CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 174

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12174V174IV4566InonsynGtaAta20542054113960-13962
ORF1ab/nsp12174V174VV4566VsyngtAgtG205420420.99415813960-13962
ORF1ab/nsp12174V174VV4566VsyngtAgtT205470.0034079813960-13962
ORF1ab/nsp12174V174VV4566VsyngtAgtC205450.0024342713960-13962
ORF1ab/nsp12174V174AV4566AnonsyngTagCa4141113960-13962
ORF1ab/nsp12174V174LV4566LnonsynGtaTta22200.90909113960-13962
ORF1ab/nsp12174V174LV4566LnonsynGtaCta2220.090909113960-13962
ORF1ab/nsp12174V174delV4566deldelGTA---1616113960-13962
ORF1ab/nsp12174V174del1V4566del1delgtAgt-12110.91666713960-13962
ORF1ab/nsp12174V174del1V4566del1delGta-ta1210.083333313960-13962
ORF1ab/nsp12174V174del2V4566del2delgTAg--430.7513960-13962
ORF1ab/nsp12174V174del2V4566del2delGTa--a410.2513960-13962
ORF1ab/nsp12174V174GV4566GnonsyngTagGa22113960-13962

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12174V174IGtaAta20542054All0.000393
ORF1ab/nsp12174V174VgtAgtG20422054All0.000391
ORF1ab/nsp12174V174VgtAgtT72054All0.000001
ORF1ab/nsp12174V174VgtAgtC52054All0.000001
ORF1ab/nsp12174V174VgtAgtG10951095AY.750.061345
ORF1ab/nsp12174V174IGtaAta518518B.1.4290.012188
ORF1ab/nsp12174V174IGtaAta464464B.1.617.20.001747
ORF1ab/nsp12174V174VgtAgtG303303AY.9.20.011129
ORF1ab/nsp12174V174IGtaAta203203AY.610.02127
ORF1ab/nsp12174V174VgtAgtG169170B.1.1.70.000151
ORF1ab/nsp12174V174VgtAgtT1170B.1.1.70.000001
ORF1ab/nsp12174V174VgtAgtG116118AY.40.000181
ORF1ab/nsp12174V174VgtAgtT1118AY.40.000002
ORF1ab/nsp12174V174VgtAgtC1118AY.40.000002
ORF1ab/nsp12174V174IGtaAta8888B.1.1.70.000079
ORF1ab/nsp12174V174IGtaAta8080B.10.000733
ORF1ab/nsp12174V174IGtaAta7878AY.40.000121
ORF1ab/nsp12174V174IGtaAta6464AY.60.002632
ORF1ab/nsp12174V174IGtaAta6363AY.75.10.01136
ORF1ab/nsp12174V174VgtAgtG6161AY.1030.000379
ORF1ab/nsp12174V174VgtAgtG6060B.1.1.2240.857143
ORF1ab/nsp12174V174AgTagCa4141All0.000008
ORF1ab/nsp12174V174IGtaAta3434AY.200.001321
ORF1ab/nsp12174V174IGtaAta3030B.1.2430.002088
ORF1ab/nsp12174V174IGtaAta2828AY.250.000168
ORF1ab/nsp12174V174IGtaAta2424B.1.5090.020779
ORF1ab/nsp12174V174IGtaAta2323AY.1130.003275
ORF1ab/nsp12174V174VgtAgtG2223B.1.617.20.000083
ORF1ab/nsp12174V174VgtAgtC123B.1.617.20.000004
ORF1ab/nsp12174V174LGtaTta2022All0.000004
ORF1ab/nsp12174V174LGtaCta222All0
ORF1ab/nsp12174V174IGtaAta2222AY.1180.001378
ORF1ab/nsp12174V174IGtaAta1818AY.440.00011
ORF1ab/nsp12174V174VgtAgtG1717AY.4.20.000369
ORF1ab/nsp12174V174delGTA---1616All0.000003
ORF1ab/nsp12174V174VgtAgtG1515AY.50.00031
ORF1ab/nsp12174V174IGtaAta1414AY.710.006651
ORF1ab/nsp12174V174VgtAgtG1414B.1.258.170.001456
ORF1ab/nsp12174V174IGtaAta1313AY.16.10.006109
ORF1ab/nsp12174V174del1gtAgt-1112All0.000002
ORF1ab/nsp12174V174del1Gta-ta112All0
ORF1ab/nsp12174V174IGtaAta1212AY.1160.003441
ORF1ab/nsp12174V174IGtaAta1212AY.430.000053
ORF1ab/nsp12174V174IGtaAta1111AY.1030.000068
ORF1ab/nsp12174V174VgtAgtG1011AY.250.00006
ORF1ab/nsp12174V174VgtAgtC111AY.250.000006
ORF1ab/nsp12174V174IGtaAta1111AY.30.000109
ORF1ab/nsp12174V174IGtaAta1111AY.390.000272
ORF1ab/nsp12174V174IGtaAta1111B.1.20.000097
ORF1ab/nsp12174V174VgtAgtG1010AY.540.000953
ORF1ab/nsp12174V174VgtAgtG1010B.1.1770.000132
ORF1ab/nsp12174V174IGtaAta1010B.1.3690.002852
ORF1ab/nsp12174V174VgtAgtG99AY.440.000055
ORF1ab/nsp12174V174VgtAgtG78B.1.5250.000792
ORF1ab/nsp12174V174VgtAgtT18B.1.5250.000113
ORF1ab/nsp12174V174IGtaAta88B.1.5260.000188
ORF1ab/nsp12174V174IGtaAta88P.10.000126
ORF1ab/nsp12174V174IGtaAta77AY.1020.000186
ORF1ab/nsp12174V174AgTagCa77B.1.1.2980.006034
ORF1ab/nsp12174V174VgtAgtG77B.1.20.000062
ORF1ab/nsp12174V174IGtaAta66AY.1110.001099
ORF1ab/nsp12174V174IGtaAta66AY.130.000966
ORF1ab/nsp12174V174VgtAgtG66AY.390.000148
ORF1ab/nsp12174V174IGtaAta66AY.470.000187
ORF1ab/nsp12174V174IGtaAta66AY.700.001251
ORF1ab/nsp12174V174IGtaAta66AY.970.010204
ORF1ab/nsp12174V174VgtAgtG66B.10.000055
ORF1ab/nsp12174V174del1gtAgt-66B.1.1.3690.002677
ORF1ab/nsp12174V174AgTagCa66B.1.1.70.000005
ORF1ab/nsp12174V174IGtaAta66B.1.5170.002562
ORF1ab/nsp12174V174IGtaAta66B.1.5960.000523
ORF1ab/nsp12174V174VgtAgtG55A0.001935
ORF1ab/nsp12174V174IGtaAta55AY.1100.000563
ORF1ab/nsp12174V174IGtaAta55AY.1190.000177
ORF1ab/nsp12174V174IGtaAta55AY.140.00044
ORF1ab/nsp12174V174IGtaAta55AY.750.00028
ORF1ab/nsp12174V174IGtaAta55AY.9.20.000184
ORF1ab/nsp12174V174IGtaAta55AY.980.000395
ORF1ab/nsp12174V174IGtaAta55B0.000639
ORF1ab/nsp12174V174VgtAgtG55B.1.177.600.001092
ORF1ab/nsp12174V174IGtaAta55B.1.6370.000365
ORF1ab/nsp12174V174del2gTAg--34All0.000001
ORF1ab/nsp12174V174del2GTa--a14All0
ORF1ab/nsp12174V174VgtAgtG44AY.1130.00057
ORF1ab/nsp12174V174VgtAgtG44AY.200.000155
ORF1ab/nsp12174V174IGtaAta44AY.260.000113
ORF1ab/nsp12174V174VgtAgtG44AY.290.000063
ORF1ab/nsp12174V174IGtaAta44AY.39.10.000158
ORF1ab/nsp12174V174IGtaAta44AY.420.000161
ORF1ab/nsp12174V174IGtaAta44AY.460.000416
ORF1ab/nsp12174V174IGtaAta44AY.670.001857
ORF1ab/nsp12174V174AgTagCa44B.1.10.000073
ORF1ab/nsp12174V174delGTA---44B.1.1.70.000004
ORF1ab/nsp12174V174IGtaAta44B.1.3510.000119
ORF1ab/nsp12174V174VgtAgtG44B.1.5680.004444
ORF1ab/nsp12174V174AgTagCa44B.1.617.20.000015
ORF1ab/nsp12174V174IGtaAta33AD.20.000657
ORF1ab/nsp12174V174IGtaAta33AY.1000.000138
ORF1ab/nsp12174V174VgtAgtG33AY.1180.000188
ORF1ab/nsp12174V174IGtaAta33AY.160.001139
ORF1ab/nsp12174V174IGtaAta33AY.230.000209
ORF1ab/nsp12174V174VgtAgtG33AY.30.00003
ORF1ab/nsp12174V174IGtaAta33AY.330.0002
ORF1ab/nsp12174V174LGtaTta33AY.390.000074
ORF1ab/nsp12174V174VgtAgtG23AY.430.000009
ORF1ab/nsp12174V174VgtAgtT13AY.430.000004
ORF1ab/nsp12174V174IGtaAta33AY.650.001599
ORF1ab/nsp12174V174VgtAgtG23AY.75.10.000361
ORF1ab/nsp12174V174VgtAgtC13AY.75.10.00018
ORF1ab/nsp12174V174IGtaAta33AY.98.10.000145
ORF1ab/nsp12174V174VgtAgtG23B.1.10.000036
ORF1ab/nsp12174V174VgtAgtT13B.1.10.000018
ORF1ab/nsp12174V174LGtaTta23B.1.1.70.000002
ORF1ab/nsp12174V174LGtaCta13B.1.1.70.000001
ORF1ab/nsp12174V174AgTagCa33B.1.20.000026
ORF1ab/nsp12174V174VgtAgtG33B.1.2210.000213
ORF1ab/nsp12174V174IGtaAta33B.1.2580.0002
ORF1ab/nsp12174V174LGtaTta33B.1.258.170.000312
ORF1ab/nsp12174V174VgtAgtG33B.1.5880.00273
ORF1ab/nsp12174V174LGtaTta33B.1.617.20.000011
ORF1ab/nsp12174V174GgTagGa22All0
ORF1ab/nsp12174V174VgtAgtG22AY.1170.000169
ORF1ab/nsp12174V174VgtAgtG22AY.1200.000074
ORF1ab/nsp12174V174IGtaAta22AY.1200.000074
ORF1ab/nsp12174V174VgtAgtG22AY.140.000176
ORF1ab/nsp12174V174VgtAgtG22AY.260.000057
ORF1ab/nsp12174V174IGtaAta22AY.290.000032
ORF1ab/nsp12174V174VgtAgtG22AY.300.000791
ORF1ab/nsp12174V174AgTagCa22AY.40.000003
ORF1ab/nsp12174V174IGtaAta22AY.50.000041
ORF1ab/nsp12174V174IGtaAta22AY.520.001629
ORF1ab/nsp12174V174IGtaAta22AY.600.001876
ORF1ab/nsp12174V174IGtaAta22AY.620.000871
ORF1ab/nsp12174V174VgtAgtG22AY.620.000871
ORF1ab/nsp12174V174VgtAgtG22AY.850.000854
ORF1ab/nsp12174V174VgtAgtG22AY.980.000158
ORF1ab/nsp12174V174LGtaTta22B.10.000018
ORF1ab/nsp12174V174VgtAgtG22B.1.1.2140.000111
ORF1ab/nsp12174V174VgtAgtG22B.1.1.2840.000215
ORF1ab/nsp12174V174IGtaAta22B.1.1.3480.001592
ORF1ab/nsp12174V174del2gTAg--22B.1.1.70.000002
ORF1ab/nsp12174V174VgtAgtG22B.1.177.100.001756
ORF1ab/nsp12174V174VgtAgtT22B.1.177.450.000762
ORF1ab/nsp12174V174VgtAgtG22B.1.3510.000059
ORF1ab/nsp12174V174VgtAgtG22B.1.360.000292
ORF1ab/nsp12174V174VgtAgtG22B.1.36.290.001035
ORF1ab/nsp12174V174IGtaAta22B.1.617.10.000258
ORF1ab/nsp12174V174IGtaAta22B.1.6210.000177
ORF1ab/nsp12174V174VgtAgtG22D.20.00015
ORF1ab/nsp12174V174AgTagCa22P.10.000032
ORF1ab/nsp12174V174VgtAgtG22P.10.000032
ORF1ab/nsp12174V174delGTA---22Q.10.000253
ORF1ab/nsp12174V174IGtaAta11A0.000387
ORF1ab/nsp12174V174IGtaAta11A.2.40.003367
ORF1ab/nsp12174V174IGtaAta11AU.20.002421
ORF1ab/nsp12174V174VgtAgtG11AY.1000.000046
ORF1ab/nsp12174V174VgtAgtG11AY.1010.00049
ORF1ab/nsp12174V174VgtAgtG11AY.1020.000027
ORF1ab/nsp12174V174AgTagCa11AY.1100.000113
ORF1ab/nsp12174V174IGtaAta11AY.1170.000085
ORF1ab/nsp12174V174VgtAgtG11AY.1190.000035
ORF1ab/nsp12174V174VgtAgtG11AY.120.000316
ORF1ab/nsp12174V174VgtAgtG11AY.1210.000135
ORF1ab/nsp12174V174LGtaTta11AY.140.000088
ORF1ab/nsp12174V174IGtaAta11AY.190.00114
ORF1ab/nsp12174V174VgtAgtG11AY.240.000431
ORF1ab/nsp12174V174LGtaTta11AY.250.000006
ORF1ab/nsp12174V174AgTagCa11AY.250.000006
ORF1ab/nsp12174V174LGtaTta11AY.260.000028
ORF1ab/nsp12174V174IGtaAta11AY.270.000065
ORF1ab/nsp12174V174IGtaAta11AY.29.10.000221
ORF1ab/nsp12174V174IGtaAta11AY.300.000396
ORF1ab/nsp12174V174IGtaAta11AY.340.000097
ORF1ab/nsp12174V174IGtaAta11AY.34.10.00051
ORF1ab/nsp12174V174VgtAgtC11AY.350.000233
ORF1ab/nsp12174V174IGtaAta11AY.350.000233
ORF1ab/nsp12174V174IGtaAta11AY.360.000148
ORF1ab/nsp12174V174IGtaAta11AY.370.000316
ORF1ab/nsp12174V174IGtaAta11AY.4.20.000022
ORF1ab/nsp12174V174AgTagCa11AY.420.00004
ORF1ab/nsp12174V174del1gtAgt-11AY.430.000004
ORF1ab/nsp12174V174LGtaTta11AY.440.000006
ORF1ab/nsp12174V174del2GTa--a11AY.440.000006
ORF1ab/nsp12174V174AgTagCa11AY.440.000006
ORF1ab/nsp12174V174IGtaAta11AY.46.50.000198
ORF1ab/nsp12174V174VgtAgtG11AY.470.000031
ORF1ab/nsp12174V174VgtAgtG11AY.5.40.000277
ORF1ab/nsp12174V174IGtaAta11AY.530.000288
ORF1ab/nsp12174V174AgTagCa11AY.540.000095
ORF1ab/nsp12174V174VgtAgtG11AY.60.000041
ORF1ab/nsp12174V174VgtAgtG11AY.640.000595
ORF1ab/nsp12174V174VgtAgtG11AY.650.000533
ORF1ab/nsp12174V174LGtaTta11AY.670.000464
ORF1ab/nsp12174V174VgtAgtG11AY.680.000274
ORF1ab/nsp12174V174IGtaAta11AY.740.000116
ORF1ab/nsp12174V174delGTA---11AY.750.000056
ORF1ab/nsp12174V174IGtaAta11AY.820.001357
ORF1ab/nsp12174V174IGtaAta11AY.830.001724
ORF1ab/nsp12174V174IGtaAta11AY.90.000068
ORF1ab/nsp12174V174AgTagCa11AY.9.20.000037
ORF1ab/nsp12174V174delGTA---11AY.990.001049
ORF1ab/nsp12174V174IGtaAta11AY.99.20.000092
ORF1ab/nsp12174V174VgtAgtG11AY.99.20.000092
ORF1ab/nsp12174V174delGTA---11B0.000128
ORF1ab/nsp12174V174del1gtAgt-11B.10.000009
ORF1ab/nsp12174V174IGtaAta11B.1.10.000018
ORF1ab/nsp12174V174GgTagGa11B.1.10.000018
ORF1ab/nsp12174V174del1gtAgt-11B.1.10.000018
ORF1ab/nsp12174V174delGTA---11B.1.1.10.000327
ORF1ab/nsp12174V174delGTA---11B.1.1.1390.022727
ORF1ab/nsp12174V174VgtAgtG11B.1.1.1760.000439
ORF1ab/nsp12174V174IGtaAta11B.1.1.2220.000204
ORF1ab/nsp12174V174IGtaAta11B.1.1.2290.005747
ORF1ab/nsp12174V174VgtAgtG11B.1.1.2940.001266
ORF1ab/nsp12174V174LGtaTta11B.1.1.3170.000412
ORF1ab/nsp12174V174delGTA---11B.1.1.3480.000796
ORF1ab/nsp12174V174IGtaAta11B.1.1.3510.002793
ORF1ab/nsp12174V174IGtaAta11B.1.1.3700.012658
ORF1ab/nsp12174V174VgtAgtG11B.1.1.390.00051
ORF1ab/nsp12174V174delGTA---11B.1.1.4340.000349
ORF1ab/nsp12174V174IGtaAta11B.1.1.4850.016667
ORF1ab/nsp12174V174AgTagCa11B.1.1.510.001718
ORF1ab/nsp12174V174IGtaAta11B.1.1600.000031
ORF1ab/nsp12174V174IGtaAta11B.1.1770.000013
ORF1ab/nsp12174V174AgTagCa11B.1.1770.000013
ORF1ab/nsp12174V174delGTA---11B.1.1770.000013
ORF1ab/nsp12174V174VgtAgtG11B.1.177.70.000165
ORF1ab/nsp12174V174VgtAgtG11B.1.177.790.002342
ORF1ab/nsp12174V174VgtAgtG11B.1.177.850.005435
ORF1ab/nsp12174V174IGtaAta11B.1.2060.000816
ORF1ab/nsp12174V174VgtAgtG11B.1.214.20.0006
ORF1ab/nsp12174V174IGtaAta11B.1.2340.000132
ORF1ab/nsp12174V174AgTagCa11B.1.2390.001221
ORF1ab/nsp12174V174VgtAgtG11B.1.2580.000067
ORF1ab/nsp12174V174del1gtAgt-11B.1.350.008475
ORF1ab/nsp12174V174AgTagCa11B.1.3510.00003
ORF1ab/nsp12174V174GgTagGa11B.1.36.290.000517
ORF1ab/nsp12174V174VgtAgtG11B.1.36.80.001
ORF1ab/nsp12174V174AgTagCa11B.1.4290.000024
ORF1ab/nsp12174V174VgtAgtG11B.1.4290.000024
ORF1ab/nsp12174V174IGtaAta11B.1.4530.003236
ORF1ab/nsp12174V174IGtaAta11B.1.5240.001406
ORF1ab/nsp12174V174del2gTAg--11B.1.5250.000113
ORF1ab/nsp12174V174AgTagCa11B.1.5260.000024
ORF1ab/nsp12174V174IGtaAta11B.1.5820.000491
ORF1ab/nsp12174V174VgtAgtG11B.1.5820.000491
ORF1ab/nsp12174V174VgtAgtG11B.1.595.40.007299
ORF1ab/nsp12174V174del1Gta-ta11B.1.5960.000087
ORF1ab/nsp12174V174AgTagCa11B.1.617.10.000129
ORF1ab/nsp12174V174del1gtAgt-11B.1.617.10.000129
ORF1ab/nsp12174V174VgtAgtG11B.1.6210.000089
ORF1ab/nsp12174V174delGTA---11B.340.013699
ORF1ab/nsp12174V174IGtaAta11B.400.000364
ORF1ab/nsp12174V174delGTA---11B.550.00295
ORF1ab/nsp12174V174VgtAgtG11C.370.000116
ORF1ab/nsp12174V174LGtaTta11D.20.000075
ORF1ab/nsp12174V174IGtaAta11N.80.03125
ORF1ab/nsp12174V174LGtaCta11P.10.000016
ORF1ab/nsp12174V174IGtaAta11P.1.10.000318
ORF1ab/nsp12174V174IGtaAta11P.1.150.000232
ORF1ab/nsp12174V174IGtaAta11P.1.160.000374
ORF1ab/nsp12174V174VgtAgtG11P.1.70.000319
ORF1ab/nsp12174V174IGtaAta11P.20.000187
ORF1ab/nsp12174V174IGtaAta11R.10.00009