CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp10 : Mut = Y30C

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1030Y30CY4283CnonsyntAttGt59580.98305113112-13114
ORF1ab/nsp1030Y30CY4283CnonsyntATtGC5910.016949213112-13114

Details of the mutation Y30C within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1030Y30CtAttGt5859All0.000011
ORF1ab/nsp1030Y30CtATtGC159All0
ORF1ab/nsp1030Y30CtAttGt1313B.1.1.70.000012
ORF1ab/nsp1030Y30CtAttGt1212AY.470.000373
ORF1ab/nsp1030Y30CtAttGt55B.1.1770.000066
ORF1ab/nsp1030Y30CtAttGt44B.1.10.000073
ORF1ab/nsp1030Y30CtAttGt33AY.40.000005
ORF1ab/nsp1030Y30CtAttGt33B.1.1.5190.000119
ORF1ab/nsp1030Y30CtAttGt220.111111
ORF1ab/nsp1030Y30CtAttGt22AY.1000.000092
ORF1ab/nsp1030Y30CtAttGt12AY.1170.000085
ORF1ab/nsp1030Y30CtATtGC12AY.1170.000085
ORF1ab/nsp1030Y30CtAttGt11AY.1090.00074
ORF1ab/nsp1030Y30CtAttGt11AY.130.000161
ORF1ab/nsp1030Y30CtAttGt11AY.260.000028
ORF1ab/nsp1030Y30CtAttGt11AY.30.00001
ORF1ab/nsp1030Y30CtAttGt11AY.430.000004
ORF1ab/nsp1030Y30CtAttGt11AY.440.000006
ORF1ab/nsp1030Y30CtAttGt11AY.50.000021
ORF1ab/nsp1030Y30CtAttGt11AY.550.000917
ORF1ab/nsp1030Y30CtAttGt11B.10.000009
ORF1ab/nsp1030Y30CtAttGt11B.1.177.210.000076
ORF1ab/nsp1030Y30CtAttGt11B.1.2210.000071
ORF1ab/nsp1030Y30CtAttGt11B.1.3510.00003
ORF1ab/nsp1030Y30CtAttGt11B.1.617.20.000004