CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 173 & Codon = cgT

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12173R173RR4565RsyncgCcgT3983740.93969913957-13959

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12173R173RcgCcgT374398All0.000072
ORF1ab/nsp12173R173RcgCcgT128128B.1.1.70.000115
ORF1ab/nsp12173R173RcgCcgT2123AY.40.000033
ORF1ab/nsp12173R173RcgCcgT2121B.1.1.4340.00732
ORF1ab/nsp12173R173RcgCcgT1313B.1.4480.034121
ORF1ab/nsp12173R173RcgCcgT1212B.1.4280.012245
ORF1ab/nsp12173R173RcgCcgT1212B.1.4290.000282
ORF1ab/nsp12173R173RcgCcgT1111B.1.6210.000974
ORF1ab/nsp12173R173RcgCcgT99AY.1210.001218
ORF1ab/nsp12173R173RcgCcgT99AY.260.000255
ORF1ab/nsp12173R173RcgCcgT88B.1.5610.003176
ORF1ab/nsp12173R173RcgCcgT78B.1.617.20.000026
ORF1ab/nsp12173R173RcgCcgT66AY.1030.000037
ORF1ab/nsp12173R173RcgCcgT66AY.1200.000223
ORF1ab/nsp12173R173RcgCcgT45AY.250.000024
ORF1ab/nsp12173R173RcgCcgT55AY.390.000124
ORF1ab/nsp12173R173RcgCcgT55AY.480.002326
ORF1ab/nsp12173R173RcgCcgT55B.10.000046
ORF1ab/nsp12173R173RcgCcgT55B.1.20.000044
ORF1ab/nsp12173R173RcgCcgT55B.1.2650.006353
ORF1ab/nsp12173R173RcgCcgT55P.10.000079
ORF1ab/nsp12173R173RcgCcgT44AY.39.10.000158
ORF1ab/nsp12173R173RcgCcgT44AY.440.000024
ORF1ab/nsp12173R173RcgCcgT44B.1.3510.000119
ORF1ab/nsp12173R173RcgCcgT44B.1.36.170.001976
ORF1ab/nsp12173R173RcgCcgT44B.1.5260.000094
ORF1ab/nsp12173R173RcgCcgT44B.1.5960.000349
ORF1ab/nsp12173R173RcgCcgT33AY.1130.000427
ORF1ab/nsp12173R173RcgCcgT33AY.99.20.000276
ORF1ab/nsp12173R173RcgCcgT33B.1.10.000054
ORF1ab/nsp12173R173RcgCcgT33B.1.1.2140.000166
ORF1ab/nsp12173R173RcgCcgT33B.1.4270.000151
ORF1ab/nsp12173R173RcgCcgT33B.1.5750.00091
ORF1ab/nsp12173R173RcgCcgT22AY.1170.000169
ORF1ab/nsp12173R173RcgCcgT12AY.4.20.000022
ORF1ab/nsp12173R173RcgCcgT22AY.46.30.001867
ORF1ab/nsp12173R173RcgCcgT22B.1.1110.00235
ORF1ab/nsp12173R173RcgCcgT22B.1.2210.000142
ORF1ab/nsp12173R173RcgCcgT22B.1.2430.000139
ORF1ab/nsp12173R173RcgCcgT12B.1.2580.000067
ORF1ab/nsp12173R173RcgCcgT22B.1.258.220.005333
ORF1ab/nsp12173R173RcgCcgT11AY.1020.000027
ORF1ab/nsp12173R173RcgCcgT11AY.1110.000183
ORF1ab/nsp12173R173RcgCcgT11AY.230.00007
ORF1ab/nsp12173R173RcgCcgT11AY.290.000016
ORF1ab/nsp12173R173RcgCcgT11AY.330.000067
ORF1ab/nsp12173R173RcgCcgT11AY.460.000104
ORF1ab/nsp12173R173RcgCcgT11AY.46.60.000072
ORF1ab/nsp12173R173RcgCcgT11AY.470.000031
ORF1ab/nsp12173R173RcgCcgT11AY.5.30.000337
ORF1ab/nsp12173R173RcgCcgT11AY.60.000041
ORF1ab/nsp12173R173RcgCcgT11AY.620.000436
ORF1ab/nsp12173R173RcgCcgT11AY.690.000187
ORF1ab/nsp12173R173RcgCcgT11B.1.1.2550.00303
ORF1ab/nsp12173R173RcgCcgT11B.1.1.4480.002033
ORF1ab/nsp12173R173RcgCcgT11B.1.1.5190.00004
ORF1ab/nsp12173R173RcgCcgT11B.1.1600.000031
ORF1ab/nsp12173R173RcgCcgT11B.1.360.000146
ORF1ab/nsp12173R173RcgCcgT11B.1.5250.000113
ORF1ab/nsp12173R173RcgCcgT11P.1.120.000484
ORF1ab/nsp12173R173RcgCcgT11P.20.000187
ORF1ab/nsp12173R173RcgCcgT11Q.10.000126