CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp12 : CodonNum = 140

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp12140D140DD4532DsyngaCgaT121029121029113858-13860
ORF1ab/nsp12140D140YD4532YnonsynGacTac308030780.99935113858-13860
ORF1ab/nsp12140D140YD4532YnonsynGaCTaT308020.00064935113858-13860
ORF1ab/nsp12140D140GD4532GnonsyngAcgGc2792740.98207913858-13860
ORF1ab/nsp12140D140GD4532GnonsyngACgGT27950.017921113858-13860
ORF1ab/nsp12140D140ND4532NnonsynGacAac104104113858-13860
ORF1ab/nsp12140D140AD4532AnonsyngAcgCc49410.83673513858-13860
ORF1ab/nsp12140D140AD4532AnonsyngACgCT4980.16326513858-13860
ORF1ab/nsp12140D140ED4532EnonsyngaCgaA38340.89473713858-13860
ORF1ab/nsp12140D140ED4532EnonsyngaCgaG3840.10526313858-13860
ORF1ab/nsp12140D140HD4532HnonsynGacCac1313113858-13860
ORF1ab/nsp12140D140delD4532deldelGAC---1212113858-13860
ORF1ab/nsp12140D140VD4532VnonsyngAcgTc1270.58333313858-13860
ORF1ab/nsp12140D140VD4532VnonsyngACgTT1230.2513858-13860
ORF1ab/nsp12140D140VD4532VnonsyngACgTG1210.083333313858-13860
ORF1ab/nsp12140D140VD4532VnonsyngACgTA1210.083333313858-13860
ORF1ab/nsp12140D140del2D4532del2delgACg--55113858-13860
ORF1ab/nsp12140D140FD4532FnonsynGAcTTc430.7513858-13860
ORF1ab/nsp12140D140FD4532FnonsynGACTTT410.2513858-13860
ORF1ab/nsp12140D140del1D4532del1delgaCga-210.513858-13860
ORF1ab/nsp12140D140del1D4532del1delGac-ac210.513858-13860
ORF1ab/nsp12140D140KD4532KnonsynGaCAaG11113858-13860

Details of the mutation no within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp12140D140DgaCgaT121029121029All0.023148
ORF1ab/nsp12140D140DgaCgaT6250062500P.10.984624
ORF1ab/nsp12140D140DgaCgaT2090420904P.1.140.999235
ORF1ab/nsp12140D140DgaCgaT61406140P.1.170.993206
ORF1ab/nsp12140D140DgaCgaT42784278P.1.150.993959
ORF1ab/nsp12140D140DgaCgaT36893689P.1.100.994072
ORF1ab/nsp12140D140DgaCgaT31173117P.1.70.995211
ORF1ab/nsp12140D140YGacTac30783080All0.000589
ORF1ab/nsp12140D140YGaCTaT23080All0
ORF1ab/nsp12140D140DgaCgaT30293029P.1.10.962198
ORF1ab/nsp12140D140DgaCgaT26252625P.1.160.982043
ORF1ab/nsp12140D140DgaCgaT19531953P.1.120.945305
ORF1ab/nsp12140D140DgaCgaT11791179B.1.1.70.001055
ORF1ab/nsp12140D140DgaCgaT11431143P.1.17.11
ORF1ab/nsp12140D140DgaCgaT11051105P.1.130.992812
ORF1ab/nsp12140D140DgaCgaT10231023P.1.40.999023
ORF1ab/nsp12140D140YGacTac967968AY.40.001505
ORF1ab/nsp12140D140YGaCTaT1968AY.40.000002
ORF1ab/nsp12140D140DgaCgaT864864P.1.20.998844
ORF1ab/nsp12140D140DgaCgaT681681AY.540.064931
ORF1ab/nsp12140D140DgaCgaT615615AY.40.000957
ORF1ab/nsp12140D140DgaCgaT511511P.1.60.994163
ORF1ab/nsp12140D140YGacTac463463B.1.36.211
ORF1ab/nsp12140D140DgaCgaT354354B.1.20.003117
ORF1ab/nsp12140D140GgAcgGc274279All0.000052
ORF1ab/nsp12140D140GgACgGT5279All0.000001
ORF1ab/nsp12140D140DgaCgaT260260B.1.617.20.000979
ORF1ab/nsp12140D140DgaCgaT247247B.10.002262
ORF1ab/nsp12140D140DgaCgaT236236B.1.10.004281
ORF1ab/nsp12140D140DgaCgaT209209P.1.81
ORF1ab/nsp12140D140DgaCgaT208208P.1.91
ORF1ab/nsp12140D140YGacTac204204B.1.1.70.000183
ORF1ab/nsp12140D140DgaCgaT198198AY.4.20.004294
ORF1ab/nsp12140D140DgaCgaT183183AY.440.001114
ORF1ab/nsp12140D140DgaCgaT159159AY.250.000956
ORF1ab/nsp12140D140DgaCgaT155155B.1.1270.340659
ORF1ab/nsp12140D140YGacTac152152AY.460.01582
ORF1ab/nsp12140D140YGacTac145145AY.430.000642
ORF1ab/nsp12140D140DgaCgaT141141B.1.4290.003318
ORF1ab/nsp12140D140GgAcgGc138138AY.30.001373
ORF1ab/nsp12140D140DgaCgaT134134AY.430.000594
ORF1ab/nsp12140D140DgaCgaT123123P.1.10.11
ORF1ab/nsp12140D140DgaCgaT117117B.1.2400.025221
ORF1ab/nsp12140D140NGacAac104104All0.00002
ORF1ab/nsp12140D140DgaCgaT9898P.1.111
ORF1ab/nsp12140D140DgaCgaT9797AY.1190.003425
ORF1ab/nsp12140D140DgaCgaT9393B.1.3490.066476
ORF1ab/nsp12140D140DgaCgaT9292B.1.1770.001211
ORF1ab/nsp12140D140DgaCgaT8585AY.1030.000528
ORF1ab/nsp12140D140YGacTac8585AY.50.001755
ORF1ab/nsp12140D140DgaCgaT7878AY.130.012556
ORF1ab/nsp12140D140DgaCgaT7878B.1.177.860.014309
ORF1ab/nsp12140D140DgaCgaT7474B.1.6220.961039
ORF1ab/nsp12140D140YGacTac7171B.1.617.20.000267
ORF1ab/nsp12140D140DgaCgaT6969AY.200.002682
ORF1ab/nsp12140D140DgaCgaT6969B.1.2430.004801
ORF1ab/nsp12140D140YGacTac6868AY.270.004401
ORF1ab/nsp12140D140DgaCgaT6868B.1.4270.003434
ORF1ab/nsp12140D140YGacTac6767B.1.438.10.007187
ORF1ab/nsp12140D140YGacTac6161AY.250.000367
ORF1ab/nsp12140D140YGacTac6161B.1.617.10.007867
ORF1ab/nsp12140D140DgaCgaT5757B.1.5750.017294
ORF1ab/nsp12140D140DgaCgaT5656AY.30.000557
ORF1ab/nsp12140D140DgaCgaT5151B.1.5660.980769
ORF1ab/nsp12140D140YGacTac5050B.1.5230.122549
ORF1ab/nsp12140D140DgaCgaT5050B.1.5910.531915
ORF1ab/nsp12140D140AgAcgCc4149All0.000008
ORF1ab/nsp12140D140AgACgCT849All0.000002
ORF1ab/nsp12140D140NGacAac4646B.1.1770.000606
ORF1ab/nsp12140D140DgaCgaT4646B.1.258.170.004783
ORF1ab/nsp12140D140YGacTac4545AY.1030.000279
ORF1ab/nsp12140D140DgaCgaT4444AY.98.10.002131
ORF1ab/nsp12140D140DgaCgaT4444AY.99.20.004055
ORF1ab/nsp12140D140YGacTac4444B.1.1.5190.001747
ORF1ab/nsp12140D140DgaCgaT4242C.370.004875
ORF1ab/nsp12140D140DgaCgaT4242R.10.00378
ORF1ab/nsp12140D140DgaCgaT4141B.1.1.5190.001628
ORF1ab/nsp12140D140DgaCgaT4141B.1.1600.001279
ORF1ab/nsp12140D140YGacTac3939B.1.5950.010177
ORF1ab/nsp12140D140EgaCgaA3438All0.000007
ORF1ab/nsp12140D140EgaCgaG438All0.000001
ORF1ab/nsp12140D140DgaCgaT3838B.1.2210.002699
ORF1ab/nsp12140D140DgaCgaT3636B.1.1.280.011204
ORF1ab/nsp12140D140DgaCgaT3636B.1.6090.017258
ORF1ab/nsp12140D140DgaCgaT3434AY.1020.000901
ORF1ab/nsp12140D140DgaCgaT3434B.1.1.5280.163462
ORF1ab/nsp12140D140DgaCgaT3434B.1.5260.000799
ORF1ab/nsp12140D140DgaCgaT3333B.1.3510.000981
ORF1ab/nsp12140D140YGacTac3232AY.260.000906
ORF1ab/nsp12140D140DgaCgaT3232AY.50.000661
ORF1ab/nsp12140D140GgAcgGc3232B.1.1.70.000029
ORF1ab/nsp12140D140DgaCgaT3131AY.4.40.012684
ORF1ab/nsp12140D140DgaCgaT3030AY.39.10.001188
ORF1ab/nsp12140D140YGacTac3030B.1.2890.079787
ORF1ab/nsp12140D140DgaCgaT2929B.1.177.650.019295
ORF1ab/nsp12140D140YGacTac2929B.1.2340.003826
ORF1ab/nsp12140D140DgaCgaT2929B.1.2580.00193
ORF1ab/nsp12140D140DgaCgaT2929P.1.31
ORF1ab/nsp12140D140YGacTac2828B.1.1770.000369
ORF1ab/nsp12140D140DgaCgaT2828B.1.177.350.01935
ORF1ab/nsp12140D140DgaCgaT2828B.1.6210.002479
ORF1ab/nsp12140D140DgaCgaT2727AY.1200.001004
ORF1ab/nsp12140D140YGacTac2626B.1.20.000229
ORF1ab/nsp12140D140DgaCgaT2626B.1.2340.003431
ORF1ab/nsp12140D140DgaCgaT2525AY.390.000618
ORF1ab/nsp12140D140YGacTac2525B.10.000229
ORF1ab/nsp12140D140DgaCgaT2424B.1.177.810.004544
ORF1ab/nsp12140D140DgaCgaT2424P.1.10.21
ORF1ab/nsp12140D140DgaCgaT2424P.20.004479
ORF1ab/nsp12140D140DgaCgaT2222AY.260.000623
ORF1ab/nsp12140D140YGacTac2222AY.440.000134
ORF1ab/nsp12140D140YGacTac2121AY.390.000519
ORF1ab/nsp12140D140YGacTac2020AY.370.006321
ORF1ab/nsp12140D140YGacTac2020B.1.3510.000595
ORF1ab/nsp12140D140YGacTac2020B.1.4270.00101
ORF1ab/nsp12140D140DgaCgaT1919B.1.1.3170.007822
ORF1ab/nsp12140D140DgaCgaT1919B.1.177.210.001453
ORF1ab/nsp12140D140DgaCgaT1818B.1.5770.012371
ORF1ab/nsp12140D140DgaCgaT1717B.1.1.470.090909
ORF1ab/nsp12140D140DgaCgaT1616AY.1040.031746
ORF1ab/nsp12140D140DgaCgaT1616AY.470.000498
ORF1ab/nsp12140D140DgaCgaT1616AY.9.20.000588
ORF1ab/nsp12140D140DgaCgaT1515AY.1000.00069
ORF1ab/nsp12140D140DgaCgaT1515AY.290.000237
ORF1ab/nsp12140D140DgaCgaT1414AY.850.00598
ORF1ab/nsp12140D140HGacCac1313All0.000002
ORF1ab/nsp12140D140DgaCgaT1313AY.1010.006376
ORF1ab/nsp12140D140YGacTac1313AY.30.000129
ORF1ab/nsp12140D140DgaCgaT1313B.1.1.3060.005699
ORF1ab/nsp12140D140DgaCgaT1313P.1.51
ORF1ab/nsp12140D140delGAC---1212All0.000002
ORF1ab/nsp12140D140VgAcgTc712All0.000001
ORF1ab/nsp12140D140VgACgTT312All0.000001
ORF1ab/nsp12140D140VgACgTG112All0
ORF1ab/nsp12140D140VgACgTA112All0
ORF1ab/nsp12140D140DgaCgaT1212AY.330.000801
ORF1ab/nsp12140D140DgaCgaT1212AY.420.000483
ORF1ab/nsp12140D140DgaCgaT1212B.1.1.2910.008909
ORF1ab/nsp12140D140DgaCgaT1212B.1.4000.005148
ORF1ab/nsp12140D140YGacTac1212B.1.4290.000282
ORF1ab/nsp12140D140GgAcgGc1212B.1.617.20.000045
ORF1ab/nsp12140D140NGacAac1111AY.1030.000068
ORF1ab/nsp12140D140DgaCgaT1111AY.60.000452
ORF1ab/nsp12140D140DgaCgaT1111B.1.5960.000959
ORF1ab/nsp12140D140DgaCgaT1010A.2.50.00499
ORF1ab/nsp12140D140YGacTac1010A.230.105263
ORF1ab/nsp12140D140DgaCgaT1010AY.230.000697
ORF1ab/nsp12140D140AgAcgCc1010AY.30.000099
ORF1ab/nsp12140D140NGacAac1010AY.46.60.000722
ORF1ab/nsp12140D140DgaCgaT1010AY.610.001048
ORF1ab/nsp12140D140NGacAac1010B.1.1.70.000009
ORF1ab/nsp12140D140AgAcgCc1010B.1.1.70.000009
ORF1ab/nsp12140D140YGacTac99AY.1020.000239
ORF1ab/nsp12140D140DgaCgaT99AY.46.60.00065
ORF1ab/nsp12140D140DgaCgaT99AY.950.006849
ORF1ab/nsp12140D140YGacTac99B.1.1.2160.008014
ORF1ab/nsp12140D140DgaCgaT99B.1.1.2530.022556
ORF1ab/nsp12140D140DgaCgaT99B.1.1.630.003472
ORF1ab/nsp12140D140EgaCgaA99B.1.258.140.008824
ORF1ab/nsp12140D140DgaCgaT99Q.10.001137
ORF1ab/nsp12140D140YGacTac88AY.1190.000282
ORF1ab/nsp12140D140YGacTac88AY.290.000126
ORF1ab/nsp12140D140DgaCgaT88AY.340.000776
ORF1ab/nsp12140D140DgaCgaT88AY.9.10.00067
ORF1ab/nsp12140D140YGacTac88AY.940.003541
ORF1ab/nsp12140D140YGacTac88B.1.10.000145
ORF1ab/nsp12140D140GgAcgGc88B.1.10.000145
ORF1ab/nsp12140D140GgAcgGc88B.1.1.1590.037383
ORF1ab/nsp12140D140DgaCgaT88B.1.1.2220.001632
ORF1ab/nsp12140D140GgAcgGc88B.1.3510.000238
ORF1ab/nsp12140D140DgaCgaT88B.1.36.290.004139
ORF1ab/nsp12140D140DgaCgaT88B.1.5250.000905
ORF1ab/nsp12140D140DgaCgaT88C.37.10.020942
ORF1ab/nsp12140D140DgaCgaT77A.10.001973
ORF1ab/nsp12140D140DgaCgaT77AY.4.2.10.001043
ORF1ab/nsp12140D140YGacTac77AY.4.50.000752
ORF1ab/nsp12140D140YGacTac77AY.9.20.000257
ORF1ab/nsp12140D140DgaCgaT77B.1.1.3110.002507
ORF1ab/nsp12140D140DgaCgaT77B.1.1.330.002946
ORF1ab/nsp12140D140DgaCgaT77B.1.1.3910.059829
ORF1ab/nsp12140D140GgAcgGc77B.1.1600.000218
ORF1ab/nsp12140D140GgAcgGc77B.1.20.000062
ORF1ab/nsp12140D140DgaCgaT77B.1.360.001021
ORF1ab/nsp12140D140DgaCgaT77B.1.438.10.000751
ORF1ab/nsp12140D140DgaCgaT77B.1.5880.006369
ORF1ab/nsp12140D140DgaCgaT77B.1.6200.006623
ORF1ab/nsp12140D140DgaCgaT77D.20.000525
ORF1ab/nsp12140D140AgACgCT660.333333
ORF1ab/nsp12140D140DgaCgaT66AY.1130.000854
ORF1ab/nsp12140D140DgaCgaT66AY.1170.000507
ORF1ab/nsp12140D140DgaCgaT66AY.1210.000812
ORF1ab/nsp12140D140GgAcgGc66AY.420.000241
ORF1ab/nsp12140D140GgAcgGc66AY.430.000027
ORF1ab/nsp12140D140DgaCgaT66AY.450.00073
ORF1ab/nsp12140D140YGacTac66AY.980.000474
ORF1ab/nsp12140D140YGacTac66AY.98.10.000291
ORF1ab/nsp12140D140DgaCgaT66B.1.177.770.004357
ORF1ab/nsp12140D140EgaCgaA66B.1.351.50.003597
ORF1ab/nsp12140D140YGacTac66B.1.5510.007742
ORF1ab/nsp12140D140del2gACg--55All0.000001
ORF1ab/nsp12140D140DgaCgaT55AY.160.001898
ORF1ab/nsp12140D140YGacTac55AY.230.000349
ORF1ab/nsp12140D140YGacTac55AY.330.000334
ORF1ab/nsp12140D140YGacTac55AY.60.000206
ORF1ab/nsp12140D140YGacTac55AY.700.001043
ORF1ab/nsp12140D140DgaCgaT55B.1.1.3690.002231
ORF1ab/nsp12140D140EgaCgaA35B.1.1.70.000003
ORF1ab/nsp12140D140EgaCgaG25B.1.1.70.000002
ORF1ab/nsp12140D140DgaCgaT55B.1.177.330.008224
ORF1ab/nsp12140D140DgaCgaT55B.1.177.420.004472
ORF1ab/nsp12140D140DgaCgaT55B.1.3110.001373
ORF1ab/nsp12140D140DgaCgaT55B.1.3960.003529
ORF1ab/nsp12140D140DgaCgaT55B.1.4160.006345
ORF1ab/nsp12140D140DgaCgaT55B.1.4970.001574
ORF1ab/nsp12140D140NGacAac55B.1.5640.002129
ORF1ab/nsp12140D140YGacTac55B.1.5650.004052
ORF1ab/nsp12140D140DgaCgaT55B.1.617.10.000645
ORF1ab/nsp12140D140DgaCgaT55B.1.6230.002682
ORF1ab/nsp12140D140DgaCgaT55P.30.007974
ORF1ab/nsp12140D140DgaCgaT55Q.80.000825
ORF1ab/nsp12140D140FGAcTTc340.166667
ORF1ab/nsp12140D140FGACTTT140.055556
ORF1ab/nsp12140D140DgaCgaT44A0.001548
ORF1ab/nsp12140D140DgaCgaT44AD.20.000876
ORF1ab/nsp12140D140FGAcTTc34All0.000001
ORF1ab/nsp12140D140FGACTTT14All0
ORF1ab/nsp12140D140DgaCgaT44AY.1050.002572
ORF1ab/nsp12140D140DgaCgaT44AY.1140.000924
ORF1ab/nsp12140D140DgaCgaT44AY.1180.000251
ORF1ab/nsp12140D140DgaCgaT44AY.140.000352
ORF1ab/nsp12140D140DgaCgaT44AY.300.001583
ORF1ab/nsp12140D140DgaCgaT44AY.360.000593
ORF1ab/nsp12140D140AgAcgCc44AY.40.000006
ORF1ab/nsp12140D140GgAcgGc44AY.40.000006
ORF1ab/nsp12140D140YGacTac44AY.5.40.001107
ORF1ab/nsp12140D140DgaCgaT44AY.750.000224
ORF1ab/nsp12140D140DgaCgaT44AY.80.002424
ORF1ab/nsp12140D140DgaCgaT44B0.000511
ORF1ab/nsp12140D140DgaCgaT44B.1.1.2140.000222
ORF1ab/nsp12140D140DgaCgaT44B.1.1.5230.00625
ORF1ab/nsp12140D140DgaCgaT44B.1.177.570.001124
ORF1ab/nsp12140D140YGacTac44B.1.2430.000278
ORF1ab/nsp12140D140DgaCgaT44B.1.466.20.001565
ORF1ab/nsp12140D140DgaCgaT44B.1.5950.001044
ORF1ab/nsp12140D140DgaCgaT44B.1.6370.000292
ORF1ab/nsp12140D140YGacTac44Q.10.000505
ORF1ab/nsp12140D140DgaCgaT33A.23.10.002113
ORF1ab/nsp12140D140YGacTac33AY.1130.000427
ORF1ab/nsp12140D140YGacTac33AY.1200.000112
ORF1ab/nsp12140D140YGacTac33AY.130.000483
ORF1ab/nsp12140D140YGacTac33AY.200.000117
ORF1ab/nsp12140D140DgaCgaT33AY.280.005671
ORF1ab/nsp12140D140NGacAac33AY.40.000005
ORF1ab/nsp12140D140VgAcgTc33AY.40.000005
ORF1ab/nsp12140D140YGacTac33AY.4.20.000065
ORF1ab/nsp12140D140EgaCgaA33AY.440.000018
ORF1ab/nsp12140D140YGacTac33AY.450.000365
ORF1ab/nsp12140D140DgaCgaT33AY.46.40.000494
ORF1ab/nsp12140D140NGacAac33AY.470.000093
ORF1ab/nsp12140D140DgaCgaT33AY.5.40.00083
ORF1ab/nsp12140D140GgAcgGc33AY.540.000286
ORF1ab/nsp12140D140DgaCgaT33AY.650.001599
ORF1ab/nsp12140D140DgaCgaT33AY.75.10.000541
ORF1ab/nsp12140D140DgaCgaT33AY.980.000237
ORF1ab/nsp12140D140YGacTac33AY.99.20.000276
ORF1ab/nsp12140D140YGacTac33B.1.1.2220.000612
ORF1ab/nsp12140D140DgaCgaT33B.1.1.2410.006211
ORF1ab/nsp12140D140DgaCgaT33B.1.1.2940.003797
ORF1ab/nsp12140D140DgaCgaT33B.1.1.3720.002066
ORF1ab/nsp12140D140DgaCgaT33B.1.1.4090.008499
ORF1ab/nsp12140D140DgaCgaT33B.1.1.500.002037
ORF1ab/nsp12140D140GgAcgGc33B.1.1.5190.000119
ORF1ab/nsp12140D140DgaCgaT33B.1.1260.003827
ORF1ab/nsp12140D140DgaCgaT33B.1.1470.002268
ORF1ab/nsp12140D140GgAcgGc33B.1.1490.010274
ORF1ab/nsp12140D140YGacTac33B.1.1600.000094
ORF1ab/nsp12140D140GgAcgGc33B.1.1770.00004
ORF1ab/nsp12140D140DgaCgaT33B.1.177.70.000495
ORF1ab/nsp12140D140DgaCgaT33B.1.258.230.071429
ORF1ab/nsp12140D140DgaCgaT33B.1.3050.006452
ORF1ab/nsp12140D140GgAcgGc33B.1.36.80.003
ORF1ab/nsp12140D140DgaCgaT33B.1.4650.011407
ORF1ab/nsp12140D140DgaCgaT33B.1.4700.004213
ORF1ab/nsp12140D140YGacTac33B.1.5260.000071
ORF1ab/nsp12140D140DgaCgaT33B.1.5600.013889
ORF1ab/nsp12140D140DgaCgaT33B.1.5710.029126
ORF1ab/nsp12140D140GgACgGT33P.10.000047
ORF1ab/nsp12140D140YGacTac33P.20.00056
ORF1ab/nsp12140D140DgaCgaT33Q.40.001364
ORF1ab/nsp12140D140EgaCgaA220.111111
ORF1ab/nsp12140D140YGaCTaT120.055556
ORF1ab/nsp12140D140YGacTac120.055556
ORF1ab/nsp12140D140VgACgTT120.055556
ORF1ab/nsp12140D140VgAcgTc120.055556
ORF1ab/nsp12140D140NGacAac22A0.000774
ORF1ab/nsp12140D140GgAcgGc22AD.20.000438
ORF1ab/nsp12140D140del1gaCga-12All0
ORF1ab/nsp12140D140del1Gac-ac12All0
ORF1ab/nsp12140D140DgaCgaT22AY.1110.000366
ORF1ab/nsp12140D140YGacTac22AY.1160.000574
ORF1ab/nsp12140D140YGacTac22AY.1170.000169
ORF1ab/nsp12140D140YGacTac22AY.1180.000125
ORF1ab/nsp12140D140YGacTac22AY.140.000176
ORF1ab/nsp12140D140DgaCgaT22AY.270.000129
ORF1ab/nsp12140D140NGacAac22AY.290.000032
ORF1ab/nsp12140D140DgaCgaT22AY.350.000466
ORF1ab/nsp12140D140HGacCac22AY.40.000003
ORF1ab/nsp12140D140GgAcgGc22AY.4.20.000043
ORF1ab/nsp12140D140YGacTac22AY.4.40.000818
ORF1ab/nsp12140D140DgaCgaT22AY.4.50.000215
ORF1ab/nsp12140D140GgAcgGc22AY.440.000012
ORF1ab/nsp12140D140DgaCgaT22AY.5.30.000675
ORF1ab/nsp12140D140DgaCgaT22AY.510.001818
ORF1ab/nsp12140D140DgaCgaT22AY.520.001629
ORF1ab/nsp12140D140YGacTac22AY.670.000929
ORF1ab/nsp12140D140DgaCgaT22AY.7.10.000225
ORF1ab/nsp12140D140DgaCgaT22AY.710.00095
ORF1ab/nsp12140D140YGacTac22AY.750.000112
ORF1ab/nsp12140D140YGacTac22AY.75.10.000361
ORF1ab/nsp12140D140YGacTac22AY.9.10.000167
ORF1ab/nsp12140D140EgaCgaA22AY.9.20.000073
ORF1ab/nsp12140D140DgaCgaT22AY.920.000575
ORF1ab/nsp12140D140YGacTac22AY.920.000575
ORF1ab/nsp12140D140EgaCgaA12B.10.000009
ORF1ab/nsp12140D140EgaCgaG12B.10.000009
ORF1ab/nsp12140D140HGacCac22B.1.10.000036
ORF1ab/nsp12140D140DgaCgaT22B.1.1.100.00223
ORF1ab/nsp12140D140DgaCgaT22B.1.1.1610.007067
ORF1ab/nsp12140D140DgaCgaT22B.1.1.2200.003717
ORF1ab/nsp12140D140DgaCgaT22B.1.1.250.001137
ORF1ab/nsp12140D140DgaCgaT22B.1.1.2840.000215
ORF1ab/nsp12140D140YGacTac22B.1.1.2940.002532
ORF1ab/nsp12140D140YGacTac22B.1.1.3120.003824
ORF1ab/nsp12140D140DgaCgaT22B.1.1.3180.000604
ORF1ab/nsp12140D140DgaCgaT22B.1.1.390.001019
ORF1ab/nsp12140D140DgaCgaT22B.1.1.3970.004505
ORF1ab/nsp12140D140DgaCgaT22B.1.1.5070.017391
ORF1ab/nsp12140D140YGacTac22B.1.1.5160.133333
ORF1ab/nsp12140D140delGAC---22B.1.1.70.000002
ORF1ab/nsp12140D140VgACgTT12B.1.1.70.000001
ORF1ab/nsp12140D140VgACgTA12B.1.1.70.000001
ORF1ab/nsp12140D140DgaCgaT22B.1.1.700.000682
ORF1ab/nsp12140D140DgaCgaT22B.1.160.320.008584
ORF1ab/nsp12140D140DgaCgaT22B.1.177.160.001329
ORF1ab/nsp12140D140DgaCgaT22B.1.177.460.001837
ORF1ab/nsp12140D140DgaCgaT22B.1.177.530.004785
ORF1ab/nsp12140D140DgaCgaT22B.1.177.730.001133
ORF1ab/nsp12140D140DgaCgaT22B.1.177.760.004988
ORF1ab/nsp12140D140del2gACg--22B.1.20.000018
ORF1ab/nsp12140D140HGacCac22B.1.20.000018
ORF1ab/nsp12140D140DgaCgaT22B.1.2130.029851
ORF1ab/nsp12140D140DgaCgaT22B.1.214.20.001199
ORF1ab/nsp12140D140YGacTac22B.1.2210.000142
ORF1ab/nsp12140D140DgaCgaT22B.1.3200.002491
ORF1ab/nsp12140D140DgaCgaT22B.1.3240.00321
ORF1ab/nsp12140D140HGacCac22B.1.3510.000059
ORF1ab/nsp12140D140DgaCgaT22B.1.36.180.00084
ORF1ab/nsp12140D140DgaCgaT22B.1.3690.00057
ORF1ab/nsp12140D140YGacTac22B.1.3960.001411
ORF1ab/nsp12140D140DgaCgaT22B.1.3990.003868
ORF1ab/nsp12140D140DgaCgaT22B.1.4280.002041
ORF1ab/nsp12140D140AgAcgCc22B.1.4290.000047
ORF1ab/nsp12140D140DgaCgaT22B.1.5380.016129
ORF1ab/nsp12140D140AgAcgCc22B.1.5960.000174
ORF1ab/nsp12140D140EgaCgaA12B.1.617.20.000004
ORF1ab/nsp12140D140EgaCgaG12B.1.617.20.000004
ORF1ab/nsp12140D140DgaCgaT22B.1.6270.00404
ORF1ab/nsp12140D140DgaCgaT22B.400.000729
ORF1ab/nsp12140D140DgaCgaT22C.360.001821
ORF1ab/nsp12140D140YGacTac22N.90.011905
ORF1ab/nsp12140D140AgACgCT22P.10.000032
ORF1ab/nsp12140D140DgaCgaT22P.40.007605
ORF1ab/nsp12140D140DgaCgaT22Q.30.00029
ORF1ab/nsp12140D140DgaCgaT110.055556
ORF1ab/nsp12140D140DgaCgaT11A.2.20.001689
ORF1ab/nsp12140D140EgaCgaA11A.2.50.000499
ORF1ab/nsp12140D140DgaCgaT11A.210.00277
ORF1ab/nsp12140D140YGacTac11AA.30.027027
ORF1ab/nsp12140D140YGacTac11AA.40.009091
ORF1ab/nsp12140D140KGaCAaG11All0
ORF1ab/nsp12140D140DgaCgaT11AU.30.00211
ORF1ab/nsp12140D140DgaCgaT11AY.100.00053
ORF1ab/nsp12140D140YGacTac11AY.1000.000046
ORF1ab/nsp12140D140NGacAac11AY.1020.000027
ORF1ab/nsp12140D140GgAcgGc11AY.1030.000006
ORF1ab/nsp12140D140YGacTac11AY.1040.001984
ORF1ab/nsp12140D140YGacTac11AY.1050.000643
ORF1ab/nsp12140D140DgaCgaT11AY.1060.000335
ORF1ab/nsp12140D140NGacAac11AY.1060.000335
ORF1ab/nsp12140D140DgaCgaT11AY.1080.001103
ORF1ab/nsp12140D140YGacTac11AY.1100.000113
ORF1ab/nsp12140D140DgaCgaT11AY.1160.000287
ORF1ab/nsp12140D140DgaCgaT11AY.120.000316
ORF1ab/nsp12140D140delGAC---11AY.1200.000037
ORF1ab/nsp12140D140GgAcgGc11AY.1200.000037
ORF1ab/nsp12140D140YGacTac11AY.120.10.000321
ORF1ab/nsp12140D140DgaCgaT11AY.120.10.000321
ORF1ab/nsp12140D140YGacTac11AY.120.20.001285
ORF1ab/nsp12140D140AgAcgCc11AY.130.000161
ORF1ab/nsp12140D140VgAcgTc11AY.200.000039
ORF1ab/nsp12140D140AgAcgCc11AY.200.000039
ORF1ab/nsp12140D140GgAcgGc11AY.230.00007
ORF1ab/nsp12140D140AgAcgCc11AY.230.00007
ORF1ab/nsp12140D140DgaCgaT11AY.23.10.000417
ORF1ab/nsp12140D140DgaCgaT11AY.240.000431
ORF1ab/nsp12140D140delGAC---11AY.250.000006
ORF1ab/nsp12140D140NGacAac11AY.250.000006
ORF1ab/nsp12140D140GgAcgGc11AY.250.000006
ORF1ab/nsp12140D140del2gACg--11AY.250.000006
ORF1ab/nsp12140D140delGAC---11AY.30.00001
ORF1ab/nsp12140D140YGacTac11AY.3.10.000085
ORF1ab/nsp12140D140YGacTac11AY.320.000532
ORF1ab/nsp12140D140DgaCgaT11AY.320.000532
ORF1ab/nsp12140D140AgAcgCc11AY.330.000067
ORF1ab/nsp12140D140EgaCgaA11AY.330.000067
ORF1ab/nsp12140D140GgAcgGc11AY.330.000067
ORF1ab/nsp12140D140YGacTac11AY.380.000499
ORF1ab/nsp12140D140DgaCgaT11AY.380.000499
ORF1ab/nsp12140D140EgaCgaA11AY.40.000002
ORF1ab/nsp12140D140YGacTac11AY.4.30.000842
ORF1ab/nsp12140D140YGacTac11AY.400.000964
ORF1ab/nsp12140D140YGacTac11AY.410.000294
ORF1ab/nsp12140D140YGacTac11AY.420.00004
ORF1ab/nsp12140D140HGacCac11AY.430.000004
ORF1ab/nsp12140D140KGaCAaG11AY.440.000006
ORF1ab/nsp12140D140AgAcgCc11AY.440.000006
ORF1ab/nsp12140D140del2gACg--11AY.450.000122
ORF1ab/nsp12140D140DgaCgaT11AY.46.10.001027
ORF1ab/nsp12140D140NGacAac11AY.46.40.000165
ORF1ab/nsp12140D140DgaCgaT11AY.46.50.000198
ORF1ab/nsp12140D140NGacAac11AY.46.50.000198
ORF1ab/nsp12140D140YGacTac11AY.46.60.000072
ORF1ab/nsp12140D140DgaCgaT11AY.490.003195
ORF1ab/nsp12140D140AgAcgCc11AY.50.000021
ORF1ab/nsp12140D140GgAcgGc11AY.5.40.000277
ORF1ab/nsp12140D140YGacTac11AY.510.000909
ORF1ab/nsp12140D140DgaCgaT11AY.550.000917
ORF1ab/nsp12140D140DgaCgaT11AY.590.00053
ORF1ab/nsp12140D140GgAcgGc11AY.60.000041
ORF1ab/nsp12140D140YGacTac11AY.610.000105
ORF1ab/nsp12140D140YGacTac11AY.620.000436
ORF1ab/nsp12140D140DgaCgaT11AY.620.000436
ORF1ab/nsp12140D140DgaCgaT11AY.630.000387
ORF1ab/nsp12140D140NGacAac11AY.630.000387
ORF1ab/nsp12140D140YGacTac11AY.630.000387
ORF1ab/nsp12140D140YGacTac11AY.640.000595
ORF1ab/nsp12140D140NGacAac11AY.650.000533
ORF1ab/nsp12140D140YGacTac11AY.650.000533
ORF1ab/nsp12140D140YGacTac11AY.660.00107
ORF1ab/nsp12140D140delGAC---11AY.670.000464
ORF1ab/nsp12140D140DgaCgaT11AY.680.000274
ORF1ab/nsp12140D140DgaCgaT11AY.690.000187
ORF1ab/nsp12140D140EgaCgaA11AY.7.10.000113
ORF1ab/nsp12140D140YGacTac11AY.7.20.000559
ORF1ab/nsp12140D140DgaCgaT11AY.700.000209
ORF1ab/nsp12140D140YGacTac11AY.830.001724
ORF1ab/nsp12140D140DgaCgaT11AY.890.004902
ORF1ab/nsp12140D140DgaCgaT11AY.90.000068
ORF1ab/nsp12140D140GgAcgGc11AY.98.10.000048
ORF1ab/nsp12140D140NGacAac11AY.990.001049
ORF1ab/nsp12140D140YGacTac11B0.000128
ORF1ab/nsp12140D140GgAcgGc11B.10.000009
ORF1ab/nsp12140D140AgAcgCc11B.10.000009
ORF1ab/nsp12140D140EgaCgaA11B.1.10.000018
ORF1ab/nsp12140D140delGAC---11B.1.1.10.000327
ORF1ab/nsp12140D140YGacTac11B.1.1.10.000327
ORF1ab/nsp12140D140DgaCgaT11B.1.1.10.000327
ORF1ab/nsp12140D140YGacTac11B.1.1.100.001115
ORF1ab/nsp12140D140DgaCgaT11B.1.1.1170.009709
ORF1ab/nsp12140D140DgaCgaT11B.1.1.1380.006061
ORF1ab/nsp12140D140delGAC---11B.1.1.1390.022727
ORF1ab/nsp12140D140DgaCgaT11B.1.1.1530.001095
ORF1ab/nsp12140D140DgaCgaT11B.1.1.1570.000913
ORF1ab/nsp12140D140DgaCgaT11B.1.1.1700.001247
ORF1ab/nsp12140D140DgaCgaT11B.1.1.1740.003378
ORF1ab/nsp12140D140DgaCgaT11B.1.1.1760.000439
ORF1ab/nsp12140D140YGacTac11B.1.1.1760.000439
ORF1ab/nsp12140D140DgaCgaT11B.1.1.1980.001468
ORF1ab/nsp12140D140YGacTac11B.1.1.2140.000055
ORF1ab/nsp12140D140DgaCgaT11B.1.1.2180.007692
ORF1ab/nsp12140D140GgAcgGc11B.1.1.2220.000204
ORF1ab/nsp12140D140DgaCgaT11B.1.1.2280.003049
ORF1ab/nsp12140D140delGAC---11B.1.1.2360.006897
ORF1ab/nsp12140D140YGacTac11B.1.1.2690.001353
ORF1ab/nsp12140D140YGacTac11B.1.1.2700.010309
ORF1ab/nsp12140D140DgaCgaT11B.1.1.2770.000759
ORF1ab/nsp12140D140YGacTac11B.1.1.280.000311
ORF1ab/nsp12140D140DgaCgaT11B.1.1.3000.010753
ORF1ab/nsp12140D140YGacTac11B.1.1.3060.000438
ORF1ab/nsp12140D140VgAcgTc11B.1.1.3180.000302
ORF1ab/nsp12140D140DgaCgaT11B.1.1.3280.016949
ORF1ab/nsp12140D140GgAcgGc11B.1.1.330.000421
ORF1ab/nsp12140D140YGacTac11B.1.1.3350.012987
ORF1ab/nsp12140D140DgaCgaT11B.1.1.3440.010753
ORF1ab/nsp12140D140delGAC---11B.1.1.3480.000796
ORF1ab/nsp12140D140YGacTac11B.1.1.390.00051
ORF1ab/nsp12140D140DgaCgaT11B.1.1.4020.011111
ORF1ab/nsp12140D140DgaCgaT11B.1.1.4130.006897
ORF1ab/nsp12140D140YGacTac11B.1.1.4160.000905
ORF1ab/nsp12140D140YGacTac11B.1.1.4210.030303
ORF1ab/nsp12140D140DgaCgaT11B.1.1.4210.030303
ORF1ab/nsp12140D140DgaCgaT11B.1.1.4260.035714
ORF1ab/nsp12140D140YGacTac11B.1.1.4340.000349
ORF1ab/nsp12140D140DgaCgaT11B.1.1.4480.002033
ORF1ab/nsp12140D140HGacCac11B.1.1.70.000001
ORF1ab/nsp12140D140YGacTac11B.1.1.930.025641
ORF1ab/nsp12140D140DgaCgaT11B.1.1.990.02381
ORF1ab/nsp12140D140YGacTac11B.1.1040.00369
ORF1ab/nsp12140D140DgaCgaT11B.1.1110.001175
ORF1ab/nsp12140D140DgaCgaT11B.1.1390.000733
ORF1ab/nsp12140D140DgaCgaT11B.1.1570.002985
ORF1ab/nsp12140D140DgaCgaT11B.1.160.260.002421
ORF1ab/nsp12140D140YGacTac11B.1.160.300.002976
ORF1ab/nsp12140D140DgaCgaT11B.1.160.90.007194
ORF1ab/nsp12140D140DgaCgaT11B.1.1700.00431
ORF1ab/nsp12140D140AgAcgCc11B.1.1770.000013
ORF1ab/nsp12140D140EgaCgaA11B.1.1770.000013
ORF1ab/nsp12140D140DgaCgaT11B.1.177.120.000152
ORF1ab/nsp12140D140DgaCgaT11B.1.177.150.000631
ORF1ab/nsp12140D140DgaCgaT11B.1.177.170.000821
ORF1ab/nsp12140D140DgaCgaT11B.1.177.320.00135
ORF1ab/nsp12140D140GgAcgGc11B.1.177.440.000519
ORF1ab/nsp12140D140DgaCgaT11B.1.177.440.000519
ORF1ab/nsp12140D140YGacTac11B.1.177.450.000381
ORF1ab/nsp12140D140YGacTac11B.1.177.460.000918
ORF1ab/nsp12140D140DgaCgaT11B.1.177.500.004695
ORF1ab/nsp12140D140YGacTac11B.1.177.560.000668
ORF1ab/nsp12140D140DgaCgaT11B.1.177.620.001192
ORF1ab/nsp12140D140YGacTac11B.1.177.70.000165
ORF1ab/nsp12140D140DgaCgaT11B.1.177.750.001041
ORF1ab/nsp12140D140YGacTac11B.1.177.750.001041
ORF1ab/nsp12140D140DgaCgaT11B.1.177.820.000477
ORF1ab/nsp12140D140GgACgGT11B.1.177.860.000183
ORF1ab/nsp12140D140DgaCgaT11B.1.1880.016667
ORF1ab/nsp12140D140VgACgTG11B.1.20.000009
ORF1ab/nsp12140D140AgAcgCc11B.1.2010.005682
ORF1ab/nsp12140D140DgaCgaT11B.1.2140.003663
ORF1ab/nsp12140D140HGacCac11B.1.2210.000071
ORF1ab/nsp12140D140DgaCgaT11B.1.2320.000537
ORF1ab/nsp12140D140VgAcgTc11B.1.2340.000132
ORF1ab/nsp12140D140DgaCgaT11B.1.2410.000812
ORF1ab/nsp12140D140NGacAac11B.1.2430.00007
ORF1ab/nsp12140D140GgAcgGc11B.1.2430.00007
ORF1ab/nsp12140D140YGacTac11B.1.2580.000067
ORF1ab/nsp12140D140NGacAac11B.1.2580.000067
ORF1ab/nsp12140D140YGacTac11B.1.258.170.000104
ORF1ab/nsp12140D140DgaCgaT11B.1.258.210.007752
ORF1ab/nsp12140D140DgaCgaT11B.1.2650.001271
ORF1ab/nsp12140D140DgaCgaT11B.1.3360.002439
ORF1ab/nsp12140D140DgaCgaT11B.1.3460.001311
ORF1ab/nsp12140D140AgAcgCc11B.1.3510.00003
ORF1ab/nsp12140D140YGacTac11B.1.351.20.000303
ORF1ab/nsp12140D140DgaCgaT11B.1.351.20.000303
ORF1ab/nsp12140D140DgaCgaT11B.1.351.50.0006
ORF1ab/nsp12140D140YGacTac11B.1.360.000146
ORF1ab/nsp12140D140AgAcgCc11B.1.360.000146
ORF1ab/nsp12140D140YGacTac11B.1.36.10.00114
ORF1ab/nsp12140D140DgaCgaT11B.1.36.10.00114
ORF1ab/nsp12140D140DgaCgaT11B.1.36.170.000494
ORF1ab/nsp12140D140DgaCgaT11B.1.36.220.001208
ORF1ab/nsp12140D140DgaCgaT11B.1.36.270.000763
ORF1ab/nsp12140D140del1gaCga-11B.1.36.290.000517
ORF1ab/nsp12140D140DgaCgaT11B.1.36.310.001751
ORF1ab/nsp12140D140DgaCgaT11B.1.36.90.003215
ORF1ab/nsp12140D140YGacTac11B.1.3660.004878
ORF1ab/nsp12140D140DgaCgaT11B.1.3670.000792
ORF1ab/nsp12140D140DgaCgaT11B.1.3910.001127
ORF1ab/nsp12140D140DgaCgaT11B.1.3980.002976
ORF1ab/nsp12140D140GgAcgGc11B.1.4000.000429
ORF1ab/nsp12140D140DgaCgaT11B.1.4150.014286
ORF1ab/nsp12140D140DgaCgaT11B.1.416.10.001563
ORF1ab/nsp12140D140YGacTac11B.1.4280.00102
ORF1ab/nsp12140D140DgaCgaT11B.1.4360.001029
ORF1ab/nsp12140D140DgaCgaT11B.1.4590.004082
ORF1ab/nsp12140D140DgaCgaT11B.1.4740.001901
ORF1ab/nsp12140D140YGacTac11B.1.5090.000866
ORF1ab/nsp12140D140DgaCgaT11B.1.5240.001406
ORF1ab/nsp12140D140GgAcgGc11B.1.5260.000024
ORF1ab/nsp12140D140DgaCgaT11B.1.5440.006024
ORF1ab/nsp12140D140DgaCgaT11B.1.5500.013699
ORF1ab/nsp12140D140GgAcgGc11B.1.5510.00129
ORF1ab/nsp12140D140DgaCgaT11B.1.5610.000397
ORF1ab/nsp12140D140del1Gac-ac11B.1.5770.000687
ORF1ab/nsp12140D140DgaCgaT11B.1.5870.001898
ORF1ab/nsp12140D140NGacAac11B.1.5960.000087
ORF1ab/nsp12140D140DgaCgaT11B.1.596.10.009346
ORF1ab/nsp12140D140AgAcgCc11B.1.617.20.000004
ORF1ab/nsp12140D140DgaCgaT11B.1.6280.000352
ORF1ab/nsp12140D140DgaCgaT11B.1.6320.006711
ORF1ab/nsp12140D140DgaCgaT11B.1.6340.003425
ORF1ab/nsp12140D140DgaCgaT11B.1.6360.006711
ORF1ab/nsp12140D140DgaCgaT11B.1.930.000934
ORF1ab/nsp12140D140YGacTac11B.120.00641
ORF1ab/nsp12140D140DgaCgaT11B.230.002924
ORF1ab/nsp12140D140DgaCgaT11B.290.003509
ORF1ab/nsp12140D140YGacTac11B.30.000831
ORF1ab/nsp12140D140DgaCgaT11B.30.000831
ORF1ab/nsp12140D140delGAC---11B.340.013699
ORF1ab/nsp12140D140DgaCgaT11B.40.002208
ORF1ab/nsp12140D140GgAcgGc11B.60.00091
ORF1ab/nsp12140D140DgaCgaT11B.60.00091
ORF1ab/nsp12140D140DgaCgaT11B.6.60.000889
ORF1ab/nsp12140D140AgAcgCc11C.1.20.004255
ORF1ab/nsp12140D140DgaCgaT11C.160.00106
ORF1ab/nsp12140D140EgaCgaA11C.230.005814
ORF1ab/nsp12140D140YGacTac11C.350.000774
ORF1ab/nsp12140D140DgaCgaT11C.350.000774
ORF1ab/nsp12140D140YGacTac11C.36.30.000567
ORF1ab/nsp12140D140DgaCgaT11C.36.3.10.002717
ORF1ab/nsp12140D140YGacTac11C.370.000116
ORF1ab/nsp12140D140NGacAac11C.370.000116
ORF1ab/nsp12140D140DgaCgaT11C.380.008065
ORF1ab/nsp12140D140DgaCgaT11C.390.018868
ORF1ab/nsp12140D140HGacCac11D.20.000075
ORF1ab/nsp12140D140del2gACg--11D.20.000075
ORF1ab/nsp12140D140YGacTac11D.20.000075
ORF1ab/nsp12140D140HGacCac11D.30.005917
ORF1ab/nsp12140D140YGacTac11N.30.005814
ORF1ab/nsp12140D140DgaCgaT11N.50.001767
ORF1ab/nsp12140D140VgACgTT11P.10.000016
ORF1ab/nsp12140D140GgACgGT11P.1.100.000269
ORF1ab/nsp12140D140delGAC---11Q.10.000126
ORF1ab/nsp12140D140YGacTac11Q.30.000145
ORF1ab/nsp12140D140DgaCgaT11W.10.008696