CoV-GLUE | Mutations | Mutation

CoV-GLUE Mutation: ORF = ORF1ab/nsp10 : Mut = T12del2

Details of the codons used for the mutation across all lineages (CodonProp is the proportion each codon is used for this AA mutation):

ORFCodonNumMutORF1abMutMutTypeRefCodonMutCodonAACountCodonCountCodonPropGenome Position
ORF1ab/nsp1012T12del2T4265del2delaCTa--430.7513058-13060
ORF1ab/nsp1012T12del2T4265del2delACt--t410.2513058-13060

Details of the mutation T12del2 within lineages (LineageCodonProp is the proportion the codon is observed at, at this particular site, on each lineage):

ORFCodonNumMutRefCodonMutCodonCodonCountAACountLineageLineageCodonProp
ORF1ab/nsp1012T12del2aCTa--34All0.000001
ORF1ab/nsp1012T12del2ACt--t14All0
ORF1ab/nsp1012T12del2aCTa--11AY.1200.000037
ORF1ab/nsp1012T12del2aCTa--11B.1.1.3720.000689
ORF1ab/nsp1012T12del2ACt--t11B.1.2060.000816
ORF1ab/nsp1012T12del2aCTa--11B.1.617.20.000004