CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 169 & Codon = cTa

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12169P169LP4561LnonsyncCacTa1641580.96341513945-13947

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12169P169LcCacTa158164All0.00003
ORF1ab/nsp12169P169LcCacTa4141AY.260.001161
ORF1ab/nsp12169P169LcCacTa3131B.1.2210.002202
ORF1ab/nsp12169P169LcCacTa2222AY.40.000034
ORF1ab/nsp12169P169LcCacTa1112B.1.617.20.000041
ORF1ab/nsp12169P169LcCacTa1111B.1.1.70.00001
ORF1ab/nsp12169P169LcCacTa270.111111
ORF1ab/nsp12169P169LcCacTa66B.1.10.000109
ORF1ab/nsp12169P169LcCacTa55AY.250.00003
ORF1ab/nsp12169P169LcCacTa55P.1.160.001871
ORF1ab/nsp12169P169LcCacTa44AY.430.000018
ORF1ab/nsp12169P169LcCacTa44B.10.000037
ORF1ab/nsp12169P169LcCacTa22AY.1030.000012
ORF1ab/nsp12169P169LcCacTa22AY.240.000862
ORF1ab/nsp12169P169LcCacTa22B.1.20.000018
ORF1ab/nsp12169P169LcCacTa11AY.1100.000113
ORF1ab/nsp12169P169LcCacTa11AY.230.00007
ORF1ab/nsp12169P169LcCacTa11AY.750.000056
ORF1ab/nsp12169P169LcCacTa11AY.98.10.000048
ORF1ab/nsp12169P169LcCacTa11B0.000128
ORF1ab/nsp12169P169LcCacTa11B.1.160.160.000929
ORF1ab/nsp12169P169LcCacTa11B.1.1770.000013
ORF1ab/nsp12169P169LcCacTa11B.1.177.730.000566
ORF1ab/nsp12169P169LcCacTa11B.1.3110.000275
ORF1ab/nsp12169P169LcCacTa11P.10.000016