab/nsp12246T246TacCacT11B.1.390.003906
ORF1ab/nsp12246T246IaCcaTc11B.1.4000.000429
ORF1ab/nsp12246T246TacCacT11B.1.4000.000429
ORF1ab/nsp12246T246TacCacT11B.1.4020.009804
ORF1ab/nsp12246T246IaCcaTc11B.1.4040.001302
ORF1ab/nsp12246T246TacCacT11B.1.4090.000781
ORF1ab/nsp12246T246IaCcaTc11B.1.4160.001269
ORF1ab/nsp12246T246TacCacT11B.1.4170.028571
ORF1ab/nsp12246T246TacCacT11B.1.4860.111111
ORF1ab/nsp12246T246TacCacT11B.1.4970.000315
ORF1ab/nsp12246T246IaCcaTc11B.1.5250.000113
ORF1ab/nsp12246T246delACC---11B.1.5250.000113
ORF1ab/nsp12246T246TacCacT11B.1.5440.006024
ORF1ab/nsp12246T246TacCacT11B.1.5460.003704
ORF1ab/nsp12246T246TacCacT11B.1.5510.00129
ORF1ab/nsp12246T246TacCacT11B.1.5580.004566
ORF1ab/nsp12246T246TacCacT11B.1.5640.000426
ORF1ab/nsp12246T246TacCacT11B.1.5740.002151
ORF1ab/nsp12246T246TacCacT11B.1.5770.000687
ORF1ab/nsp12246T246IaCcaTc11B.1.5810.009434
ORF1ab/nsp12246T246TacCacT11B.1.5990.00365
ORF1ab/nsp12246T246IaCcaTc11B.1.6090.000479
ORF1ab/nsp12246T246IaCcaTc11B.1.617.10.000129
ORF1ab/nsp12246T246TacCacT11B.1.617.30.002985
ORF1ab/nsp12246T246IaCcaTc11B.1.6200.000946
ORF1ab/nsp12246T246TacCacT11B.1.6200.000946
ORF1ab/nsp12246T246AAccGcc11B.1.621.10.000506
ORF1ab/nsp12246T246TacCacT11B.1.6230.000536
ORF1ab/nsp12246T246TacCacT11B.1.6270.00202
ORF1ab/nsp12246T246IaCcaTc11B.1.6270.00202
ORF1ab/nsp12246T246TacCacA11B.1.9.50.005682
ORF1ab/nsp12246T246TacCacT11B.190.037037
ORF1ab/nsp12246T246TacCacT11B.40.002208
ORF1ab/nsp12246T246TacCacT11C.140.004329
ORF1ab/nsp12246T246TacCacT11C.160.00106
ORF1ab/nsp12246T246TacCacA11C.180.002591
ORF1ab/nsp12246T246IaCcaTc11D.20.000075
ORF1ab/nsp12246T246TacCacT11N.40.004255
ORF1ab/nsp12246T246TacCacT11P.1.10.000318
ORF1ab/nsp12246T246del1aCca-c11P.1.10.000318
ORF1ab/nsp12246T246IaCcaTc11P.1.100.000269
ORF1ab/nsp12246T246IaCcaTc11P.1.150.000232
ORF1ab/nsp12246T246TacCacT11P.1.170.000162
ORF1ab/nsp12246T246TacCacA11P.1.40.000977
ORF1ab/nsp12246T246TacCacT11P.1.90.004808
ORF1ab/nsp12246T246TacCacT11P.40.003802
ORF1ab/nsp12246T246TacCacT11P.70.004367
ORF1ab/nsp12246T246TacCacA11W.40.001351