CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 197 & Codon = cTa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12197R197LR4589LnonsyncGacTa9292114029-14031

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12197R197LcGacTa9292All0.000018
ORF1ab/nsp12197R197LcGacTa2222AY.40.000034
ORF1ab/nsp12197R197LcGacTa1717B.10.000156
ORF1ab/nsp12197R197LcGacTa1111B.1.617.20.000041
ORF1ab/nsp12197R197LcGacTa55AY.1030.000031
ORF1ab/nsp12197R197LcGacTa55B.1.1.70.000004
ORF1ab/nsp12197R197LcGacTa44AY.330.000267
ORF1ab/nsp12197R197LcGacTa44AY.440.000024
ORF1ab/nsp12197R197LcGacTa44B.1.360.000584
ORF1ab/nsp12197R197LcGacTa33AY.250.000018
ORF1ab/nsp12197R197LcGacTa22P.1.170.000324
ORF1ab/nsp12197R197LcGacTa11A0.000387
ORF1ab/nsp12197R197LcGacTa11AY.230.00007
ORF1ab/nsp12197R197LcGacTa11AY.290.000016
ORF1ab/nsp12197R197LcGacTa11AY.360.000148
ORF1ab/nsp12197R197LcGacTa11AY.390.000025
ORF1ab/nsp12197R197LcGacTa11AY.410.000294
ORF1ab/nsp12197R197LcGacTa11AY.430.000004
ORF1ab/nsp12197R197LcGacTa11AY.50.000021
ORF1ab/nsp12197R197LcGacTa11AY.610.000105
ORF1ab/nsp12197R197LcGacTa11AY.99.10.001553
ORF1ab/nsp12197R197LcGacTa11B.1.1600.000031
ORF1ab/nsp12197R197LcGacTa11B.1.1770.000013
ORF1ab/nsp12197R197LcGacTa11B.1.177.170.000821
ORF1ab/nsp12197R197LcGacTa11B.1.20.000009
ORF1ab/nsp12197R197LcGacTa11P.1.150.000232